RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 MAP3K14Q99558 947 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 ALG1Q9BT22 464 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 WDR18Q9BV38 432 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 SLC26A6Q9BXS9 759 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 CEP41Q9BYV8 373 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 SCAND2PQ9GZW5 306 aaPredicted RBP7.09□□□□□ -1.27
CAPN3-218ENST00000568153 TAOK3Q9H2K8 898 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 SPON1Q9HCB6 807 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 CYP4F12Q9HCS2 524 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 IL17RBQ9NRM6 502 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 KRT82Q9NSB4 513 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 CACNA2D2Q9NY47 1150 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 PI4KBQ9UBF8 816 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 CFAP45Q9UL16 551 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 PRPF3O43395 683 aaKnown RBP7.08□□□□□ -1.28
CAPN3-218ENST00000568153 NMT2O60551 498 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 AOC2O75106 756 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 ENTPD3O75355 529 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 DRD2P14416 443 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 XBP1P17861 261 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 KIF5BP33176 963 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 PREPP48147 710 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 KRT85P78386 507 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 CXCL9Q07325 125 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 TCP10Q12799 353 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 TROAPQ12815 778 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 RESTQ13127 1097 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 KLHL40Q2TBA0 621 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 UVSSAQ2YD98 709 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 HP1BP3Q5SSJ5 553 aaPredicted RBP7.08□□□□□ -1.28
CAPN3-218ENST00000568153 CIAPIN1Q6FI81 312 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 LLGL2Q6P1M3 1020 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 CDC37L1Q7L3B6 337 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 CTCFLQ8NI51 663 aaPredicted RBP7.08□□□□□ -1.28
CAPN3-218ENST00000568153 GPBAR1Q8TDU6 330 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 PHKBQ93100 1093 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 CCDC17Q96LX7 622 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 LZTS2Q9BRK4 669 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 OSBPL5Q9H0X9 879 aaPredicted RBP7.08□□□□□ -1.28
CAPN3-218ENST00000568153 TDRD3Q9H7E2 651 aaKnown RBP7.08□□□□□ -1.28
CAPN3-218ENST00000568153 DDX4Q9NQI0 724 aaKnown RBP7.08□□□□□ -1.28
CAPN3-218ENST00000568153 TMOD2Q9NZR1 351 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 SERPINB13Q9UIV8 391 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 CYP8B1Q9UNU6 501 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 CNPY2Q9Y2B0 182 aa7.08□□□□□ -1.28
CAPN3-218ENST00000568153 GOLGA6L4A6NEF3 574 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 DEXIO95424 95 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 MBD3O95983 291 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 TOP1P11387 765 aaKnown RBP7.07□□□□□ -1.28
CAPN3-218ENST00000568153 ADH5P11766 374 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 EIF6P56537 245 aaKnown RBP7.07□□□□□ -1.28
CAPN3-218ENST00000568153 UBE2HP62256 183 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 RPS26P62854 115 aaKnown RBP7.07□□□□□ -1.28
CAPN3-218ENST00000568153 GUCY1B3Q02153 619 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 GABPAQ06546 454 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 NFIAQ12857 509 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 GNL2Q13823 731 aaKnown RBP7.07□□□□□ -1.28
CAPN3-218ENST00000568153 LRRC14Q15048 493 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 SAFBQ15424 915 aaKnown RBP eCLIP7.07□□□□□ -1.28
CAPN3-218ENST00000568153 KIF4BQ2VIQ3 1234 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 KRT40Q6A162 431 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 OTUD7BQ6GQQ9 843 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 RCSD1Q6JBY9 416 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 AGMOQ6ZNB7 445 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 BRAPQ7Z569 592 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 NBPF11Q86T75 865 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 ZFPM1Q8IX07 1006 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 C12orf50Q8NA57 414 aaPredicted RBP7.07□□□□□ -1.28
CAPN3-218ENST00000568153 SLC44A5Q8NCS7 719 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 CHAMP1Q96JM3 812 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 TMEM47Q9BQJ4 181 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 RNF26Q9BY78 433 aaPredicted RBP7.07□□□□□ -1.28
CAPN3-218ENST00000568153 RAD18Q9NS91 495 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 ZNF70Q9UC06 446 aaPredicted RBP7.07□□□□□ -1.28
CAPN3-218ENST00000568153 TLR6Q9Y2C9 796 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 PCDHGC5Q9Y5F6 944 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 PCDHAC2Q9Y5I4 1007 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 ROBO3Q96MS0 1386 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 CACNA1SQ13698 1873 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 ANKRD31Q8N7Z5 1873 aa7.07□□□□□ -1.28
CAPN3-218ENST00000568153 STK36Q9NRP7 1315 aa7.06□□□□□ -1.28
CAPN3-218ENST00000568153 DDTLA6NHG4 134 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-218ENST00000568153 MYO1BO43795 1136 aa7.06□□□□□ -1.28
CAPN3-218ENST00000568153 RPS12P25398 132 aaKnown RBP7.06□□□□□ -1.28
CAPN3-218ENST00000568153 NOVP48745 357 aa7.06□□□□□ -1.28
CAPN3-218ENST00000568153 PTPN11Q06124 597 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-218ENST00000568153 SOX4Q06945 474 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-218ENST00000568153 CERKLQ49MI3 558 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-218ENST00000568153 FAM173BQ6P4H8 233 aa7.06□□□□□ -1.28
CAPN3-218ENST00000568153 ARHGAP27Q6ZUM4 889 aa7.06□□□□□ -1.28
CAPN3-218ENST00000568153 ERMP1Q7Z2K6 904 aa7.06□□□□□ -1.28
CAPN3-218ENST00000568153 METTL16Q86W50 562 aaKnown RBP7.06□□□□□ -1.28
CAPN3-218ENST00000568153 LEO1Q8WVC0 666 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-218ENST00000568153 FAM151AQ8WW52 585 aa7.06□□□□□ -1.28
CAPN3-218ENST00000568153 DPF2Q92785 391 aa7.06□□□□□ -1.28
CAPN3-218ENST00000568153 GAL3ST3Q96A11 431 aa7.06□□□□□ -1.28
CAPN3-218ENST00000568153 SPATA32Q96LK8 384 aa7.06□□□□□ -1.28
CAPN3-218ENST00000568153 MYRFLQ96LU7 910 aa7.06□□□□□ -1.28
CAPN3-218ENST00000568153 MTMR4Q9NYA4 1195 aa7.06□□□□□ -1.28
CAPN3-218ENST00000568153 CLIP2Q9UDT6 1046 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms