RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 C16orf92Q96LL3 132 aa5.58□□□□□ -1.52
HERPUD1-212ENST00000567944 DLL4Q9NR61 685 aa5.58□□□□□ -1.52
HERPUD1-212ENST00000567944 SPTLC3Q9NUV7 552 aa5.58□□□□□ -1.52
HERPUD1-212ENST00000567944 PRKAB1Q9Y478 270 aa5.58□□□□□ -1.52
HERPUD1-212ENST00000567944 FOXP2O15409 715 aa5.57□□□□□ -1.52
HERPUD1-212ENST00000567944 EYA4O95677 639 aa5.57□□□□□ -1.52
HERPUD1-212ENST00000567944 ZNF28P17035 718 aa5.57□□□□□ -1.52
HERPUD1-212ENST00000567944 RPL13P26373 211 aaKnown RBP5.57□□□□□ -1.52
HERPUD1-212ENST00000567944 CIAPIN1Q6FI81 312 aa5.57□□□□□ -1.52
HERPUD1-212ENST00000567944 LINC01356Q8N9X3 169 aa5.57□□□□□ -1.52
HERPUD1-212ENST00000567944 ZCCHC14Q8WYQ9 949 aaKnown RBP5.57□□□□□ -1.52
HERPUD1-212ENST00000567944 TOX2Q96NM4 488 aa5.57□□□□□ -1.52
HERPUD1-212ENST00000567944 GBP4Q96PP9 640 aa5.57□□□□□ -1.52
HERPUD1-212ENST00000567944 KCND1Q9NSA2 647 aa5.57□□□□□ -1.52
HERPUD1-212ENST00000567944 IFT57Q9NWB7 429 aa5.57□□□□□ -1.52
HERPUD1-212ENST00000567944 THG1LQ9NWX6 298 aaKnown RBP5.57□□□□□ -1.52
HERPUD1-212ENST00000567944 SPO11Q9Y5K1 396 aa5.57□□□□□ -1.52
HERPUD1-212ENST00000567944 GOLGA6L22H0YM25 854 aa5.56□□□□□ -1.52
HERPUD1-212ENST00000567944 H7C1D1 291 aa5.56□□□□□ -1.52
HERPUD1-212ENST00000567944 NEMP1O14524 444 aa5.56□□□□□ -1.52
HERPUD1-212ENST00000567944 HIP1RO75146 1068 aa5.56□□□□□ -1.52
HERPUD1-212ENST00000567944 KNG1P01042 644 aa5.56□□□□□ -1.52
HERPUD1-212ENST00000567944 PTGS1P23219 599 aa5.56□□□□□ -1.52
HERPUD1-212ENST00000567944 ID4P47928 161 aa5.56□□□□□ -1.52
HERPUD1-212ENST00000567944 GLRBP48167 497 aa5.56□□□□□ -1.52
HERPUD1-212ENST00000567944 SCNN1BP51168 640 aa5.56□□□□□ -1.52
HERPUD1-212ENST00000567944 SMAD3P84022 425 aaKnown RBP5.56□□□□□ -1.52
HERPUD1-212ENST00000567944 SMAD2Q15796 467 aaKnown RBP5.56□□□□□ -1.52
HERPUD1-212ENST00000567944 TAF7LQ5H9L4 462 aa5.56□□□□□ -1.52
HERPUD1-212ENST00000567944 LRSAM1Q6UWE0 723 aa5.56□□□□□ -1.52
HERPUD1-212ENST00000567944 STPG3Q8N7X2 389 aa5.56□□□□□ -1.52
HERPUD1-212ENST00000567944 CHAC2Q8WUX2 184 aa5.56□□□□□ -1.52
HERPUD1-212ENST00000567944 ZMAT4Q9H898 229 aa5.56□□□□□ -1.52
HERPUD1-212ENST00000567944 UCKL1Q9NWZ5 548 aa5.56□□□□□ -1.52
HERPUD1-212ENST00000567944 ZFP69BQ9UJL9 534 aa5.56□□□□□ -1.52
HERPUD1-212ENST00000567944 ZKSCAN5Q9Y2L8 839 aa5.56□□□□□ -1.52
HERPUD1-212ENST00000567944 PRAMEF22A3QJZ6 481 aa5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 TRIM13O60858 407 aa5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 GAS7O60861 476 aa5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 FKBP9O95302 570 aa5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 LSSP48449 732 aa5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 FNTBP49356 437 aa5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 TCERG1LQ5VWI1 586 aa5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 PRAMEF18Q5VWM3 479 aa5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 LHFPL2Q6ZUX7 228 aa5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 FKBP9P1Q75LS8 142 aa5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 DDX46Q7L014 1031 aaKnown RBP5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 TMEM151BQ8IW70 566 aa5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 CARFQ8N187 725 aa5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 EFHBQ8N7U6 833 aa5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 OR2W6PQ8NHA6 318 aa5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 CLIC6Q96NY7 704 aa5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 GPR101Q96P66 508 aaPredicted RBP5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 TACO1Q9BSH4 297 aaKnown RBP5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 MS4A5Q9H3V2 200 aa5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 SPC25Q9HBM1 224 aa5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 INCENPQ9NQS7 918 aa5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 ACSS2Q9NR19 701 aa5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 GALNT8Q9NY28 637 aa5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 ARHGAP20Q9P2F6 1191 aa5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 ARHGAP28Q9P2N2 729 aa5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 ASB1Q9Y576 335 aa5.55□□□□□ -1.52
HERPUD1-212ENST00000567944 DDX3XO00571 662 aaKnown RBP eCLIP5.54□□□□□ -1.52
HERPUD1-212ENST00000567944 DNAJC6O75061 913 aa5.54□□□□□ -1.52
HERPUD1-212ENST00000567944 CYP17A1P05093 508 aa5.54□□□□□ -1.52
HERPUD1-212ENST00000567944 IL13P35225 146 aa5.54□□□□□ -1.52
HERPUD1-212ENST00000567944 SOX5P35711 763 aa5.54□□□□□ -1.52
HERPUD1-212ENST00000567944 SLURP1P55000 103 aa5.54□□□□□ -1.52
HERPUD1-212ENST00000567944 IL13RA1P78552 427 aa5.54□□□□□ -1.52
HERPUD1-212ENST00000567944 AMPD3Q01432 767 aa5.54□□□□□ -1.52
HERPUD1-212ENST00000567944 STRN3Q13033 797 aa5.54□□□□□ -1.52
HERPUD1-212ENST00000567944 STILQ15468 1287 aa5.54□□□□□ -1.52
HERPUD1-212ENST00000567944 FILIP1Q7Z7B0 1213 aa5.54□□□□□ -1.52
HERPUD1-212ENST00000567944 SPATA25Q9BR10 227 aa5.54□□□□□ -1.52
HERPUD1-212ENST00000567944 EMC7Q9NPA0 242 aa5.54□□□□□ -1.52
HERPUD1-212ENST00000567944 CROTQ9UKG9 612 aa5.54□□□□□ -1.52
HERPUD1-212ENST00000567944 LCHNA4D1U4 455 aa5.53□□□□□ -1.52
HERPUD1-212ENST00000567944 KLHL18O94889 574 aa5.53□□□□□ -1.52
HERPUD1-212ENST00000567944 ZSCAN22P10073 491 aaPredicted RBP5.53□□□□□ -1.52
HERPUD1-212ENST00000567944 ECE1P42892 770 aa5.53□□□□□ -1.52
HERPUD1-212ENST00000567944 SARSP49591 514 aaKnown RBP5.53□□□□□ -1.52
HERPUD1-212ENST00000567944 KPNA1P52294 538 aaPredicted RBP5.53□□□□□ -1.52
HERPUD1-212ENST00000567944 EPHA7Q15375 998 aa5.53□□□□□ -1.52
HERPUD1-212ENST00000567944 ZNF174Q15697 407 aa5.53□□□□□ -1.52
HERPUD1-212ENST00000567944 KANK2Q63ZY3 851 aa5.53□□□□□ -1.52
HERPUD1-212ENST00000567944 KRTAP5-3Q6L8H2 238 aa5.53□□□□□ -1.52
HERPUD1-212ENST00000567944 LILRA6Q6PI73 481 aa5.53□□□□□ -1.52
HERPUD1-212ENST00000567944 ZNF761Q86XN6 746 aaPredicted RBP5.53□□□□□ -1.52
HERPUD1-212ENST00000567944 NUDT10Q8NFP7 164 aa5.53□□□□□ -1.52
HERPUD1-212ENST00000567944 NUDT11Q96G61 164 aa5.53□□□□□ -1.52
HERPUD1-212ENST00000567944 YTHDC1Q96MU7 727 aaKnown RBP5.53□□□□□ -1.52
HERPUD1-212ENST00000567944 TMX1Q9H3N1 280 aa5.53□□□□□ -1.52
HERPUD1-212ENST00000567944 SEMA4AQ9H3S1 761 aa5.53□□□□□ -1.52
HERPUD1-212ENST00000567944 PCIF1Q9H4Z3 704 aa5.53□□□□□ -1.52
HERPUD1-212ENST00000567944 TOMM22Q9NS69 142 aa5.53□□□□□ -1.52
HERPUD1-212ENST00000567944 NTMQ9P121 344 aa5.53□□□□□ -1.52
HERPUD1-212ENST00000567944 SHROOM4Q9ULL8 1493 aa5.52□□□□□ -1.53
HERPUD1-212ENST00000567944 NCANO14594 1321 aa5.52□□□□□ -1.53
HERPUD1-212ENST00000567944 PRRG2O14669 202 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms