RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 UBA7P41226 1012 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 UBE2HP62256 183 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 BEX3Q00994 111 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 FSCN1Q16658 493 aaKnown RBP9.48□□□□□ -0.89
SF3B3-212ENST00000568539 UGCGQ16739 394 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 DGKDQ16760 1214 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 HABP4Q5JVS0 413 aaKnown RBP9.48□□□□□ -0.89
SF3B3-212ENST00000568539 HYIQ5T013 277 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 HAUS3Q68CZ6 603 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 SWSAP1Q6NVH7 229 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 CATSPER3Q86XQ3 398 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 CCDC60Q8IWA6 550 aaPredicted RBP9.48□□□□□ -0.89
SF3B3-212ENST00000568539 BANK1Q8NDB2 785 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 AFAP1L1Q8TED9 768 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 MRPS27Q92552 414 aaKnown RBP9.48□□□□□ -0.89
SF3B3-212ENST00000568539 DYDC2Q96IM9 177 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 PNMA5Q96PV4 448 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 RNF208Q9H0X6 261 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 GOLPH3LQ9H4A5 285 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 SPC25Q9HBM1 224 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 SLC24A3Q9HC58 644 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 TUFT1Q9NNX1 390 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 LMBRD1Q9NUN5 540 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 FAM13BQ9NYF5 915 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 WRAP73Q9P2S5 460 aaPredicted RBP9.48□□□□□ -0.89
SF3B3-212ENST00000568539 GABBR1Q9UBS5 961 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 HPSEQ9Y251 543 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 MAFBQ9Y5Q3 323 aaPredicted RBP9.48□□□□□ -0.89
SF3B3-212ENST00000568539 EMSYQ7Z589 1322 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 IGSF9BQ9UPX0 1349 aa9.48□□□□□ -0.89
SF3B3-212ENST00000568539 A0A0C4DFX4 3053 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 A0A087X0B3 334 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 A0A1B0GVL5 298 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 POTEB3A0JP26 581 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 BACH1O14867 736 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 ZNF862O60290 1169 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 LYPLA2O95372 231 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 LGALS2P05162 132 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 PFKFB1P16118 471 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 MUTP22033 750 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 TXLNAP40222 546 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 QARSP47897 775 aaKnown RBP9.47□□□□□ -0.89
SF3B3-212ENST00000568539 STAT5BP51692 787 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 NDUFA8P51970 172 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 PSMC5P62195 406 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 CYP4A11Q02928 519 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 GRB10Q13322 594 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 CTTNQ14247 550 aaKnown RBP9.47□□□□□ -0.89
SF3B3-212ENST00000568539 KARSQ15046 597 aaKnown RBP9.47□□□□□ -0.89
SF3B3-212ENST00000568539 ECM1Q16610 540 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 TMEM119Q4V9L6 283 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 BRDTQ58F21 947 aaPredicted RBP9.47□□□□□ -0.89
SF3B3-212ENST00000568539 GNASQ5JWF2 1037 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 UTP14CQ5TAP6 766 aaKnown RBP9.47□□□□□ -0.89
SF3B3-212ENST00000568539 FAM160B1Q5W0V3 765 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 CCSAPQ6IQ19 270 aaPredicted RBP9.47□□□□□ -0.89
SF3B3-212ENST00000568539 POTEBQ6S5H4 581 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 PLPPR4Q7Z2D5 763 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 TRIM50Q86XT4 487 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 FSIP1Q8NA03 581 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 KLHDC9Q8NEP7 349 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 ATP6V0A1Q93050 837 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 DEFB118Q96PH6 123 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 LXNQ9BS40 222 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 C16orf70Q9BSU1 422 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 SMARCAD1Q9H4L7 1026 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 ZSWIM4Q9H7M6 989 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 ZNF302Q9NR11 478 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 KDM3AQ9Y4C1 1321 aa9.47□□□□□ -0.89
SF3B3-212ENST00000568539 ZNFX1Q9P2E3 1918 aaKnown RBP9.46□□□□□ -0.89
SF3B3-212ENST00000568539 MYH15Q9Y2K3 1946 aa9.46□□□□□ -0.89
SF3B3-212ENST00000568539 KPNA6O60684 536 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 STBD1O95210 358 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 F2P00734 622 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 GJB1P08034 283 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 ZNF286BP0CG31 522 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 PLCG1P19174 1290 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 ATP4AP20648 1035 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 SLC26A2P50443 739 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 PURAQ00577 322 aaKnown RBP9.46□□□□□ -0.9
SF3B3-212ENST00000568539 PRKCEQ02156 737 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 LRRC41Q15345 812 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 PDXDC2PQ6P474 469 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 POTEGQ6S5H5 508 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 KCNK18Q7Z418 384 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 RNF180Q86T96 592 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 TPH2Q8IWU9 490 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 C4orf19Q8IY42 314 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 KCTD17Q8N5Z5 321 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 ENGASEQ8NFI3 743 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 SLC39A7Q92504 469 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 KAT2BQ92831 832 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 GLG1Q92896 1179 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 CALML4Q96GE6 196 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 PLIN2Q99541 437 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 NT5C3AQ9H0P0 336 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 AZI2Q9H6S1 392 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 DDX19AQ9NUU7 478 aaKnown RBP9.46□□□□□ -0.9
SF3B3-212ENST00000568539 CCDC39Q9UFE4 941 aa9.46□□□□□ -0.9
SF3B3-212ENST00000568539 OGDHLQ9ULD0 1010 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms