RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 P2RX5Q93086 422 aa17.76■□□□□ 0.43
PALB2-205ENST00000567003 CDHR1Q96JP9 859 aa17.76■□□□□ 0.43
PALB2-205ENST00000567003 MFSD14AQ96MC6 490 aa17.76■□□□□ 0.43
PALB2-205ENST00000567003 TMX1Q9H3N1 280 aa17.76■□□□□ 0.43
PALB2-205ENST00000567003 JADE2Q9NQC1 790 aa17.76■□□□□ 0.43
PALB2-205ENST00000567003 SGSM2O43147 1006 aa17.75■□□□□ 0.43
PALB2-205ENST00000567003 PRC1O43663 620 aa17.75■□□□□ 0.43
PALB2-205ENST00000567003 SCG2P13521 617 aa17.75■□□□□ 0.43
PALB2-205ENST00000567003 PAK2Q13177 524 aa17.75■□□□□ 0.43
PALB2-205ENST00000567003 PLCB4Q15147 1175 aa17.75■□□□□ 0.43
PALB2-205ENST00000567003 IER5LQ5T953 404 aa17.75■□□□□ 0.43
PALB2-205ENST00000567003 NFXL1Q6ZNB6 911 aa17.75■□□□□ 0.43
PALB2-205ENST00000567003 CCDC82Q8N4S0 544 aa17.75■□□□□ 0.43
PALB2-205ENST00000567003 EFHBQ8N7U6 833 aa17.75■□□□□ 0.43
PALB2-205ENST00000567003 CYP2W1Q8TAV3 490 aa17.75■□□□□ 0.43
PALB2-205ENST00000567003 RUFY2Q8WXA3 655 aa17.75■□□□□ 0.43
PALB2-205ENST00000567003 EDAQ92838 391 aa17.75■□□□□ 0.43
PALB2-205ENST00000567003 PGBD1Q96JS3 809 aa17.75■□□□□ 0.43
PALB2-205ENST00000567003 KCNH6Q9H252 994 aa17.75■□□□□ 0.43
PALB2-205ENST00000567003 JPH1Q9HDC5 661 aaPredicted RBP17.75■□□□□ 0.43
PALB2-205ENST00000567003 HCSTQ9UBK5 93 aa17.75■□□□□ 0.43
PALB2-205ENST00000567003 PCDHA6Q9UN73 950 aa17.75■□□□□ 0.43
PALB2-205ENST00000567003 PCDHA8Q9Y5H6 950 aa17.75■□□□□ 0.43
PALB2-205ENST00000567003 RBM8AQ9Y5S9 174 aaKnown RBP17.75■□□□□ 0.43
PALB2-205ENST00000567003 TMEM221A6NGB7 291 aa17.74■□□□□ 0.43
PALB2-205ENST00000567003 RRN3P2A6NIE6 340 aa17.74■□□□□ 0.43
PALB2-205ENST00000567003 M0R296 226 aa17.74■□□□□ 0.43
PALB2-205ENST00000567003 SH2B2O14492 632 aaPredicted RBP17.74■□□□□ 0.43
PALB2-205ENST00000567003 EYA4O95677 639 aa17.74■□□□□ 0.43
PALB2-205ENST00000567003 IER5Q5VY09 327 aa17.74■□□□□ 0.43
PALB2-205ENST00000567003 SMRP1Q8NCR6 262 aa17.74■□□□□ 0.43
PALB2-205ENST00000567003 MAP3K14Q99558 947 aa17.74■□□□□ 0.43
PALB2-205ENST00000567003 SLC9A2Q9UBY0 812 aa17.74■□□□□ 0.43
PALB2-205ENST00000567003 USP15Q9Y4E8 981 aaPredicted RBP17.74■□□□□ 0.43
PALB2-205ENST00000567003 IGSF9BQ9UPX0 1349 aa17.73■□□□□ 0.43
PALB2-205ENST00000567003 FNDC1Q4ZHG4 1894 aaPredicted RBP17.73■□□□□ 0.43
PALB2-205ENST00000567003 SPDYE3A6NKU9 549 aa17.73■□□□□ 0.43
PALB2-205ENST00000567003 M0QZ92 97 aa17.73■□□□□ 0.43
PALB2-205ENST00000567003 PER2O15055 1255 aa17.73■□□□□ 0.43
PALB2-205ENST00000567003 MGEA5O60502 916 aa17.73■□□□□ 0.43
PALB2-205ENST00000567003 CASC1Q6TDU7 716 aa17.73■□□□□ 0.43
PALB2-205ENST00000567003 TRIM67Q6ZTA4 783 aa17.73■□□□□ 0.43
PALB2-205ENST00000567003 HEATR3Q7Z4Q2 680 aa17.73■□□□□ 0.43
PALB2-205ENST00000567003 PPP2R3CQ969Q6 453 aa17.73■□□□□ 0.43
PALB2-205ENST00000567003 LZTS2Q9BRK4 669 aa17.73■□□□□ 0.43
PALB2-205ENST00000567003 FTHL17Q9BXU8 183 aa17.73■□□□□ 0.43
PALB2-205ENST00000567003 LRRC2Q9BYS8 371 aa17.73■□□□□ 0.43
PALB2-205ENST00000567003 CELF4Q9BZC1 486 aaKnown RBP17.73■□□□□ 0.43
PALB2-205ENST00000567003 LRFN2Q9ULH4 789 aa17.73■□□□□ 0.43
PALB2-205ENST00000567003 GINS2Q9Y248 185 aa17.73■□□□□ 0.43
PALB2-205ENST00000567003 PCDHA2Q9Y5H9 948 aa17.73■□□□□ 0.43
PALB2-205ENST00000567003 KMT2EQ8IZD2 1858 aa17.73■□□□□ 0.43
PALB2-205ENST00000567003 CCDC69A6NI79 296 aa17.72■□□□□ 0.43
PALB2-205ENST00000567003 LOC730098B7Z3J9 87 aa17.72■□□□□ 0.43
PALB2-205ENST00000567003 STAG3L1P0CL83 205 aa17.72■□□□□ 0.43
PALB2-205ENST00000567003 ARP10275 920 aa17.72■□□□□ 0.43
PALB2-205ENST00000567003 SMARCA1P28370 1054 aa17.72■□□□□ 0.43
PALB2-205ENST00000567003 ACTR2P61160 394 aa17.72■□□□□ 0.43
PALB2-205ENST00000567003 COASYQ13057 564 aa17.72■□□□□ 0.43
PALB2-205ENST00000567003 NAALADL2Q58DX5 795 aa17.72■□□□□ 0.43
PALB2-205ENST00000567003 VN1R2Q8NFZ6 395 aa17.72■□□□□ 0.43
PALB2-205ENST00000567003 MAP4K1Q92918 833 aa17.72■□□□□ 0.43
PALB2-205ENST00000567003 PBXIP1Q96AQ6 731 aa17.72■□□□□ 0.43
PALB2-205ENST00000567003 PPP1R16BQ96T49 567 aa17.72■□□□□ 0.43
PALB2-205ENST00000567003 AZI2Q9H6S1 392 aa17.72■□□□□ 0.43
PALB2-205ENST00000567003 CDHR5Q9HBB8 845 aa17.72■□□□□ 0.43
PALB2-205ENST00000567003 KCNH7Q9NS40 1196 aa17.72■□□□□ 0.43
PALB2-205ENST00000567003 EVPLQ92817 2033 aa17.71■□□□□ 0.43
PALB2-205ENST00000567003 GNAQP50148 359 aa17.71■□□□□ 0.43
PALB2-205ENST00000567003 ZXDAP98168 799 aa17.71■□□□□ 0.43
PALB2-205ENST00000567003 KRT76Q01546 638 aa17.71■□□□□ 0.43
PALB2-205ENST00000567003 NFX1Q12986 1120 aaKnown RBP17.71■□□□□ 0.43
PALB2-205ENST00000567003 ITGB3BPQ13352 177 aaPredicted RBP17.71■□□□□ 0.43
PALB2-205ENST00000567003 SPOUT1Q5T280 376 aaKnown RBP17.71■□□□□ 0.43
PALB2-205ENST00000567003 MTHFD1LQ6UB35 978 aa17.71■□□□□ 0.43
PALB2-205ENST00000567003 RPGRIP1Q96KN7 1286 aa17.71■□□□□ 0.43
PALB2-205ENST00000567003 YTHDC1Q96MU7 727 aaKnown RBP17.71■□□□□ 0.43
PALB2-205ENST00000567003 MXRA8Q9BRK3 442 aa17.71■□□□□ 0.43
PALB2-205ENST00000567003 TLE6Q9H808 572 aa17.71■□□□□ 0.43
PALB2-205ENST00000567003 SQORQ9Y6N5 450 aa17.71■□□□□ 0.43
PALB2-205ENST00000567003 CFAP54Q96N23 3096 aa17.7■□□□□ 0.42
PALB2-205ENST00000567003 TBKBP1A7MCY6 615 aa17.7■□□□□ 0.42
PALB2-205ENST00000567003 DDX39AO00148 427 aaKnown RBP17.7■□□□□ 0.42
PALB2-205ENST00000567003 SARSP49591 514 aaKnown RBP17.7■□□□□ 0.42
PALB2-205ENST00000567003 STAT5BP51692 787 aa17.7■□□□□ 0.42
PALB2-205ENST00000567003 FAM102BQ5T8I3 360 aa17.7■□□□□ 0.42
PALB2-205ENST00000567003 WWC2Q6AWC2 1192 aa17.7■□□□□ 0.42
PALB2-205ENST00000567003 TYW1BQ6NUM6 668 aa17.7■□□□□ 0.42
PALB2-205ENST00000567003 TMTC3Q6ZXV5 915 aa17.7■□□□□ 0.42
PALB2-205ENST00000567003 MICAL1Q8TDZ2 1067 aa17.7■□□□□ 0.42
PALB2-205ENST00000567003 TMEM40Q8WWA1 233 aa17.7■□□□□ 0.42
PALB2-205ENST00000567003 ERVK-5Q9HDB9 667 aa17.7■□□□□ 0.42
PALB2-205ENST00000567003 NOC2LQ9Y3T9 749 aaKnown RBP17.7■□□□□ 0.42
PALB2-205ENST00000567003 CACNA1HO95180 2353 aa17.7■□□□□ 0.42
PALB2-205ENST00000567003 SMIM35A0A1B0GVV1 85 aa17.69■□□□□ 0.42
PALB2-205ENST00000567003 ERVFC1P60507 584 aa17.69■□□□□ 0.42
PALB2-205ENST00000567003 APOBRQ0VD83 1088 aa17.69■□□□□ 0.42
PALB2-205ENST00000567003 CBX2Q14781 532 aaPredicted RBP17.69■□□□□ 0.42
PALB2-205ENST00000567003 MICU3Q86XE3 530 aa17.69■□□□□ 0.42
PALB2-205ENST00000567003 SDF4Q9BRK5 362 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms