RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 TET1Q8NFU7 2136 aa14.3□□□□□ -0.12
GINS3-209ENST00000567909 RRN3P2A6NIE6 340 aa14.3□□□□□ -0.12
GINS3-209ENST00000567909 PITPNM1O00562 1244 aa14.3□□□□□ -0.12
GINS3-209ENST00000567909 ZNF862O60290 1169 aa14.3□□□□□ -0.12
GINS3-209ENST00000567909 CKBP12277 381 aa14.3□□□□□ -0.12
GINS3-209ENST00000567909 THPOP40225 353 aa14.3□□□□□ -0.12
GINS3-209ENST00000567909 ADAM17P78536 824 aa14.3□□□□□ -0.12
GINS3-209ENST00000567909 SPIRE1Q08AE8 756 aa14.3□□□□□ -0.12
GINS3-209ENST00000567909 PPIGQ13427 754 aaKnown RBP eCLIP14.3□□□□□ -0.12
GINS3-209ENST00000567909 RILPL1Q5EBL4 403 aa14.3□□□□□ -0.12
GINS3-209ENST00000567909 RUFY4Q6ZNE9 571 aa14.3□□□□□ -0.12
GINS3-209ENST00000567909 BBXQ8WY36 941 aaPredicted RBP14.3□□□□□ -0.12
GINS3-209ENST00000567909 FAM167AQ96KS9 214 aa14.3□□□□□ -0.12
GINS3-209ENST00000567909 MYH15Q9Y2K3 1946 aa14.3□□□□□ -0.12
GINS3-209ENST00000567909 RANBP2P49792 3224 aaKnown RBP14.29□□□□□ -0.12
GINS3-209ENST00000567909 POTEMA6NI47 508 aa14.29□□□□□ -0.12
GINS3-209ENST00000567909 STX6O43752 255 aa14.29□□□□□ -0.12
GINS3-209ENST00000567909 OATP04181 439 aa14.29□□□□□ -0.12
GINS3-209ENST00000567909 CTSHP09668 335 aa14.29□□□□□ -0.12
GINS3-209ENST00000567909 IQCF3P0C7M6 154 aa14.29□□□□□ -0.12
GINS3-209ENST00000567909 ACRP10323 421 aa14.29□□□□□ -0.12
GINS3-209ENST00000567909 BMP8BP34820 402 aa14.29□□□□□ -0.12
GINS3-209ENST00000567909 TECP42680 631 aa14.29□□□□□ -0.12
GINS3-209ENST00000567909 EPHB4P54760 987 aa14.29□□□□□ -0.12
GINS3-209ENST00000567909 CYP4A11Q02928 519 aa14.29□□□□□ -0.12
GINS3-209ENST00000567909 PTGDRQ13258 359 aa14.29□□□□□ -0.12
GINS3-209ENST00000567909 EPHA7Q15375 998 aa14.29□□□□□ -0.12
GINS3-209ENST00000567909 TRIM71Q2Q1W2 868 aaKnown RBP14.29□□□□□ -0.12
GINS3-209ENST00000567909 ZNF484Q5JVG2 852 aa14.29□□□□□ -0.12
GINS3-209ENST00000567909 MARCH8Q5T0T0 291 aa14.29□□□□□ -0.12
GINS3-209ENST00000567909 ZNF618Q5T7W0 954 aa14.29□□□□□ -0.12
GINS3-209ENST00000567909 LRRC8DQ7L1W4 858 aa14.29□□□□□ -0.12
GINS3-209ENST00000567909 BRAPQ7Z569 592 aa14.29□□□□□ -0.12
GINS3-209ENST00000567909 DEFB128Q7Z7B8 93 aa14.29□□□□□ -0.12
GINS3-209ENST00000567909 DYDC2Q96IM9 177 aa14.29□□□□□ -0.12
GINS3-209ENST00000567909 FAM49AQ9H0Q0 323 aaPredicted RBP14.29□□□□□ -0.12
GINS3-209ENST00000567909 NRBP2Q9NSY0 501 aa14.29□□□□□ -0.12
GINS3-209ENST00000567909 RGL1Q9NZL6 768 aa14.29□□□□□ -0.12
GINS3-209ENST00000567909 SEPT9Q9UHD8 586 aaPredicted RBP14.29□□□□□ -0.12
GINS3-209ENST00000567909 MBLAC1A4D2B0 266 aaPredicted RBP14.28□□□□□ -0.12
GINS3-209ENST00000567909 TMEM150BA6NC51 233 aa14.28□□□□□ -0.12
GINS3-209ENST00000567909 DDX11L8A8MPP1 907 aa14.28□□□□□ -0.12
GINS3-209ENST00000567909 P4HBP07237 508 aaKnown RBP14.28□□□□□ -0.12
GINS3-209ENST00000567909 COL1A2P08123 1366 aa14.28□□□□□ -0.12
GINS3-209ENST00000567909 SELPP16109 830 aa14.28□□□□□ -0.12
GINS3-209ENST00000567909 KLRC1P26715 233 aa14.28□□□□□ -0.12
GINS3-209ENST00000567909 QARSP47897 775 aaKnown RBP14.28□□□□□ -0.12
GINS3-209ENST00000567909 PSMC5P62195 406 aa14.28□□□□□ -0.12
GINS3-209ENST00000567909 CTTNQ14247 550 aaKnown RBP14.28□□□□□ -0.12
GINS3-209ENST00000567909 FOXD4L5Q5VV16 416 aaPredicted RBP14.28□□□□□ -0.12
GINS3-209ENST00000567909 ARID2Q68CP9 1835 aa14.28□□□□□ -0.12
GINS3-209ENST00000567909 MTHFD1LQ6UB35 978 aa14.28□□□□□ -0.12
GINS3-209ENST00000567909 C4orf32Q8N8J7 132 aa14.28□□□□□ -0.12
GINS3-209ENST00000567909 DNAJB3Q8WWF6 145 aa14.28□□□□□ -0.12
GINS3-209ENST00000567909 FOXD4L4Q8WXT5 416 aaPredicted RBP14.28□□□□□ -0.12
GINS3-209ENST00000567909 EIF2AK1Q9BQI3 630 aaKnown RBP14.28□□□□□ -0.12
GINS3-209ENST00000567909 LXNQ9BS40 222 aa14.28□□□□□ -0.12
GINS3-209ENST00000567909 PRO3102Q9H379 93 aa14.28□□□□□ -0.12
GINS3-209ENST00000567909 IL23AQ9NPF7 189 aa14.28□□□□□ -0.12
GINS3-209ENST00000567909 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.28□□□□□ -0.12
GINS3-209ENST00000567909 MTMR6Q9Y217 621 aa14.28□□□□□ -0.12
GINS3-209ENST00000567909 SIP14410 1827 aa14.27□□□□□ -0.12
GINS3-209ENST00000567909 ZBTB42B2RXF5 422 aa14.27□□□□□ -0.13
GINS3-209ENST00000567909 RBAK-RBAKDNI3L0D1 243 aa14.27□□□□□ -0.13
GINS3-209ENST00000567909 DKC1O60832 514 aaKnown RBP eCLIP14.27□□□□□ -0.13
GINS3-209ENST00000567909 RBL2Q08999 1139 aa14.27□□□□□ -0.13
GINS3-209ENST00000567909 RESTQ13127 1097 aa14.27□□□□□ -0.13
GINS3-209ENST00000567909 BECN1Q14457 450 aa14.27□□□□□ -0.13
GINS3-209ENST00000567909 TMEM266Q2M3C6 531 aa14.27□□□□□ -0.13
GINS3-209ENST00000567909 MTERF2Q49AM1 385 aa14.27□□□□□ -0.13
GINS3-209ENST00000567909 XKR3Q5GH77 459 aa14.27□□□□□ -0.13
GINS3-209ENST00000567909 C9orf50Q5SZB4 431 aa14.27□□□□□ -0.13
GINS3-209ENST00000567909 TAF2Q6P1X5 1199 aa14.27□□□□□ -0.13
GINS3-209ENST00000567909 TPH2Q8IWU9 490 aa14.27□□□□□ -0.13
GINS3-209ENST00000567909 RPUSD2Q8IZ73 545 aaKnown RBP14.27□□□□□ -0.13
GINS3-209ENST00000567909 TDHQ8IZJ6 230 aa14.27□□□□□ -0.13
GINS3-209ENST00000567909 SH2D3AQ9BRG2 576 aa14.27□□□□□ -0.13
GINS3-209ENST00000567909 FTOQ9C0B1 505 aaKnown RBP eCLIP14.27□□□□□ -0.13
GINS3-209ENST00000567909 WRAP73Q9P2S5 460 aaPredicted RBP14.27□□□□□ -0.13
GINS3-209ENST00000567909 CEP131Q9UPN4 1083 aa14.27□□□□□ -0.13
GINS3-209ENST00000567909 LAMA2P24043 3122 aaKnown RBP14.26□□□□□ -0.13
GINS3-209ENST00000567909 RSPH10B2B2RC85 870 aa14.26□□□□□ -0.13
GINS3-209ENST00000567909 RSPH10BP0C881 870 aa14.26□□□□□ -0.13
GINS3-209ENST00000567909 RFC2P35250 354 aa14.26□□□□□ -0.13
GINS3-209ENST00000567909 SHHQ15465 462 aa14.26□□□□□ -0.13
GINS3-209ENST00000567909 PLA2G4FQ68DD2 849 aa14.26□□□□□ -0.13
GINS3-209ENST00000567909 FAM173BQ6P4H8 233 aa14.26□□□□□ -0.13
GINS3-209ENST00000567909 RSPH3Q86UC2 560 aa14.26□□□□□ -0.13
GINS3-209ENST00000567909 METTL13Q8N6R0 699 aa14.26□□□□□ -0.13
GINS3-209ENST00000567909 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.26□□□□□ -0.13
GINS3-209ENST00000567909 ZSWIM4Q9H7M6 989 aa14.26□□□□□ -0.13
GINS3-209ENST00000567909 PCDHA2Q9Y5H9 948 aa14.26□□□□□ -0.13
GINS3-209ENST00000567909 LAD1O00515 517 aa14.25□□□□□ -0.13
GINS3-209ENST00000567909 CAND2O75155 1236 aa14.25□□□□□ -0.13
GINS3-209ENST00000567909 SLITRK3O94933 977 aa14.25□□□□□ -0.13
GINS3-209ENST00000567909 STBD1O95210 358 aa14.25□□□□□ -0.13
GINS3-209ENST00000567909 C22orf31O95567 290 aa14.25□□□□□ -0.13
GINS3-209ENST00000567909 TBC1D8BQ0IIM8 1120 aa14.25□□□□□ -0.13
GINS3-209ENST00000567909 TMEM62Q0P6H9 643 aa14.25□□□□□ -0.13
GINS3-209ENST00000567909 TMEM240Q5SV17 173 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms