RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 XPO6Q96QU8 1125 aaKnown RBP13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 GUCY1A2P33402 732 aa13.35□□□□□ -0.27
CSPG4P13-202ENST00000567704 RUBCNQ92622 972 aa13.35□□□□□ -0.27
CSPG4P13-202ENST00000567704 SLITRK6Q9H5Y7 841 aa13.35□□□□□ -0.27
CSPG4P13-202ENST00000567704 ATG3Q9NT62 314 aa13.35□□□□□ -0.27
CSPG4P13-202ENST00000567704 SCINQ9Y6U3 715 aa13.35□□□□□ -0.27
CSPG4P13-202ENST00000567704 MROH7-TTC4A0A0A0MT08 1334 aa13.35□□□□□ -0.27
CSPG4P13-202ENST00000567704 ATP7BP35670 1465 aa13.35□□□□□ -0.27
CSPG4P13-202ENST00000567704 NCF2P19878 526 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P13-202ENST00000567704 SPATA21Q7Z572 469 aa13.35□□□□□ -0.27
CSPG4P13-202ENST00000567704 MRPL46Q9H2W6 279 aaKnown RBP13.35□□□□□ -0.27
CSPG4P13-202ENST00000567704 NOD2Q9HC29 1040 aa13.35□□□□□ -0.27
CSPG4P13-202ENST00000567704 RTCBQ9Y3I0 505 aaKnown RBP13.35□□□□□ -0.27
CSPG4P13-202ENST00000567704 LMTK3Q96Q04 1460 aa13.35□□□□□ -0.27
CSPG4P13-202ENST00000567704 CFAP69A5D8W1 941 aa13.35□□□□□ -0.27
CSPG4P13-202ENST00000567704 GPC4O75487 556 aa13.35□□□□□ -0.27
CSPG4P13-202ENST00000567704 C1orf146Q5VVC0 180 aa13.35□□□□□ -0.27
CSPG4P13-202ENST00000567704 RBM43Q6ZSC3 357 aaKnown RBP13.35□□□□□ -0.27
CSPG4P13-202ENST00000567704 PYROXD1Q8WU10 500 aa13.35□□□□□ -0.27
CSPG4P13-202ENST00000567704 FAM161BQ96MY7 647 aa13.35□□□□□ -0.27
CSPG4P13-202ENST00000567704 SMYD3Q9H7B4 428 aa13.35□□□□□ -0.27
CSPG4P13-202ENST00000567704 FGFR1OP2Q9NVK5 253 aa13.35□□□□□ -0.27
CSPG4P13-202ENST00000567704 DIS3Q9Y2L1 958 aaKnown RBP13.35□□□□□ -0.27
CSPG4P13-202ENST00000567704 SYNGAP1Q96PV0 1343 aa13.35□□□□□ -0.27
CSPG4P13-202ENST00000567704 MRPS9P82933 396 aaKnown RBP13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 KLC1Q07866 573 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 KCNH2Q12809 1159 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 ARL8AQ96BM9 186 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 LRGUKQ96M69 825 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 ARHGEF10LQ9HCE6 1279 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 ZNF446Q9NWS9 450 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 ARL2BPQ9Y2Y0 163 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 ITIH6Q6UXX5 1313 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 CCT8L1PA6NM43 557 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 AOC3Q16853 763 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 WDR93Q6P2C0 686 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 USP17L2Q6R6M4 530 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 GINM1Q9NU53 330 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 CDHR2Q9BYE9 1310 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 MIF4GDA9UHW6 222 aaKnown RBP13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 APOEP02649 317 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 RBM26Q5T8P6 1007 aaKnown RBP13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 TRPM8Q7Z2W7 1104 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 TRAIPQ9BWF2 469 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 EPS15L1Q9UBC2 864 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 DNAJC12Q9UKB3 198 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 KRT1P04264 644 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 FDPSP14324 419 aaKnown RBP13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 SCP2P22307 547 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 FGFR4P22455 802 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 XKR9Q5GH70 373 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 ANKRD40Q6AI12 368 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 CENPUQ71F23 418 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 RSRC2Q7L4I2 434 aaKnown RBP13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 DDX42Q86XP3 938 aaKnown RBP eCLIP13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 MYCBPAPQ8TBZ2 947 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 DTX3LQ8TDB6 740 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 CDKL2Q92772 493 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 GGA1Q9UJY5 639 aa13.34□□□□□ -0.27
CSPG4P13-202ENST00000567704 TTI1O43156 1089 aa13.33□□□□□ -0.27
CSPG4P13-202ENST00000567704 DKC1O60832 514 aaKnown RBP eCLIP13.33□□□□□ -0.27
CSPG4P13-202ENST00000567704 CTDNEP1O95476 244 aa13.33□□□□□ -0.27
CSPG4P13-202ENST00000567704 FCER1AP12319 257 aa13.33□□□□□ -0.27
CSPG4P13-202ENST00000567704 MARCH10Q8NA82 808 aaPredicted RBP13.33□□□□□ -0.27
CSPG4P13-202ENST00000567704 HEMGNQ9BXL5 484 aa13.33□□□□□ -0.27
CSPG4P13-202ENST00000567704 CCDC87Q9NVE4 849 aa13.33□□□□□ -0.27
CSPG4P13-202ENST00000567704 USP15Q9Y4E8 981 aaPredicted RBP13.33□□□□□ -0.27
CSPG4P13-202ENST00000567704 WDR19Q8NEZ3 1342 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 RNF17Q9BXT8 1623 aaKnown RBP13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 HNRNPCP07910 306 aaKnown RBP eCLIP13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 CCND1P24385 295 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 EPHB1P54762 984 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 BPIFB4P59827 614 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 TMPRSS15P98073 1019 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 RASGRF1Q13972 1273 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 CRYMQ14894 314 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 PDXDC1Q6P996 788 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 RNF207Q6ZRF8 634 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 RFX6Q8HWS3 928 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 RNF34Q969K3 372 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 VTI1AQ96AJ9 217 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 NGLY1Q96IV0 654 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 MPHOSPH6Q99547 160 aaKnown RBP13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 KANSL2Q9H9L4 492 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 ERVV-2B6SEH9 535 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 TXNRD1Q16881 649 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 POMGNT1Q8WZA1 660 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 SH2D4AQ9H788 454 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 EHD2Q9NZN4 543 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 ZNF711Q9Y462 761 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 ATP10DQ9P241 1426 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 CAMSAP1Q5T5Y3 1602 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 FAM205CA6NFA0 338 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 POTEMA6NI47 508 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 LIG4P49917 911 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 CUL3Q13618 768 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 HP1BP3Q5SSJ5 553 aaPredicted RBP13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 NAIF1Q69YI7 327 aaPredicted RBP13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 TMEM154Q6P9G4 183 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms