RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 ADCK5Q3MIX3 580 aa21.15■□□□□ 0.98
LINC01238-205ENST00000567549 MARCH8Q5T0T0 291 aa21.15■□□□□ 0.98
LINC01238-205ENST00000567549 PLA2G4DQ86XP0 818 aa21.15■□□□□ 0.98
LINC01238-205ENST00000567549 RASEFQ8IZ41 740 aa21.15■□□□□ 0.98
LINC01238-205ENST00000567549 TELO2Q9Y4R8 837 aa21.15■□□□□ 0.98
LINC01238-205ENST00000567549 ENPP3O14638 875 aa21.14■□□□□ 0.97
LINC01238-205ENST00000567549 CYP3A4P08684 503 aa21.14■□□□□ 0.97
LINC01238-205ENST00000567549 ARP10275 920 aa21.14■□□□□ 0.97
LINC01238-205ENST00000567549 COL9A1P20849 921 aa21.14■□□□□ 0.97
LINC01238-205ENST00000567549 KCNA5P22460 613 aa21.14■□□□□ 0.97
LINC01238-205ENST00000567549 BMPR1AP36894 532 aa21.14■□□□□ 0.97
LINC01238-205ENST00000567549 KRT76Q01546 638 aa21.14■□□□□ 0.97
LINC01238-205ENST00000567549 NAALADL2Q58DX5 795 aa21.14■□□□□ 0.97
LINC01238-205ENST00000567549 ZNF484Q5JVG2 852 aa21.14■□□□□ 0.97
LINC01238-205ENST00000567549 NPAS4Q8IUM7 802 aa21.14■□□□□ 0.97
LINC01238-205ENST00000567549 SMAP1Q8IYB5 467 aaPredicted RBP21.14■□□□□ 0.97
LINC01238-205ENST00000567549 ZNF710Q8N1W2 664 aa21.14■□□□□ 0.97
LINC01238-205ENST00000567549 FBXL16Q8N461 479 aa21.14■□□□□ 0.97
LINC01238-205ENST00000567549 JAKMIP1Q96N16 626 aaKnown RBP21.14■□□□□ 0.97
LINC01238-205ENST00000567549 CELF4Q9BZC1 486 aaKnown RBP21.14■□□□□ 0.97
LINC01238-205ENST00000567549 ZMYND12Q9H0C1 365 aa21.14■□□□□ 0.97
LINC01238-205ENST00000567549 ZNF302Q9NR11 478 aa21.14■□□□□ 0.97
LINC01238-205ENST00000567549 CEP131Q9UPN4 1083 aa21.14■□□□□ 0.97
LINC01238-205ENST00000567549 TTC3P53804 2025 aa21.14■□□□□ 0.97
LINC01238-205ENST00000567549 IGSF9BQ9UPX0 1349 aa21.13■□□□□ 0.97
LINC01238-205ENST00000567549 IPO5O00410 1097 aaKnown RBP21.13■□□□□ 0.97
LINC01238-205ENST00000567549 EPB41L2O43491 1005 aaKnown RBP21.13■□□□□ 0.97
LINC01238-205ENST00000567549 TYW1BQ6NUM6 668 aa21.13■□□□□ 0.97
LINC01238-205ENST00000567549 PDXDC2PQ6P474 469 aa21.13■□□□□ 0.97
LINC01238-205ENST00000567549 Q6ZUG5 572 aa21.13■□□□□ 0.97
LINC01238-205ENST00000567549 CKAP2LQ8IYA6 745 aa21.13■□□□□ 0.97
LINC01238-205ENST00000567549 CMTR2Q8IYT2 770 aaKnown RBP21.13■□□□□ 0.97
LINC01238-205ENST00000567549 ATP8B4Q8TF62 1192 aa21.13■□□□□ 0.97
LINC01238-205ENST00000567549 CLP1Q92989 425 aaKnown RBP21.13■□□□□ 0.97
LINC01238-205ENST00000567549 BRF1Q92994 677 aa21.13■□□□□ 0.97
LINC01238-205ENST00000567549 PABPC5Q96DU9 382 aaKnown RBP21.13■□□□□ 0.97
LINC01238-205ENST00000567549 CCDC136Q96JN2 1154 aa21.13■□□□□ 0.97
LINC01238-205ENST00000567549 PGBD1Q96JS3 809 aa21.13■□□□□ 0.97
LINC01238-205ENST00000567549 NECAB3Q96P71 396 aaPredicted RBP21.13■□□□□ 0.97
LINC01238-205ENST00000567549 PCYT2Q99447 389 aa21.13■□□□□ 0.97
LINC01238-205ENST00000567549 ZNF577Q9BSK1 485 aa21.13■□□□□ 0.97
LINC01238-205ENST00000567549 C22orf23Q9BZE7 217 aa21.13■□□□□ 0.97
LINC01238-205ENST00000567549 LRFN2Q9ULH4 789 aa21.13■□□□□ 0.97
LINC01238-205ENST00000567549 NID2Q14112 1375 aa21.12■□□□□ 0.97
LINC01238-205ENST00000567549 IGKV6D-21A0A0A0MT36 114 aa21.12■□□□□ 0.97
LINC01238-205ENST00000567549 PRPF3O43395 683 aaKnown RBP21.12■□□□□ 0.97
LINC01238-205ENST00000567549 CDC27P30260 824 aa21.12■□□□□ 0.97
LINC01238-205ENST00000567549 HSPA4P34932 840 aa21.12■□□□□ 0.97
LINC01238-205ENST00000567549 ITGB3BPQ13352 177 aaPredicted RBP21.12■□□□□ 0.97
LINC01238-205ENST00000567549 COL9A3Q14050 684 aaPredicted RBP21.12■□□□□ 0.97
LINC01238-205ENST00000567549 JAKMIP3Q5VZ66 844 aa21.12■□□□□ 0.97
LINC01238-205ENST00000567549 ZNF746Q6NUN9 644 aaPredicted RBP21.12■□□□□ 0.97
LINC01238-205ENST00000567549 MTHFD1LQ6UB35 978 aa21.12■□□□□ 0.97
LINC01238-205ENST00000567549 CYP2W1Q8TAV3 490 aa21.12■□□□□ 0.97
LINC01238-205ENST00000567549 KCNB2Q92953 911 aa21.12■□□□□ 0.97
LINC01238-205ENST00000567549 FAM167AQ96KS9 214 aa21.12■□□□□ 0.97
LINC01238-205ENST00000567549 RNF26Q9BY78 433 aaPredicted RBP21.12■□□□□ 0.97
LINC01238-205ENST00000567549 BRWD1Q9NSI6 2320 aa21.12■□□□□ 0.97
LINC01238-205ENST00000567549 MYH9P35579 1960 aaKnown RBP21.12■□□□□ 0.97
LINC01238-205ENST00000567549 DGKIO75912 1065 aa21.11■□□□□ 0.97
LINC01238-205ENST00000567549 PSAPP07602 524 aa21.11■□□□□ 0.97
LINC01238-205ENST00000567549 CD52P31358 61 aa21.11■□□□□ 0.97
LINC01238-205ENST00000567549 ADD1P35611 737 aaKnown RBP21.11■□□□□ 0.97
LINC01238-205ENST00000567549 APOBRQ0VD83 1088 aa21.11■□□□□ 0.97
LINC01238-205ENST00000567549 ABHD15Q6UXT9 468 aa21.11■□□□□ 0.97
LINC01238-205ENST00000567549 TRIM22Q8IYM9 498 aa21.11■□□□□ 0.97
LINC01238-205ENST00000567549 BBXQ8WY36 941 aaPredicted RBP21.11■□□□□ 0.97
LINC01238-205ENST00000567549 P2RX5Q93086 422 aa21.11■□□□□ 0.97
LINC01238-205ENST00000567549 C1orf112Q9NSG2 853 aa21.11■□□□□ 0.97
LINC01238-205ENST00000567549 TMEM260Q9NX78 707 aa21.11■□□□□ 0.97
LINC01238-205ENST00000567549 PADI3Q9ULW8 664 aa21.11■□□□□ 0.97
LINC01238-205ENST00000567549 BDP1A6H8Y1 2624 aa21.1■□□□□ 0.97
LINC01238-205ENST00000567549 REV3LO60673 3130 aa21.1■□□□□ 0.97
LINC01238-205ENST00000567549 DDX39AO00148 427 aaKnown RBP21.1■□□□□ 0.97
LINC01238-205ENST00000567549 GPR182O15218 404 aa21.1■□□□□ 0.97
LINC01238-205ENST00000567549 KLRC1P26715 233 aa21.1■□□□□ 0.97
LINC01238-205ENST00000567549 PTCRAQ6ISU1 281 aaPredicted RBP21.1■□□□□ 0.97
LINC01238-205ENST00000567549 EP400NLQ6ZTU2 488 aa21.1■□□□□ 0.97
LINC01238-205ENST00000567549 ZNF689Q96CS4 500 aaPredicted RBP21.1■□□□□ 0.97
LINC01238-205ENST00000567549 FAM217BQ9NTX9 383 aaPredicted RBP21.1■□□□□ 0.97
LINC01238-205ENST00000567549 MUC3AQ02505 3323 aa21.09■□□□□ 0.97
LINC01238-205ENST00000567549 FSD2A1L4K1 749 aa21.09■□□□□ 0.97
LINC01238-205ENST00000567549 RPS6KB1P23443 525 aa21.09■□□□□ 0.97
LINC01238-205ENST00000567549 TMOD1P28289 359 aa21.09■□□□□ 0.97
LINC01238-205ENST00000567549 TCEAL5Q5H9L2 206 aa21.09■□□□□ 0.97
LINC01238-205ENST00000567549 CPLX2Q6PUV4 134 aaKnown RBP21.09■□□□□ 0.97
LINC01238-205ENST00000567549 FAM177A1Q8N128 213 aaPredicted RBP21.09■□□□□ 0.97
LINC01238-205ENST00000567549 OSBPL7Q9BZF2 842 aa21.09■□□□□ 0.97
LINC01238-205ENST00000567549 SH3GLB2Q9NR46 395 aa21.09■□□□□ 0.97
LINC01238-205ENST00000567549 AAASQ9NRG9 546 aa21.09■□□□□ 0.97
LINC01238-205ENST00000567549 SAMM50Q9Y512 469 aa21.09■□□□□ 0.97
LINC01238-205ENST00000567549 PCDHA10Q9Y5I2 948 aa21.09■□□□□ 0.97
LINC01238-205ENST00000567549 SNX14Q9Y5W7 946 aa21.09■□□□□ 0.97
LINC01238-205ENST00000567549 DENND3A2RUS2 1198 aa21.08■□□□□ 0.97
LINC01238-205ENST00000567549 FAM86B1E9PN63 330 aa21.08■□□□□ 0.97
LINC01238-205ENST00000567549 MAGEB2O15479 319 aa21.08■□□□□ 0.97
LINC01238-205ENST00000567549 RPS6KA5O75582 802 aa21.08■□□□□ 0.97
LINC01238-205ENST00000567549 FAM86B2P0C5J1 330 aa21.08■□□□□ 0.97
LINC01238-205ENST00000567549 SSTR3P32745 418 aaPredicted RBP21.08■□□□□ 0.97
LINC01238-205ENST00000567549 NFX1Q12986 1120 aaKnown RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms