RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 FAM184BQ9ULE4 1060 aa20.58■□□□□ 0.89
MSLN-207ENST00000566549 PDE2AO00408 941 aaPredicted RBP20.58■□□□□ 0.88
MSLN-207ENST00000566549 LCA5LO95447 670 aa20.58■□□□□ 0.88
MSLN-207ENST00000566549 NAP1L1P55209 391 aaKnown RBP20.58■□□□□ 0.88
MSLN-207ENST00000566549 AGBL3Q8NEM8 1001 aa20.58■□□□□ 0.88
MSLN-207ENST00000566549 TRIM58Q8NG06 486 aa20.58■□□□□ 0.88
MSLN-207ENST00000566549 EDEM3Q9BZQ6 932 aa20.58■□□□□ 0.88
MSLN-207ENST00000566549 PCDHB13Q9Y5F0 798 aa20.58■□□□□ 0.88
MSLN-207ENST00000566549 NFIBO00712 420 aa20.57■□□□□ 0.88
MSLN-207ENST00000566549 TBC1D12O60347 775 aa20.57■□□□□ 0.88
MSLN-207ENST00000566549 ASNSP08243 561 aa20.57■□□□□ 0.88
MSLN-207ENST00000566549 GABPB1Q06547 395 aaPredicted RBP20.57■□□□□ 0.88
MSLN-207ENST00000566549 PPP2R5CQ13362 524 aa20.57■□□□□ 0.88
MSLN-207ENST00000566549 RASA3Q14644 834 aa20.57■□□□□ 0.88
MSLN-207ENST00000566549 FAM83AQ86UY5 434 aa20.57■□□□□ 0.88
MSLN-207ENST00000566549 BANK1Q8NDB2 785 aa20.57■□□□□ 0.88
MSLN-207ENST00000566549 MYOZ2Q9NPC6 264 aa20.57■□□□□ 0.88
MSLN-207ENST00000566549 PDXKO00764 312 aa20.57■□□□□ 0.88
MSLN-207ENST00000566549 NCK2O43639 380 aa20.57■□□□□ 0.88
MSLN-207ENST00000566549 XRCC5P13010 732 aaKnown RBP20.57■□□□□ 0.88
MSLN-207ENST00000566549 BEND6Q5SZJ8 279 aaPredicted RBP20.57■□□□□ 0.88
MSLN-207ENST00000566549 HOOK2Q96ED9 719 aa20.57■□□□□ 0.88
MSLN-207ENST00000566549 EHMT1Q9H9B1 1298 aa20.57■□□□□ 0.88
MSLN-207ENST00000566549 TUFT1Q9NNX1 390 aa20.57■□□□□ 0.88
MSLN-207ENST00000566549 TYW1Q9NV66 732 aaKnown RBP20.57■□□□□ 0.88
MSLN-207ENST00000566549 ANO9A1A5B4 782 aa20.56■□□□□ 0.88
MSLN-207ENST00000566549 SERPING1P05155 500 aa20.56■□□□□ 0.88
MSLN-207ENST00000566549 CXCR5P32302 372 aa20.56■□□□□ 0.88
MSLN-207ENST00000566549 FKBP1CQ5VVH2 108 aa20.56■□□□□ 0.88
MSLN-207ENST00000566549 C1orf186Q6ZWK4 172 aa20.56■□□□□ 0.88
MSLN-207ENST00000566549 GANQ9H2C0 597 aa20.56■□□□□ 0.88
MSLN-207ENST00000566549 COL20A1Q9P218 1284 aa20.56■□□□□ 0.88
MSLN-207ENST00000566549 PGAP2Q9UHJ9 254 aa20.56■□□□□ 0.88
MSLN-207ENST00000566549 SSU72P8A0A1W2PR75 194 aa20.56■□□□□ 0.88
MSLN-207ENST00000566549 IPO5O00410 1097 aaKnown RBP20.56■□□□□ 0.88
MSLN-207ENST00000566549 ATP8B1O43520 1251 aa20.56■□□□□ 0.88
MSLN-207ENST00000566549 AFPP02771 609 aaKnown RBP20.56■□□□□ 0.88
MSLN-207ENST00000566549 MAPK8IP2Q13387 824 aaPredicted RBP20.56■□□□□ 0.88
MSLN-207ENST00000566549 TERF2Q15554 542 aa20.56■□□□□ 0.88
MSLN-207ENST00000566549 MAEAQ7L5Y9 396 aa20.56■□□□□ 0.88
MSLN-207ENST00000566549 FRMD5Q7Z6J6 570 aa20.56■□□□□ 0.88
MSLN-207ENST00000566549 IL31RAQ8NI17 732 aa20.56■□□□□ 0.88
MSLN-207ENST00000566549 LXNQ9BS40 222 aa20.56■□□□□ 0.88
MSLN-207ENST00000566549 ZCCHC17Q9NP64 241 aaKnown RBP20.56■□□□□ 0.88
MSLN-207ENST00000566549 JRKLQ9Y4A0 524 aa20.56■□□□□ 0.88
MSLN-207ENST00000566549 RGPD3A6NKT7 1758 aaPredicted RBP20.55■□□□□ 0.88
MSLN-207ENST00000566549 RGPD4Q7Z3J3 1758 aa20.55■□□□□ 0.88
MSLN-207ENST00000566549 ZMYND10O75800 440 aa20.55■□□□□ 0.88
MSLN-207ENST00000566549 C2orf54Q08AI8 447 aa20.55■□□□□ 0.88
MSLN-207ENST00000566549 KLHL30Q0D2K2 578 aa20.55■□□□□ 0.88
MSLN-207ENST00000566549 SMC1AQ14683 1233 aaKnown RBP20.55■□□□□ 0.88
MSLN-207ENST00000566549 COG2Q14746 738 aa20.55■□□□□ 0.88
MSLN-207ENST00000566549 NFRKBQ6P4R8 1299 aa20.55■□□□□ 0.88
MSLN-207ENST00000566549 COG1Q8WTW3 980 aa20.55■□□□□ 0.88
MSLN-207ENST00000566549 ALS2CR12Q96Q35 445 aa20.55■□□□□ 0.88
MSLN-207ENST00000566549 HINFPQ9BQA5 517 aa20.55■□□□□ 0.88
MSLN-207ENST00000566549 SMARCAL1Q9NZC9 954 aa20.55■□□□□ 0.88
MSLN-207ENST00000566549 PPP1R1BQ9UD71 204 aaPredicted RBP20.55■□□□□ 0.88
MSLN-207ENST00000566549 ADAMTS1Q9UHI8 967 aa20.55■□□□□ 0.88
MSLN-207ENST00000566549 ERLIN1O75477 346 aa20.55■□□□□ 0.88
MSLN-207ENST00000566549 ITGB5P18084 799 aa20.55■□□□□ 0.88
MSLN-207ENST00000566549 PTGER2P43116 358 aa20.55■□□□□ 0.88
MSLN-207ENST00000566549 TUBB4BP68371 445 aa20.55■□□□□ 0.88
MSLN-207ENST00000566549 CIAPIN1Q6FI81 312 aa20.55■□□□□ 0.88
MSLN-207ENST00000566549 ZNF771Q7L3S4 317 aaPredicted RBP20.55■□□□□ 0.88
MSLN-207ENST00000566549 TRMT1LQ7Z2T5 733 aaKnown RBP20.55■□□□□ 0.88
MSLN-207ENST00000566549 MTMR14Q8NCE2 650 aa20.55■□□□□ 0.88
MSLN-207ENST00000566549 PARVGQ9HBI0 331 aa20.55■□□□□ 0.88
MSLN-207ENST00000566549 SNX12Q9UMY4 172 aa20.55■□□□□ 0.88
MSLN-207ENST00000566549 ZNF536O15090 1300 aa20.55■□□□□ 0.88
MSLN-207ENST00000566549 TGFB1I1O43294 461 aa20.54■□□□□ 0.88
MSLN-207ENST00000566549 ALAS1P13196 640 aa20.54■□□□□ 0.88
MSLN-207ENST00000566549 OAS2P29728 719 aaKnown RBP20.54■□□□□ 0.88
MSLN-207ENST00000566549 DNA2P51530 1060 aa20.54■□□□□ 0.88
MSLN-207ENST00000566549 CKAP4Q07065 602 aaKnown RBP20.54■□□□□ 0.88
MSLN-207ENST00000566549 PLS1Q14651 629 aa20.54■□□□□ 0.88
MSLN-207ENST00000566549 EXOC3L4Q17RC7 722 aa20.54■□□□□ 0.88
MSLN-207ENST00000566549 BMT2Q1RMZ1 405 aa20.54■□□□□ 0.88
MSLN-207ENST00000566549 SPAG5Q96R06 1193 aa20.54■□□□□ 0.88
MSLN-207ENST00000566549 TEKT3Q9BXF9 490 aa20.54■□□□□ 0.88
MSLN-207ENST00000566549 NUCKS1Q9H1E3 243 aaKnown RBP20.54■□□□□ 0.88
MSLN-207ENST00000566549 EHD2Q9NZN4 543 aa20.54■□□□□ 0.88
MSLN-207ENST00000566549 A0A087X0T9 212 aa20.54■□□□□ 0.88
MSLN-207ENST00000566549 ICAM1P05362 532 aa20.54■□□□□ 0.88
MSLN-207ENST00000566549 FAM228BP0C875 321 aa20.54■□□□□ 0.88
MSLN-207ENST00000566549 EPB41P11171 864 aaKnown RBP20.54■□□□□ 0.88
MSLN-207ENST00000566549 ASIC2Q16515 512 aa20.54■□□□□ 0.88
MSLN-207ENST00000566549 DNAAF5Q86Y56 855 aa20.54■□□□□ 0.88
MSLN-207ENST00000566549 HNRNPLLQ8WVV9 542 aaKnown RBP20.54■□□□□ 0.88
MSLN-207ENST00000566549 PACSIN1Q9BY11 444 aa20.54■□□□□ 0.88
MSLN-207ENST00000566549 WDR11Q9BZH6 1224 aa20.54■□□□□ 0.88
MSLN-207ENST00000566549 RAVER2Q9HCJ3 691 aaKnown RBP20.54■□□□□ 0.88
MSLN-207ENST00000566549 OLFML3Q9NRN5 406 aa20.54■□□□□ 0.88
MSLN-207ENST00000566549 ZHX1Q9UKY1 873 aaPredicted RBP20.54■□□□□ 0.88
MSLN-207ENST00000566549 ZMYM2Q9UBW7 1377 aa20.54■□□□□ 0.88
MSLN-207ENST00000566549 PHF20L1A8MW92 1017 aa20.53■□□□□ 0.88
MSLN-207ENST00000566549 ZBTB7AO95365 584 aa20.53■□□□□ 0.88
MSLN-207ENST00000566549 RPL13P26373 211 aaKnown RBP20.53■□□□□ 0.88
MSLN-207ENST00000566549 USP14P54578 494 aa20.53■□□□□ 0.88
MSLN-207ENST00000566549 JDP2Q8WYK2 163 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms