RNA–Protein interactions for RNA: ENST00000566225.1

LINC01254-201, Transcript of long intergenic non-protein coding RNA 1254, humanhuman

BASIC

Gene LINC01254, Length 2,908 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01254-201ENST00000566225 DIXDC1Q155Q3 683 aa13.08□□□□□ -0.32
LINC01254-201ENST00000566225 IFI16Q16666 785 aaKnown RBP13.08□□□□□ -0.32
LINC01254-201ENST00000566225 DCAF17Q5H9S7 520 aaPredicted RBP13.08□□□□□ -0.32
LINC01254-201ENST00000566225 TCERG1LQ5VWI1 586 aa13.08□□□□□ -0.32
LINC01254-201ENST00000566225 INTS5Q6P9B9 1019 aaKnown RBP13.08□□□□□ -0.32
LINC01254-201ENST00000566225 MAPKAPK5Q8IW41 473 aa13.08□□□□□ -0.32
LINC01254-201ENST00000566225 LRRC34Q8IZ02 419 aa13.08□□□□□ -0.32
LINC01254-201ENST00000566225 CUL5Q93034 780 aa13.08□□□□□ -0.32
LINC01254-201ENST00000566225 BMP2KQ9NSY1 1161 aaPredicted RBP13.08□□□□□ -0.32
LINC01254-201ENST00000566225 FRMPD2Q68DX3 1309 aaPredicted RBP13.08□□□□□ -0.32
LINC01254-201ENST00000566225 SPDYE3A6NKU9 549 aa13.08□□□□□ -0.32
LINC01254-201ENST00000566225 CCDC188H7C350 402 aa13.08□□□□□ -0.32
LINC01254-201ENST00000566225 CDC25CP30307 473 aa13.08□□□□□ -0.32
LINC01254-201ENST00000566225 CRKLP46109 303 aaKnown RBP13.08□□□□□ -0.32
LINC01254-201ENST00000566225 PLTPP55058 493 aa13.08□□□□□ -0.32
LINC01254-201ENST00000566225 TLDC1Q6P9B6 456 aa13.08□□□□□ -0.32
LINC01254-201ENST00000566225 FBXO33Q7Z6M2 555 aa13.08□□□□□ -0.32
LINC01254-201ENST00000566225 CCDC24Q8N4L8 307 aa13.08□□□□□ -0.32
LINC01254-201ENST00000566225 U2AF1L4Q8WU68 220 aaKnown RBP13.08□□□□□ -0.32
LINC01254-201ENST00000566225 NSMCE1Q8WV22 266 aa13.08□□□□□ -0.32
LINC01254-201ENST00000566225 GLG1Q92896 1179 aa13.08□□□□□ -0.32
LINC01254-201ENST00000566225 FAXDC2Q96IV6 333 aa13.08□□□□□ -0.32
LINC01254-201ENST00000566225 CCDC87Q9NVE4 849 aa13.08□□□□□ -0.32
LINC01254-201ENST00000566225 CD2APQ9Y5K6 639 aa13.08□□□□□ -0.32
LINC01254-201ENST00000566225 CCDC189A1A4V9 331 aa13.07□□□□□ -0.32
LINC01254-201ENST00000566225 KRT18P05783 430 aaKnown RBP13.07□□□□□ -0.32
LINC01254-201ENST00000566225 UCHL3P15374 230 aa13.07□□□□□ -0.32
LINC01254-201ENST00000566225 NR2F2P24468 414 aa13.07□□□□□ -0.32
LINC01254-201ENST00000566225 FXR2P51116 673 aaKnown RBP eCLIP13.07□□□□□ -0.32
LINC01254-201ENST00000566225 IFI35P80217 286 aaPredicted RBP13.07□□□□□ -0.32
LINC01254-201ENST00000566225 ZNF211Q13398 564 aaPredicted RBP13.07□□□□□ -0.32
LINC01254-201ENST00000566225 CRYMQ14894 314 aa13.07□□□□□ -0.32
LINC01254-201ENST00000566225 GJB7Q6PEY0 223 aa13.07□□□□□ -0.32
LINC01254-201ENST00000566225 MAGEC3Q8TD91 643 aa13.07□□□□□ -0.32
LINC01254-201ENST00000566225 BSDC1Q9NW68 430 aaPredicted RBP13.07□□□□□ -0.32
LINC01254-201ENST00000566225 HDAC9Q9UKV0 1011 aa13.07□□□□□ -0.32
LINC01254-201ENST00000566225 CES2O00748 559 aa13.07□□□□□ -0.32
LINC01254-201ENST00000566225 H2AFZP0C0S5 128 aa13.07□□□□□ -0.32
LINC01254-201ENST00000566225 UBE2SQ16763 222 aa13.07□□□□□ -0.32
LINC01254-201ENST00000566225 ARHGAP27Q6ZUM4 889 aa13.07□□□□□ -0.32
LINC01254-201ENST00000566225 H2AFVQ71UI9 128 aa13.07□□□□□ -0.32
LINC01254-201ENST00000566225 BRINP3Q76B58 766 aa13.07□□□□□ -0.32
LINC01254-201ENST00000566225 TXNRD3Q86VQ6 643 aa13.07□□□□□ -0.32
LINC01254-201ENST00000566225 RBM46Q8TBY0 533 aaKnown RBP13.07□□□□□ -0.32
LINC01254-201ENST00000566225 SCFD1Q8WVM8 642 aa13.07□□□□□ -0.32
LINC01254-201ENST00000566225 CEP63Q96MT8 703 aa13.07□□□□□ -0.32
LINC01254-201ENST00000566225 PRMT1Q99873 361 aaKnown RBP13.07□□□□□ -0.32
LINC01254-201ENST00000566225 SPZ1Q9BXG8 430 aa13.07□□□□□ -0.32
LINC01254-201ENST00000566225 AZI2Q9H6S1 392 aa13.07□□□□□ -0.32
LINC01254-201ENST00000566225 CNOT10Q9H9A5 744 aaKnown RBP13.07□□□□□ -0.32
LINC01254-201ENST00000566225 OSGEPQ9NPF4 335 aa13.07□□□□□ -0.32
LINC01254-201ENST00000566225 SNX24Q9Y343 169 aa13.07□□□□□ -0.32
LINC01254-201ENST00000566225 COL4A1P02462 1669 aa13.07□□□□□ -0.32
LINC01254-201ENST00000566225 HGSO14964 777 aaPredicted RBP13.06□□□□□ -0.32
LINC01254-201ENST00000566225 CETN3O15182 167 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 FLOT1O75955 427 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 GHRP10912 638 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 ABCB4P21439 1286 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 NBPF9Q3BBW0 867 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 UBAP2Q5T6F2 1119 aaKnown RBP13.06□□□□□ -0.32
LINC01254-201ENST00000566225 TLCD1Q96CP7 247 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 RSRC1Q96IZ7 334 aaKnown RBP13.06□□□□□ -0.32
LINC01254-201ENST00000566225 TRIM6Q9C030 488 aaPredicted RBP13.06□□□□□ -0.32
LINC01254-201ENST00000566225 SLITRK6Q9H5Y7 841 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 FAM114A2Q9NRY5 505 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 EMILIN3Q9NT22 766 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 SAMD15Q9P1V8 674 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 KIAA1024Q9UPX6 916 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 MYH3P11055 1940 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 CACNA1SQ13698 1873 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 USP17L5A8MUK1 530 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 EDIL3O43854 480 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 GNA14O95837 355 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 RASA1P20936 1047 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 HOOK3Q86VS8 718 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 ATP8B4Q8TF62 1192 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 P3H4Q92791 437 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 ZNF317Q96PQ6 595 aaPredicted RBP13.06□□□□□ -0.32
LINC01254-201ENST00000566225 LZTS2Q9BRK4 669 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 LRRC27Q9C0I9 530 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 ABCF3Q9NUQ8 709 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 INTS9Q9NV88 658 aaKnown RBP13.06□□□□□ -0.32
LINC01254-201ENST00000566225 AJAP1Q9UKB5 411 aaPredicted RBP13.06□□□□□ -0.32
LINC01254-201ENST00000566225 RGS16O15492 202 aaPredicted RBP13.06□□□□□ -0.32
LINC01254-201ENST00000566225 EXOC3L4Q17RC7 722 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 TMEM119Q4V9L6 283 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 CCDC38Q502W7 563 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 DENND2CQ68D51 928 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 NAIF1Q69YI7 327 aaPredicted RBP13.06□□□□□ -0.32
LINC01254-201ENST00000566225 NT5DC3Q86UY8 548 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 GPBP1Q86WP2 473 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 CCDC65Q8IXS2 484 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 EYA3Q99504 573 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 AGAP1Q9UPQ3 857 aa13.06□□□□□ -0.32
LINC01254-201ENST00000566225 BCL9O00512 1426 aa13.05□□□□□ -0.32
LINC01254-201ENST00000566225 ARAP2Q8WZ64 1704 aa13.05□□□□□ -0.32
LINC01254-201ENST00000566225 ANP32DO95626 131 aa13.05□□□□□ -0.32
LINC01254-201ENST00000566225 ZBTB48P10074 688 aaPredicted RBP13.05□□□□□ -0.32
LINC01254-201ENST00000566225 DR1Q01658 176 aa13.05□□□□□ -0.32
LINC01254-201ENST00000566225 LRCH2Q5VUJ6 765 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms