RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 SESTD1Q86VW0 696 aa18.37■□□□□ 0.53
SCAMP2-208ENST00000566557 AFAP1L1Q8TED9 768 aa18.37■□□□□ 0.53
SCAMP2-208ENST00000566557 ATP6V0A1Q93050 837 aa18.37■□□□□ 0.53
SCAMP2-208ENST00000566557 TOX2Q96NM4 488 aa18.37■□□□□ 0.53
SCAMP2-208ENST00000566557 SETD4Q9NVD3 440 aa18.37■□□□□ 0.53
SCAMP2-208ENST00000566557 CDH23Q9H251 3354 aa18.37■□□□□ 0.53
SCAMP2-208ENST00000566557 POTEB3A0JP26 581 aa18.36■□□□□ 0.53
SCAMP2-208ENST00000566557 F13A1P00488 732 aa18.36■□□□□ 0.53
SCAMP2-208ENST00000566557 CYP2C9P11712 490 aa18.36■□□□□ 0.53
SCAMP2-208ENST00000566557 FOSL2P15408 326 aa18.36■□□□□ 0.53
SCAMP2-208ENST00000566557 SLC26A2P50443 739 aa18.36■□□□□ 0.53
SCAMP2-208ENST00000566557 ZNF200P98182 395 aaPredicted RBP18.36■□□□□ 0.53
SCAMP2-208ENST00000566557 PRKCEQ02156 737 aa18.36■□□□□ 0.53
SCAMP2-208ENST00000566557 CYP4A11Q02928 519 aa18.36■□□□□ 0.53
SCAMP2-208ENST00000566557 CEBPZQ03701 1054 aaKnown RBP18.36■□□□□ 0.53
SCAMP2-208ENST00000566557 FOXD4L6Q3SYB3 417 aaPredicted RBP18.36■□□□□ 0.53
SCAMP2-208ENST00000566557 C9orf50Q5SZB4 431 aa18.36■□□□□ 0.53
SCAMP2-208ENST00000566557 POTEBQ6S5H4 581 aa18.36■□□□□ 0.53
SCAMP2-208ENST00000566557 B3GNT9Q6UX72 402 aa18.36■□□□□ 0.53
SCAMP2-208ENST00000566557 FOXD4L3Q6VB84 417 aaPredicted RBP18.36■□□□□ 0.53
SCAMP2-208ENST00000566557 SH3RF1Q7Z6J0 888 aa18.36■□□□□ 0.53
SCAMP2-208ENST00000566557 TNPO1Q92973 898 aaKnown RBP18.36■□□□□ 0.53
SCAMP2-208ENST00000566557 PPP1R12CQ9BZL4 782 aa18.36■□□□□ 0.53
SCAMP2-208ENST00000566557 TTYH1Q9H313 450 aaPredicted RBP18.36■□□□□ 0.53
SCAMP2-208ENST00000566557 CEP131Q9UPN4 1083 aa18.36■□□□□ 0.53
SCAMP2-208ENST00000566557 LAD1O00515 517 aa18.35■□□□□ 0.53
SCAMP2-208ENST00000566557 CD4P01730 458 aa18.35■□□□□ 0.53
SCAMP2-208ENST00000566557 GNAT1P11488 350 aa18.35■□□□□ 0.53
SCAMP2-208ENST00000566557 RAG1P15918 1043 aa18.35■□□□□ 0.53
SCAMP2-208ENST00000566557 SPIRE1Q08AE8 756 aa18.35■□□□□ 0.53
SCAMP2-208ENST00000566557 EPHA7Q15375 998 aa18.35■□□□□ 0.53
SCAMP2-208ENST00000566557 SF3A1Q15459 793 aaKnown RBP18.35■□□□□ 0.53
SCAMP2-208ENST00000566557 GRIK4Q16099 956 aa18.35■□□□□ 0.53
SCAMP2-208ENST00000566557 ATP8B4Q8TF62 1192 aa18.35■□□□□ 0.53
SCAMP2-208ENST00000566557 LMBR1Q8WVP7 490 aa18.35■□□□□ 0.53
SCAMP2-208ENST00000566557 DYDC2Q96IM9 177 aa18.35■□□□□ 0.53
SCAMP2-208ENST00000566557 FAM167AQ96KS9 214 aa18.35■□□□□ 0.53
SCAMP2-208ENST00000566557 FTOQ9C0B1 505 aaKnown RBP eCLIP18.35■□□□□ 0.53
SCAMP2-208ENST00000566557 SEPT9Q9UHD8 586 aaPredicted RBP18.35■□□□□ 0.53
SCAMP2-208ENST00000566557 MAFBQ9Y5Q3 323 aaPredicted RBP18.35■□□□□ 0.53
SCAMP2-208ENST00000566557 LTBP2Q14767 1821 aa18.35■□□□□ 0.53
SCAMP2-208ENST00000566557 KAT6AQ92794 2004 aa18.34■□□□□ 0.53
SCAMP2-208ENST00000566557 NRCAMQ92823 1304 aa18.34■□□□□ 0.53
SCAMP2-208ENST00000566557 HBP1O60381 514 aa18.34■□□□□ 0.53
SCAMP2-208ENST00000566557 OATP04181 439 aa18.34■□□□□ 0.53
SCAMP2-208ENST00000566557 INSRRP14616 1297 aa18.34■□□□□ 0.53
SCAMP2-208ENST00000566557 PSMC5P62195 406 aa18.34■□□□□ 0.53
SCAMP2-208ENST00000566557 SMAD3P84022 425 aaKnown RBP18.34■□□□□ 0.53
SCAMP2-208ENST00000566557 ATP2C1P98194 919 aaPredicted RBP18.34■□□□□ 0.53
SCAMP2-208ENST00000566557 HIC1Q14526 733 aa18.34■□□□□ 0.53
SCAMP2-208ENST00000566557 DTHD1Q6ZMT9 781 aa18.34■□□□□ 0.53
SCAMP2-208ENST00000566557 C4orf32Q8N8J7 132 aa18.34■□□□□ 0.53
SCAMP2-208ENST00000566557 TRAPPC12Q8WVT3 735 aa18.34■□□□□ 0.53
SCAMP2-208ENST00000566557 EIF2AK1Q9BQI3 630 aaKnown RBP18.34■□□□□ 0.53
SCAMP2-208ENST00000566557 LXNQ9BS40 222 aa18.34■□□□□ 0.53
SCAMP2-208ENST00000566557 RAB34Q9BZG1 259 aa18.34■□□□□ 0.53
SCAMP2-208ENST00000566557 HIPK3Q9H422 1215 aa18.34■□□□□ 0.53
SCAMP2-208ENST00000566557 CLIC4Q9Y696 253 aa18.34■□□□□ 0.53
SCAMP2-208ENST00000566557 TRIM43BA6NCK2 446 aa18.33■□□□□ 0.52
SCAMP2-208ENST00000566557 TREHO43280 583 aa18.33■□□□□ 0.52
SCAMP2-208ENST00000566557 ZNF862O60290 1169 aa18.33■□□□□ 0.52
SCAMP2-208ENST00000566557 DKC1O60832 514 aaKnown RBP eCLIP18.33■□□□□ 0.52
SCAMP2-208ENST00000566557 BMP15O95972 392 aa18.33■□□□□ 0.52
SCAMP2-208ENST00000566557 P4HBP07237 508 aaKnown RBP18.33■□□□□ 0.52
SCAMP2-208ENST00000566557 ATP4AP20648 1035 aa18.33■□□□□ 0.52
SCAMP2-208ENST00000566557 PRPHP41219 470 aa18.33■□□□□ 0.52
SCAMP2-208ENST00000566557 QARSP47897 775 aaKnown RBP18.33■□□□□ 0.52
SCAMP2-208ENST00000566557 CTTNQ14247 550 aaKnown RBP18.33■□□□□ 0.52
SCAMP2-208ENST00000566557 TPH2Q8IWU9 490 aa18.33■□□□□ 0.52
SCAMP2-208ENST00000566557 CCDC155Q8N6L0 562 aa18.33■□□□□ 0.52
SCAMP2-208ENST00000566557 ERMNQ8TAM6 284 aa18.33■□□□□ 0.52
SCAMP2-208ENST00000566557 NEK9Q8TD19 979 aa18.33■□□□□ 0.52
SCAMP2-208ENST00000566557 BBXQ8WY36 941 aaPredicted RBP18.33■□□□□ 0.52
SCAMP2-208ENST00000566557 TRIM43Q96BQ3 446 aaPredicted RBP18.33■□□□□ 0.52
SCAMP2-208ENST00000566557 RGL1Q9NZL6 768 aa18.33■□□□□ 0.52
SCAMP2-208ENST00000566557 TUBE1Q9UJT0 475 aa18.33■□□□□ 0.52
SCAMP2-208ENST00000566557 TBX21Q9UL17 535 aa18.33■□□□□ 0.52
SCAMP2-208ENST00000566557 TRIP12Q14669 1992 aaPredicted RBP18.33■□□□□ 0.52
SCAMP2-208ENST00000566557 VWA3AA6NCI4 1184 aa18.32■□□□□ 0.52
SCAMP2-208ENST00000566557 RRN3P2A6NIE6 340 aa18.32■□□□□ 0.52
SCAMP2-208ENST00000566557 TNFRSF10AO00220 468 aa18.32■□□□□ 0.52
SCAMP2-208ENST00000566557 FXR2P51116 673 aaKnown RBP eCLIP18.32■□□□□ 0.52
SCAMP2-208ENST00000566557 BADQ92934 168 aa18.32■□□□□ 0.52
SCAMP2-208ENST00000566557 ZBTB10Q96DT7 871 aa18.32■□□□□ 0.52
SCAMP2-208ENST00000566557 ZNF396Q96N95 335 aaPredicted RBP18.32■□□□□ 0.52
SCAMP2-208ENST00000566557 USP28Q96RU2 1077 aa18.32■□□□□ 0.52
SCAMP2-208ENST00000566557 NRBP2Q9NSY0 501 aa18.32■□□□□ 0.52
SCAMP2-208ENST00000566557 LRWD1Q9UFC0 647 aa18.32■□□□□ 0.52
SCAMP2-208ENST00000566557 RAPGEFL1Q9UHV5 662 aa18.32■□□□□ 0.52
SCAMP2-208ENST00000566557 TANC1Q9C0D5 1861 aa18.32■□□□□ 0.52
SCAMP2-208ENST00000566557 COL1A2P08123 1366 aa18.31■□□□□ 0.52
SCAMP2-208ENST00000566557 UMODL1Q5DID0 1318 aa18.31■□□□□ 0.52
SCAMP2-208ENST00000566557 TMEM150BA6NC51 233 aa18.31■□□□□ 0.52
SCAMP2-208ENST00000566557 DDX11L8A8MPP1 907 aa18.31■□□□□ 0.52
SCAMP2-208ENST00000566557 KIAA0355O15063 1070 aa18.31■□□□□ 0.52
SCAMP2-208ENST00000566557 PTK7Q13308 1070 aa18.31■□□□□ 0.52
SCAMP2-208ENST00000566557 BFSP2Q13515 415 aa18.31■□□□□ 0.52
SCAMP2-208ENST00000566557 MTERF2Q49AM1 385 aa18.31■□□□□ 0.52
SCAMP2-208ENST00000566557 XKR3Q5GH77 459 aa18.31■□□□□ 0.52
SCAMP2-208ENST00000566557 TJAP1Q5JTD0 557 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms