RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 CLUL1Q15846 466 aa18.02■□□□□ 0.48
HERPUD1-215ENST00000568676 SMRP1Q8NCR6 262 aa18.02■□□□□ 0.48
HERPUD1-215ENST00000568676 SPPL3Q8TCT6 385 aa18.02■□□□□ 0.48
HERPUD1-215ENST00000568676 LINC01599Q8WXQ3 324 aa18.02■□□□□ 0.48
HERPUD1-215ENST00000568676 SDF4Q9BRK5 362 aa18.02■□□□□ 0.48
HERPUD1-215ENST00000568676 MYL10Q9BUA6 226 aa18.02■□□□□ 0.48
HERPUD1-215ENST00000568676 CELF4Q9BZC1 486 aaKnown RBP18.02■□□□□ 0.48
HERPUD1-215ENST00000568676 FAM49AQ9H0Q0 323 aaPredicted RBP18.02■□□□□ 0.48
HERPUD1-215ENST00000568676 AAASQ9NRG9 546 aa18.02■□□□□ 0.48
HERPUD1-215ENST00000568676 MUTYHQ9UIF7 546 aa18.02■□□□□ 0.48
HERPUD1-215ENST00000568676 LRFN2Q9ULH4 789 aa18.02■□□□□ 0.48
HERPUD1-215ENST00000568676 PADI3Q9ULW8 664 aa18.02■□□□□ 0.48
HERPUD1-215ENST00000568676 ATG2AQ2TAZ0 1938 aa18.02■□□□□ 0.47
HERPUD1-215ENST00000568676 PLEKHA8P1O95397 391 aa18.01■□□□□ 0.47
HERPUD1-215ENST00000568676 PDE4AP27815 886 aa18.01■□□□□ 0.47
HERPUD1-215ENST00000568676 RTN4RL1Q86UN2 441 aaPredicted RBP18.01■□□□□ 0.47
HERPUD1-215ENST00000568676 KLHL23Q8NBE8 558 aa18.01■□□□□ 0.47
HERPUD1-215ENST00000568676 MXRA8Q9BRK3 442 aa18.01■□□□□ 0.47
HERPUD1-215ENST00000568676 KCNH7Q9NS40 1196 aa18.01■□□□□ 0.47
HERPUD1-215ENST00000568676 RBM8AQ9Y5S9 174 aaKnown RBP18.01■□□□□ 0.47
HERPUD1-215ENST00000568676 SH2B2O14492 632 aaPredicted RBP18■□□□□ 0.47
HERPUD1-215ENST00000568676 LINC01565O15544 149 aa18■□□□□ 0.47
HERPUD1-215ENST00000568676 FOSP01100 380 aaPredicted RBP18■□□□□ 0.47
HERPUD1-215ENST00000568676 GTF2F1P35269 517 aaKnown RBP eCLIP18■□□□□ 0.47
HERPUD1-215ENST00000568676 STAT5BP51692 787 aa18■□□□□ 0.47
HERPUD1-215ENST00000568676 KRT76Q01546 638 aa18■□□□□ 0.47
HERPUD1-215ENST00000568676 PDE12Q6L8Q7 609 aaKnown RBP18■□□□□ 0.47
HERPUD1-215ENST00000568676 POF1BQ8WVV4 589 aa18■□□□□ 0.47
HERPUD1-215ENST00000568676 PCYT2Q99447 389 aa18■□□□□ 0.47
HERPUD1-215ENST00000568676 PKD2L1Q9P0L9 805 aa18■□□□□ 0.47
HERPUD1-215ENST00000568676 PCDHB12Q9Y5F1 795 aa18■□□□□ 0.47
HERPUD1-215ENST00000568676 SLC12A7Q9Y666 1083 aa18■□□□□ 0.47
HERPUD1-215ENST00000568676 MYO7AQ13402 2215 aa17.99■□□□□ 0.47
HERPUD1-215ENST00000568676 DNAJB1P25685 340 aa17.99■□□□□ 0.47
HERPUD1-215ENST00000568676 SARSP49591 514 aaKnown RBP17.99■□□□□ 0.47
HERPUD1-215ENST00000568676 ACTR2P61160 394 aa17.99■□□□□ 0.47
HERPUD1-215ENST00000568676 CBX2Q14781 532 aaPredicted RBP17.99■□□□□ 0.47
HERPUD1-215ENST00000568676 PLCB4Q15147 1175 aa17.99■□□□□ 0.47
HERPUD1-215ENST00000568676 UBE2SQ16763 222 aa17.99■□□□□ 0.47
HERPUD1-215ENST00000568676 PPP1R18Q6NYC8 613 aa17.99■□□□□ 0.47
HERPUD1-215ENST00000568676 CDCA3Q99618 268 aaPredicted RBP17.99■□□□□ 0.47
HERPUD1-215ENST00000568676 C1orf112Q9NSG2 853 aa17.99■□□□□ 0.47
HERPUD1-215ENST00000568676 CLEC1BQ9P126 229 aa17.99■□□□□ 0.47
HERPUD1-215ENST00000568676 PCDHB7Q9Y5E2 793 aa17.99■□□□□ 0.47
HERPUD1-215ENST00000568676 LOC730098B7Z3J9 87 aa17.98■□□□□ 0.47
HERPUD1-215ENST00000568676 ATG7O95352 703 aa17.98■□□□□ 0.47
HERPUD1-215ENST00000568676 NRIP1P48552 1158 aa17.98■□□□□ 0.47
HERPUD1-215ENST00000568676 MTHFD1LQ6UB35 978 aa17.98■□□□□ 0.47
HERPUD1-215ENST00000568676 TRIM67Q6ZTA4 783 aa17.98■□□□□ 0.47
HERPUD1-215ENST00000568676 TMTC3Q6ZXV5 915 aa17.98■□□□□ 0.47
HERPUD1-215ENST00000568676 HEATR3Q7Z4Q2 680 aa17.98■□□□□ 0.47
HERPUD1-215ENST00000568676 FANCBQ8NB91 859 aa17.98■□□□□ 0.47
HERPUD1-215ENST00000568676 GLT8D2Q9H1C3 349 aa17.98■□□□□ 0.47
HERPUD1-215ENST00000568676 COL1A2P08123 1366 aa17.98■□□□□ 0.47
HERPUD1-215ENST00000568676 hCG_1984214I3L0E3 225 aa17.97■□□□□ 0.47
HERPUD1-215ENST00000568676 HBP1O60381 514 aa17.97■□□□□ 0.47
HERPUD1-215ENST00000568676 SRGAP2BP0DMP2 458 aa17.97■□□□□ 0.47
HERPUD1-215ENST00000568676 ATF7P17544 494 aaPredicted RBP17.97■□□□□ 0.47
HERPUD1-215ENST00000568676 PTPN5P54829 565 aa17.97■□□□□ 0.47
HERPUD1-215ENST00000568676 TMEM62Q0P6H9 643 aa17.97■□□□□ 0.47
HERPUD1-215ENST00000568676 PAN2Q504Q3 1202 aaKnown RBP17.97■□□□□ 0.47
HERPUD1-215ENST00000568676 CEP55Q53EZ4 464 aa17.97■□□□□ 0.47
HERPUD1-215ENST00000568676 SYNE3Q6ZMZ3 975 aa17.97■□□□□ 0.47
HERPUD1-215ENST00000568676 ADGRD2Q7Z7M1 963 aa17.97■□□□□ 0.47
HERPUD1-215ENST00000568676 SGMS1Q86VZ5 419 aa17.97■□□□□ 0.47
HERPUD1-215ENST00000568676 CMTR1Q8N1G2 835 aaKnown RBP17.97■□□□□ 0.47
HERPUD1-215ENST00000568676 ZNF713Q8N859 430 aaPredicted RBP17.97■□□□□ 0.47
HERPUD1-215ENST00000568676 PHF7Q9BWX1 381 aaPredicted RBP17.97■□□□□ 0.47
HERPUD1-215ENST00000568676 TLE6Q9H808 572 aa17.97■□□□□ 0.47
HERPUD1-215ENST00000568676 ZNF318Q5VUA4 2279 aa17.96■□□□□ 0.47
HERPUD1-215ENST00000568676 IGKV6D-21A0A0A0MT36 114 aa17.96■□□□□ 0.47
HERPUD1-215ENST00000568676 TMEM221A6NGB7 291 aa17.96■□□□□ 0.47
HERPUD1-215ENST00000568676 M0R296 226 aa17.96■□□□□ 0.47
HERPUD1-215ENST00000568676 GPR182O15218 404 aa17.96■□□□□ 0.47
HERPUD1-215ENST00000568676 RPS6KA5O75582 802 aa17.96■□□□□ 0.47
HERPUD1-215ENST00000568676 CSPG5O95196 566 aa17.96■□□□□ 0.47
HERPUD1-215ENST00000568676 NFX1Q12986 1120 aaKnown RBP17.96■□□□□ 0.47
HERPUD1-215ENST00000568676 AP3B2Q13367 1082 aa17.96■□□□□ 0.47
HERPUD1-215ENST00000568676 FAM160B1Q5W0V3 765 aa17.96■□□□□ 0.47
HERPUD1-215ENST00000568676 SLC24A5Q71RS6 500 aa17.96■□□□□ 0.47
HERPUD1-215ENST00000568676 NIPA1Q7RTP0 329 aa17.96■□□□□ 0.47
HERPUD1-215ENST00000568676 SUGP1Q8IWZ8 645 aaKnown RBP17.96■□□□□ 0.47
HERPUD1-215ENST00000568676 MICAL1Q8TDZ2 1067 aa17.96■□□□□ 0.47
HERPUD1-215ENST00000568676 PBXIP1Q96AQ6 731 aa17.96■□□□□ 0.47
HERPUD1-215ENST00000568676 TMX1Q9H3N1 280 aa17.96■□□□□ 0.47
HERPUD1-215ENST00000568676 RIC8AQ9NPQ8 531 aa17.96■□□□□ 0.47
HERPUD1-215ENST00000568676 TLR9Q9NR96 1032 aa17.96■□□□□ 0.47
HERPUD1-215ENST00000568676 RGS18Q9NS28 235 aa17.96■□□□□ 0.47
HERPUD1-215ENST00000568676 RBM28Q9NW13 759 aaKnown RBP17.96■□□□□ 0.47
HERPUD1-215ENST00000568676 DENND3A2RUS2 1198 aa17.95■□□□□ 0.46
HERPUD1-215ENST00000568676 RXRAP19793 462 aa17.95■□□□□ 0.46
HERPUD1-215ENST00000568676 ZXDAP98168 799 aa17.95■□□□□ 0.46
HERPUD1-215ENST00000568676 ZNF484Q5JVG2 852 aa17.95■□□□□ 0.46
HERPUD1-215ENST00000568676 SPOUT1Q5T280 376 aaKnown RBP17.95■□□□□ 0.46
HERPUD1-215ENST00000568676 ATP8B4Q8TF62 1192 aa17.95■□□□□ 0.46
HERPUD1-215ENST00000568676 TRAPPC12Q8WVT3 735 aa17.95■□□□□ 0.46
HERPUD1-215ENST00000568676 ZBTB10Q96DT7 871 aa17.95■□□□□ 0.46
HERPUD1-215ENST00000568676 AGO4Q9HCK5 861 aaKnown RBP17.95■□□□□ 0.46
HERPUD1-215ENST00000568676 ERVK-5Q9HDB9 667 aa17.95■□□□□ 0.46
HERPUD1-215ENST00000568676 LZTS1Q9Y250 596 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms