RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 CTAGE5O15320 804 aa10.52□□□□□ -0.73
CAPN3-219ENST00000569136 ADCY6O43306 1168 aa10.52□□□□□ -0.73
CAPN3-219ENST00000569136 PPFIA4O75335 1185 aa10.52□□□□□ -0.73
CAPN3-219ENST00000569136 GH1P01241 217 aa10.52□□□□□ -0.73
CAPN3-219ENST00000569136 GNA11P29992 359 aa10.52□□□□□ -0.73
CAPN3-219ENST00000569136 CDC27P30260 824 aa10.52□□□□□ -0.73
CAPN3-219ENST00000569136 CDK7P50613 346 aa10.52□□□□□ -0.73
CAPN3-219ENST00000569136 TLE2Q04725 743 aa10.52□□□□□ -0.73
CAPN3-219ENST00000569136 TOB2Q14106 344 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-219ENST00000569136 PFKFB3Q16875 520 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-219ENST00000569136 PCNX4Q63HM2 1172 aa10.52□□□□□ -0.73
CAPN3-219ENST00000569136 USP17L6PQ6QN14 398 aa10.52□□□□□ -0.73
CAPN3-219ENST00000569136 TRIM22Q8IYM9 498 aa10.52□□□□□ -0.73
CAPN3-219ENST00000569136 C7orf61Q8IZ16 206 aa10.52□□□□□ -0.73
CAPN3-219ENST00000569136 OR6J1Q8NGC5 347 aa10.52□□□□□ -0.73
CAPN3-219ENST00000569136 LENG1Q96BZ8 264 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-219ENST00000569136 CDHR1Q96JP9 859 aa10.52□□□□□ -0.73
CAPN3-219ENST00000569136 ZNF358Q9NW07 568 aa10.52□□□□□ -0.73
CAPN3-219ENST00000569136 DDX41Q9UJV9 622 aaKnown RBP10.52□□□□□ -0.73
CAPN3-219ENST00000569136 ATP11BQ9Y2G3 1177 aa10.52□□□□□ -0.73
CAPN3-219ENST00000569136 MRVI1Q9Y6F6 885 aa10.52□□□□□ -0.73
CAPN3-219ENST00000569136 DDX49Q9Y6V7 483 aaKnown RBP10.52□□□□□ -0.73
CAPN3-219ENST00000569136 MROH7Q68CQ1 1323 aa10.52□□□□□ -0.73
CAPN3-219ENST00000569136 hCG_1642624A0A1W2PR95 340 aa10.51□□□□□ -0.73
CAPN3-219ENST00000569136 TMEM229AB2RXF0 380 aa10.51□□□□□ -0.73
CAPN3-219ENST00000569136 BACH1O14867 736 aa10.51□□□□□ -0.73
CAPN3-219ENST00000569136 CDKL5O76039 1030 aa10.51□□□□□ -0.73
CAPN3-219ENST00000569136 SCG2P13521 617 aa10.51□□□□□ -0.73
CAPN3-219ENST00000569136 SNRPBP14678 240 aaKnown RBP10.51□□□□□ -0.73
CAPN3-219ENST00000569136 ICAM3P32942 547 aa10.51□□□□□ -0.73
CAPN3-219ENST00000569136 BMP8BP34820 402 aa10.51□□□□□ -0.73
CAPN3-219ENST00000569136 ADCY7P51828 1080 aa10.51□□□□□ -0.73
CAPN3-219ENST00000569136 NAPAP54920 295 aa10.51□□□□□ -0.73
CAPN3-219ENST00000569136 CENPCQ03188 943 aa10.51□□□□□ -0.73
CAPN3-219ENST00000569136 SSRP1Q08945 709 aaKnown RBP10.51□□□□□ -0.73
CAPN3-219ENST00000569136 DPYDQ12882 1025 aa10.51□□□□□ -0.73
CAPN3-219ENST00000569136 PTK7Q13308 1070 aa10.51□□□□□ -0.73
CAPN3-219ENST00000569136 NEDD9Q14511 834 aa10.51□□□□□ -0.73
CAPN3-219ENST00000569136 NTRK3Q16288 839 aa10.51□□□□□ -0.73
CAPN3-219ENST00000569136 WWC2Q6AWC2 1192 aa10.51□□□□□ -0.73
CAPN3-219ENST00000569136 ZNF787Q6DD87 383 aa10.51□□□□□ -0.73
CAPN3-219ENST00000569136 PRICKLE2Q7Z3G6 844 aa10.51□□□□□ -0.73
CAPN3-219ENST00000569136 NLRX1Q86UT6 975 aa10.51□□□□□ -0.73
CAPN3-219ENST00000569136 SLC43A3Q8NBI5 491 aa10.51□□□□□ -0.73
CAPN3-219ENST00000569136 GIMAP8Q8ND71 665 aaPredicted RBP10.51□□□□□ -0.73
CAPN3-219ENST00000569136 BICD2Q8TD16 824 aa10.51□□□□□ -0.73
CAPN3-219ENST00000569136 LBHD1Q9BQE6 289 aaPredicted RBP10.51□□□□□ -0.73
CAPN3-219ENST00000569136 SENP7Q9BQF6 1050 aa10.51□□□□□ -0.73
CAPN3-219ENST00000569136 MTG1Q9BT17 334 aaPredicted RBP10.51□□□□□ -0.73
CAPN3-219ENST00000569136 RNF26Q9BY78 433 aaPredicted RBP10.51□□□□□ -0.73
CAPN3-219ENST00000569136 UPF3BQ9BZI7 483 aaKnown RBP10.51□□□□□ -0.73
CAPN3-219ENST00000569136 SLKQ9H2G2 1235 aaPredicted RBP10.51□□□□□ -0.73
CAPN3-219ENST00000569136 C6orf50Q9HD87 102 aa10.51□□□□□ -0.73
CAPN3-219ENST00000569136 SH3GLB2Q9NR46 395 aa10.51□□□□□ -0.73
CAPN3-219ENST00000569136 NOVA2Q9UNW9 492 aaKnown RBP10.51□□□□□ -0.73
CAPN3-219ENST00000569136 A0A1W2PPC1 479 aa10.5□□□□□ -0.73
CAPN3-219ENST00000569136 ESYT2A0FGR8 921 aa10.5□□□□□ -0.73
CAPN3-219ENST00000569136 MYADML2A6NDP7 307 aa10.5□□□□□ -0.73
CAPN3-219ENST00000569136 SPATA31C2B4DYI2 1134 aa10.5□□□□□ -0.73
CAPN3-219ENST00000569136 TLR3O15455 904 aaKnown RBP10.5□□□□□ -0.73
CAPN3-219ENST00000569136 SUPT20HL2P0C7V6 817 aa10.5□□□□□ -0.73
CAPN3-219ENST00000569136 BEX3Q00994 111 aa10.5□□□□□ -0.73
CAPN3-219ENST00000569136 ITGA7Q13683 1181 aa10.5□□□□□ -0.73
CAPN3-219ENST00000569136 DGKDQ16760 1214 aa10.5□□□□□ -0.73
CAPN3-219ENST00000569136 LY6KQ17RY6 165 aa10.5□□□□□ -0.73
CAPN3-219ENST00000569136 TRIM60Q495X7 471 aa10.5□□□□□ -0.73
CAPN3-219ENST00000569136 CELF3Q5SZQ8 465 aaKnown RBP10.5□□□□□ -0.73
CAPN3-219ENST00000569136 FOXD4L5Q5VV16 416 aaPredicted RBP10.5□□□□□ -0.73
CAPN3-219ENST00000569136 TMEM214Q6NUQ4 689 aaKnown RBP10.5□□□□□ -0.73
CAPN3-219ENST00000569136 CXCL17Q6UXB2 119 aa10.5□□□□□ -0.73
CAPN3-219ENST00000569136 ANKMY2Q8IV38 441 aa10.5□□□□□ -0.73
CAPN3-219ENST00000569136 DHX37Q8IY37 1157 aaKnown RBP10.5□□□□□ -0.73
CAPN3-219ENST00000569136 INPP4AQ96PE3 977 aaPredicted RBP10.5□□□□□ -0.73
CAPN3-219ENST00000569136 ZMYND12Q9H0C1 365 aa10.5□□□□□ -0.73
CAPN3-219ENST00000569136 MLXIPQ9HAP2 919 aa10.5□□□□□ -0.73
CAPN3-219ENST00000569136 TMEM39AQ9NV64 488 aa10.5□□□□□ -0.73
CAPN3-219ENST00000569136 ZMYND8Q9ULU4 1186 aaPredicted RBP10.5□□□□□ -0.73
CAPN3-219ENST00000569136 PCDHA6Q9UN73 950 aa10.5□□□□□ -0.73
CAPN3-219ENST00000569136 PCDHA8Q9Y5H6 950 aa10.5□□□□□ -0.73
CAPN3-219ENST00000569136 FRMPD4Q14CM0 1322 aa10.5□□□□□ -0.73
CAPN3-219ENST00000569136 CNTNAP5Q8WYK1 1306 aa10.5□□□□□ -0.73
CAPN3-219ENST00000569136 NID2Q14112 1375 aa10.5□□□□□ -0.73
CAPN3-219ENST00000569136 BAZ2BQ9UIF8 2168 aaKnown RBP10.49□□□□□ -0.73
CAPN3-219ENST00000569136 STXBP3O00186 592 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 KIAA0355O15063 1070 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 FIBPO43427 364 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 PFKFB2O60825 505 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 PQBP1O60828 265 aaKnown RBP10.49□□□□□ -0.73
CAPN3-219ENST00000569136 MYL3P08590 195 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 CLTBP09497 229 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 RNF144AP50876 292 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-219ENST00000569136 NEK4P51957 841 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 SEC13P55735 322 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 CCT2P78371 535 aaKnown RBP10.49□□□□□ -0.73
CAPN3-219ENST00000569136 MRPS9P82933 396 aaKnown RBP10.49□□□□□ -0.73
CAPN3-219ENST00000569136 PURAQ00577 322 aaKnown RBP10.49□□□□□ -0.73
CAPN3-219ENST00000569136 PTPN11Q06124 597 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-219ENST00000569136 ARHGAP1Q07960 439 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 AP3B2Q13367 1082 aa10.49□□□□□ -0.73
CAPN3-219ENST00000569136 PKN1Q16512 942 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms