RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 CHMP4BP1P59074 171 aa17.59■□□□□ 0.41
SPG7-218ENST00000568205 ZRSR1Q15695 479 aaKnown RBP17.59■□□□□ 0.41
SPG7-218ENST00000568205 ECM1Q16610 540 aa17.59■□□□□ 0.41
SPG7-218ENST00000568205 XKR3Q5GH77 459 aa17.59■□□□□ 0.41
SPG7-218ENST00000568205 HYIQ5T013 277 aa17.59■□□□□ 0.41
SPG7-218ENST00000568205 RESP18Q5W5W9 173 aa17.59■□□□□ 0.41
SPG7-218ENST00000568205 POTEGQ6S5H5 508 aa17.59■□□□□ 0.41
SPG7-218ENST00000568205 VTI1AQ96AJ9 217 aa17.59■□□□□ 0.41
SPG7-218ENST00000568205 CALML4Q96GE6 196 aa17.59■□□□□ 0.41
SPG7-218ENST00000568205 RNPEPQ9H4A4 650 aa17.59■□□□□ 0.41
SPG7-218ENST00000568205 STARD7Q9NQZ5 370 aa17.59■□□□□ 0.41
SPG7-218ENST00000568205 TRPC6Q9Y210 931 aa17.59■□□□□ 0.41
SPG7-218ENST00000568205 A0A1W2PQ27 194 aa17.58■□□□□ 0.4
SPG7-218ENST00000568205 A0A1W2PQ64 194 aa17.58■□□□□ 0.4
SPG7-218ENST00000568205 A0A1W2PQD8 194 aa17.58■□□□□ 0.4
SPG7-218ENST00000568205 CCDC85CA6NKD9 419 aa17.58■□□□□ 0.4
SPG7-218ENST00000568205 STBD1O95210 358 aa17.58■□□□□ 0.4
SPG7-218ENST00000568205 GRB10Q13322 594 aa17.58■□□□□ 0.4
SPG7-218ENST00000568205 KARSQ15046 597 aaKnown RBP17.58■□□□□ 0.4
SPG7-218ENST00000568205 NBPF20Q3BBV1 942 aa17.58■□□□□ 0.4
SPG7-218ENST00000568205 TMEM119Q4V9L6 283 aa17.58■□□□□ 0.4
SPG7-218ENST00000568205 RASSF8Q8NHQ8 419 aa17.58■□□□□ 0.4
SPG7-218ENST00000568205 BBXQ8WY36 941 aaPredicted RBP17.58■□□□□ 0.4
SPG7-218ENST00000568205 PAWRQ96IZ0 340 aaKnown RBP17.58■□□□□ 0.4
SPG7-218ENST00000568205 CDK5RAP3Q96JB5 506 aa17.58■□□□□ 0.4
SPG7-218ENST00000568205 PNMA5Q96PV4 448 aa17.58■□□□□ 0.4
SPG7-218ENST00000568205 SENP6Q9GZR1 1112 aaPredicted RBP17.58■□□□□ 0.4
SPG7-218ENST00000568205 NRBP2Q9NSY0 501 aa17.58■□□□□ 0.4
SPG7-218ENST00000568205 KIAA1024Q9UPX6 916 aa17.58■□□□□ 0.4
SPG7-218ENST00000568205 GRIN2DO15399 1336 aa17.57■□□□□ 0.4
SPG7-218ENST00000568205 A0A0U1RQG5 324 aaPredicted RBP17.57■□□□□ 0.4
SPG7-218ENST00000568205 GOLGA6L4A6NEF3 574 aa17.57■□□□□ 0.4
SPG7-218ENST00000568205 DDX11L8A8MPP1 907 aa17.57■□□□□ 0.4
SPG7-218ENST00000568205 HBP1O60381 514 aa17.57■□□□□ 0.4
SPG7-218ENST00000568205 SMIM10L2AP0DMW4 78 aa17.57■□□□□ 0.4
SPG7-218ENST00000568205 SMIM10L2BP0DMW5 78 aa17.57■□□□□ 0.4
SPG7-218ENST00000568205 CMA1P23946 247 aa17.57■□□□□ 0.4
SPG7-218ENST00000568205 YWHABP31946 246 aaKnown RBP17.57■□□□□ 0.4
SPG7-218ENST00000568205 SOX10P56693 466 aa17.57■□□□□ 0.4
SPG7-218ENST00000568205 PPFIA1Q13136 1202 aa17.57■□□□□ 0.4
SPG7-218ENST00000568205 TRMT1LQ7Z2T5 733 aaKnown RBP17.57■□□□□ 0.4
SPG7-218ENST00000568205 C7orf31Q8N865 590 aa17.57■□□□□ 0.4
SPG7-218ENST00000568205 PPP1R13LQ8WUF5 828 aa17.57■□□□□ 0.4
SPG7-218ENST00000568205 NACC1Q96RE7 527 aa17.57■□□□□ 0.4
SPG7-218ENST00000568205 NT5C3AQ9H0P0 336 aa17.57■□□□□ 0.4
SPG7-218ENST00000568205 C11orf49Q9H6J7 331 aa17.57■□□□□ 0.4
SPG7-218ENST00000568205 DDX19AQ9NUU7 478 aaKnown RBP17.57■□□□□ 0.4
SPG7-218ENST00000568205 FAM13BQ9NYF5 915 aa17.57■□□□□ 0.4
SPG7-218ENST00000568205 CCDC39Q9UFE4 941 aa17.57■□□□□ 0.4
SPG7-218ENST00000568205 SEPT9Q9UHD8 586 aaPredicted RBP17.57■□□□□ 0.4
SPG7-218ENST00000568205 INSRRP14616 1297 aa17.56■□□□□ 0.4
SPG7-218ENST00000568205 PLCG1P19174 1290 aa17.56■□□□□ 0.4
SPG7-218ENST00000568205 ITGA7Q13683 1181 aa17.56■□□□□ 0.4
SPG7-218ENST00000568205 TPRNQ4KMQ1 711 aa17.56■□□□□ 0.4
SPG7-218ENST00000568205 FAM47CQ5HY64 1035 aa17.56■□□□□ 0.4
SPG7-218ENST00000568205 NFRKBQ6P4R8 1299 aa17.56■□□□□ 0.4
SPG7-218ENST00000568205 ANO5Q75V66 913 aa17.56■□□□□ 0.4
SPG7-218ENST00000568205 NECAB2Q7Z6G3 386 aa17.56■□□□□ 0.4
SPG7-218ENST00000568205 UBE2Q1Q7Z7E8 422 aa17.56■□□□□ 0.4
SPG7-218ENST00000568205 KCTD17Q8N5Z5 321 aa17.56■□□□□ 0.4
SPG7-218ENST00000568205 PIGOQ8TEQ8 1089 aa17.56■□□□□ 0.4
SPG7-218ENST00000568205 PLIN2Q99541 437 aa17.56■□□□□ 0.4
SPG7-218ENST00000568205 A0A087WWV3 80 aa17.55■□□□□ 0.4
SPG7-218ENST00000568205 TMEM150BA6NC51 233 aa17.55■□□□□ 0.4
SPG7-218ENST00000568205 ZBTB39O15060 712 aa17.55■□□□□ 0.4
SPG7-218ENST00000568205 XRCC6P12956 609 aaKnown RBP eCLIP17.55■□□□□ 0.4
SPG7-218ENST00000568205 PTPN11Q06124 597 aaPredicted RBP17.55■□□□□ 0.4
SPG7-218ENST00000568205 GRIK4Q16099 956 aa17.55■□□□□ 0.4
SPG7-218ENST00000568205 ZNF484Q5JVG2 852 aa17.55■□□□□ 0.4
SPG7-218ENST00000568205 OTUD6AQ7L8S5 288 aa17.55■□□□□ 0.4
SPG7-218ENST00000568205 KCNK18Q7Z418 384 aa17.55■□□□□ 0.4
SPG7-218ENST00000568205 SESTD1Q86VW0 696 aa17.55■□□□□ 0.4
SPG7-218ENST00000568205 FSIP1Q8NA03 581 aa17.55■□□□□ 0.4
SPG7-218ENST00000568205 SLC43A3Q8NBI5 491 aa17.55■□□□□ 0.4
SPG7-218ENST00000568205 MRPS27Q92552 414 aaKnown RBP17.55■□□□□ 0.4
SPG7-218ENST00000568205 NIFKQ9BYG3 293 aaKnown RBP17.55■□□□□ 0.4
SPG7-218ENST00000568205 SEZ6LQ9BYH1 1024 aa17.55■□□□□ 0.4
SPG7-218ENST00000568205 ANKEF1Q9NU02 776 aa17.55■□□□□ 0.4
SPG7-218ENST00000568205 HDAC6Q9UBN7 1215 aa17.55■□□□□ 0.4
SPG7-218ENST00000568205 DBR1Q9UK59 544 aaKnown RBP17.55■□□□□ 0.4
SPG7-218ENST00000568205 DNM3Q9UQ16 869 aa17.55■□□□□ 0.4
SPG7-218ENST00000568205 COL1A2P08123 1366 aa17.54■□□□□ 0.4
SPG7-218ENST00000568205 NRCAMQ92823 1304 aa17.54■□□□□ 0.4
SPG7-218ENST00000568205 A0A087X0B3 334 aa17.54■□□□□ 0.4
SPG7-218ENST00000568205 FAM237AA0A1B0GTK4 181 aa17.54■□□□□ 0.4
SPG7-218ENST00000568205 A0A1B0GVL5 298 aa17.54■□□□□ 0.4
SPG7-218ENST00000568205 RRN3P2A6NIE6 340 aa17.54■□□□□ 0.4
SPG7-218ENST00000568205 ZBTB42B2RXF5 422 aa17.54■□□□□ 0.4
SPG7-218ENST00000568205 E9PMD0 336 aa17.54■□□□□ 0.4
SPG7-218ENST00000568205 ARVCFO00192 962 aa17.54■□□□□ 0.4
SPG7-218ENST00000568205 PRPF40AO75400 957 aaKnown RBP17.54■□□□□ 0.4
SPG7-218ENST00000568205 PFKFB1P16118 471 aa17.54■□□□□ 0.4
SPG7-218ENST00000568205 HOXC8P31273 242 aa17.54■□□□□ 0.4
SPG7-218ENST00000568205 ATN1P54259 1190 aaPredicted RBP17.54■□□□□ 0.4
SPG7-218ENST00000568205 TARBP2Q15633 366 aaKnown RBP17.54■□□□□ 0.4
SPG7-218ENST00000568205 XKR9Q5GH70 373 aa17.54■□□□□ 0.4
SPG7-218ENST00000568205 RRAGBQ5VZM2 374 aa17.54■□□□□ 0.4
SPG7-218ENST00000568205 PLA2G4FQ68DD2 849 aa17.54■□□□□ 0.4
SPG7-218ENST00000568205 CCDC73Q6ZRK6 1079 aa17.54■□□□□ 0.4
SPG7-218ENST00000568205 PDILTQ8N807 584 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms