RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 KCNC3Q14003 757 aa14.66□□□□□ -0.06
RNF40-208ENST00000565995 TMEM184AQ6ZMB5 413 aa14.66□□□□□ -0.06
RNF40-208ENST00000565995 CATIPQ7Z7H3 387 aa14.66□□□□□ -0.06
RNF40-208ENST00000565995 NME8Q8N427 588 aa14.66□□□□□ -0.06
RNF40-208ENST00000565995 TNPO1Q92973 898 aaKnown RBP14.66□□□□□ -0.06
RNF40-208ENST00000565995 PCYT2Q99447 389 aa14.66□□□□□ -0.06
RNF40-208ENST00000565995 USP15Q9Y4E8 981 aaPredicted RBP14.66□□□□□ -0.06
RNF40-208ENST00000565995 E7EWF7 191 aa14.65□□□□□ -0.06
RNF40-208ENST00000565995 IGHDP01880 384 aa14.65□□□□□ -0.06
RNF40-208ENST00000565995 SCG2P13521 617 aa14.65□□□□□ -0.06
RNF40-208ENST00000565995 NRIP1P48552 1158 aa14.65□□□□□ -0.06
RNF40-208ENST00000565995 NUBP1P53384 320 aa14.65□□□□□ -0.06
RNF40-208ENST00000565995 SART3Q15020 963 aaKnown RBP14.65□□□□□ -0.06
RNF40-208ENST00000565995 PDE12Q6L8Q7 609 aaKnown RBP14.65□□□□□ -0.06
RNF40-208ENST00000565995 PLPPR4Q7Z2D5 763 aa14.65□□□□□ -0.06
RNF40-208ENST00000565995 SUGP1Q8IWZ8 645 aaKnown RBP14.65□□□□□ -0.06
RNF40-208ENST00000565995 NCOA7Q8NI08 942 aa14.65□□□□□ -0.06
RNF40-208ENST00000565995 GLG1Q92896 1179 aa14.65□□□□□ -0.06
RNF40-208ENST00000565995 RRP36Q96EU6 259 aaKnown RBP14.65□□□□□ -0.06
RNF40-208ENST00000565995 ASIC4Q96FT7 647 aa14.65□□□□□ -0.06
RNF40-208ENST00000565995 CDCA3Q99618 268 aaPredicted RBP14.65□□□□□ -0.06
RNF40-208ENST00000565995 LZTS2Q9BRK4 669 aa14.65□□□□□ -0.06
RNF40-208ENST00000565995 MTA3Q9BTC8 594 aa14.65□□□□□ -0.06
RNF40-208ENST00000565995 CELF4Q9BZC1 486 aaKnown RBP14.65□□□□□ -0.06
RNF40-208ENST00000565995 IRF2BPLQ9H1B7 796 aa14.65□□□□□ -0.06
RNF40-208ENST00000565995 TMX1Q9H3N1 280 aa14.65□□□□□ -0.06
RNF40-208ENST00000565995 TRPV2Q9Y5S1 764 aa14.65□□□□□ -0.06
RNF40-208ENST00000565995 DENND4AQ7Z401 1863 aa14.65□□□□□ -0.06
RNF40-208ENST00000565995 SMIM35A0A1B0GVV1 85 aa14.64□□□□□ -0.07
RNF40-208ENST00000565995 SARSP49591 514 aaKnown RBP14.64□□□□□ -0.07
RNF40-208ENST00000565995 ANTXR2P58335 489 aa14.64□□□□□ -0.07
RNF40-208ENST00000565995 RASGRP4Q8TDF6 673 aa14.64□□□□□ -0.07
RNF40-208ENST00000565995 TLE6Q9H808 572 aa14.64□□□□□ -0.07
RNF40-208ENST00000565995 JADE2Q9NQC1 790 aa14.64□□□□□ -0.07
RNF40-208ENST00000565995 RNF216Q9NWF9 866 aaPredicted RBP14.64□□□□□ -0.07
RNF40-208ENST00000565995 RIF1Q5UIP0 2472 aaKnown RBP14.64□□□□□ -0.07
RNF40-208ENST00000565995 FAM186AA6NE01 2351 aa14.63□□□□□ -0.07
RNF40-208ENST00000565995 DCHS1Q96JQ0 3298 aa14.63□□□□□ -0.07
RNF40-208ENST00000565995 M0QZ92 97 aa14.63□□□□□ -0.07
RNF40-208ENST00000565995 FSCN2O14926 492 aa14.63□□□□□ -0.07
RNF40-208ENST00000565995 DDAH1O94760 285 aa14.63□□□□□ -0.07
RNF40-208ENST00000565995 ATG7O95352 703 aa14.63□□□□□ -0.07
RNF40-208ENST00000565995 MARK3P27448 753 aa14.63□□□□□ -0.07
RNF40-208ENST00000565995 KIF5BP33176 963 aa14.63□□□□□ -0.07
RNF40-208ENST00000565995 PTH1RQ03431 593 aa14.63□□□□□ -0.07
RNF40-208ENST00000565995 MTMR1Q13613 665 aa14.63□□□□□ -0.07
RNF40-208ENST00000565995 DUSP6Q16828 381 aa14.63□□□□□ -0.07
RNF40-208ENST00000565995 S1PR5Q9H228 398 aa14.63□□□□□ -0.07
RNF40-208ENST00000565995 PSTPIP2Q9H939 334 aa14.63□□□□□ -0.07
RNF40-208ENST00000565995 BARX2Q9UMQ3 279 aaPredicted RBP14.63□□□□□ -0.07
RNF40-208ENST00000565995 PCDHB12Q9Y5F1 795 aa14.63□□□□□ -0.07
RNF40-208ENST00000565995 TAF6LQ9Y6J9 622 aa14.63□□□□□ -0.07
RNF40-208ENST00000565995 NFASCO94856 1347 aa14.63□□□□□ -0.07
RNF40-208ENST00000565995 PTPRZ1P23471 2315 aaPredicted RBP14.63□□□□□ -0.07
RNF40-208ENST00000565995 AVPR2P30518 371 aa14.62□□□□□ -0.07
RNF40-208ENST00000565995 GNAQP50148 359 aa14.62□□□□□ -0.07
RNF40-208ENST00000565995 PAK2Q13177 524 aa14.62□□□□□ -0.07
RNF40-208ENST00000565995 PLCB4Q15147 1175 aa14.62□□□□□ -0.07
RNF40-208ENST00000565995 PAN2Q504Q3 1202 aaKnown RBP14.62□□□□□ -0.07
RNF40-208ENST00000565995 RALYLQ86SE5 291 aaKnown RBP14.62□□□□□ -0.07
RNF40-208ENST00000565995 RBM23Q86U06 439 aaKnown RBP14.62□□□□□ -0.07
RNF40-208ENST00000565995 TEX2Q8IWB9 1127 aa14.62□□□□□ -0.07
RNF40-208ENST00000565995 MB21D2Q8IYB1 491 aaPredicted RBP14.62□□□□□ -0.07
RNF40-208ENST00000565995 ZNF654Q8IZM8 581 aa14.62□□□□□ -0.07
RNF40-208ENST00000565995 VN1R2Q8NFZ6 395 aa14.62□□□□□ -0.07
RNF40-208ENST00000565995 CTCFLQ8NI51 663 aaPredicted RBP14.62□□□□□ -0.07
RNF40-208ENST00000565995 ZBTB10Q96DT7 871 aa14.62□□□□□ -0.07
RNF40-208ENST00000565995 FAM49AQ9H0Q0 323 aaPredicted RBP14.62□□□□□ -0.07
RNF40-208ENST00000565995 LY9Q9HBG7 655 aa14.62□□□□□ -0.07
RNF40-208ENST00000565995 TLR9Q9NR96 1032 aa14.62□□□□□ -0.07
RNF40-208ENST00000565995 AAASQ9NRG9 546 aa14.62□□□□□ -0.07
RNF40-208ENST00000565995 RGS18Q9NS28 235 aa14.62□□□□□ -0.07
RNF40-208ENST00000565995 SLC9A2Q9UBY0 812 aa14.62□□□□□ -0.07
RNF40-208ENST00000565995 SEC63Q9UGP8 760 aaKnown RBP14.62□□□□□ -0.07
RNF40-208ENST00000565995 LZTS1Q9Y250 596 aa14.62□□□□□ -0.07
RNF40-208ENST00000565995 IGKV6D-21A0A0A0MT36 114 aa14.61□□□□□ -0.07
RNF40-208ENST00000565995 PROB1E7EW31 1015 aa14.61□□□□□ -0.07
RNF40-208ENST00000565995 GATMP50440 423 aa14.61□□□□□ -0.07
RNF40-208ENST00000565995 SLC26A2P50443 739 aa14.61□□□□□ -0.07
RNF40-208ENST00000565995 ERVFC1P60507 584 aa14.61□□□□□ -0.07
RNF40-208ENST00000565995 IGBP1P78318 339 aa14.61□□□□□ -0.07
RNF40-208ENST00000565995 FAM189BP81408 668 aa14.61□□□□□ -0.07
RNF40-208ENST00000565995 KRT76Q01546 638 aa14.61□□□□□ -0.07
RNF40-208ENST00000565995 PTPN21Q16825 1174 aa14.61□□□□□ -0.07
RNF40-208ENST00000565995 MTHFD1LQ6UB35 978 aa14.61□□□□□ -0.07
RNF40-208ENST00000565995 SRBD1Q8N5C6 995 aaKnown RBP14.61□□□□□ -0.07
RNF40-208ENST00000565995 PIBF1Q8WXW3 757 aa14.61□□□□□ -0.07
RNF40-208ENST00000565995 NEK1Q96PY6 1258 aa14.61□□□□□ -0.07
RNF40-208ENST00000565995 AZI2Q9H6S1 392 aa14.61□□□□□ -0.07
RNF40-208ENST00000565995 ERVK-5Q9HDB9 667 aa14.61□□□□□ -0.07
RNF40-208ENST00000565995 JPH1Q9HDC5 661 aaPredicted RBP14.61□□□□□ -0.07
RNF40-208ENST00000565995 KCNH7Q9NS40 1196 aa14.61□□□□□ -0.07
RNF40-208ENST00000565995 C1orf112Q9NSG2 853 aa14.61□□□□□ -0.07
RNF40-208ENST00000565995 LRFN2Q9ULH4 789 aa14.61□□□□□ -0.07
RNF40-208ENST00000565995 PCDHB7Q9Y5E2 793 aa14.61□□□□□ -0.07
RNF40-208ENST00000565995 PCDHGC5Q9Y5F6 944 aa14.61□□□□□ -0.07
RNF40-208ENST00000565995 C2orf16Q68DN1 1984 aa14.61□□□□□ -0.07
RNF40-208ENST00000565995 ZNF292O60281 2723 aa14.61□□□□□ -0.07
RNF40-208ENST00000565995 C9IYK1 514 aa14.6□□□□□ -0.07
RNF40-208ENST00000565995 MGEA5O60502 916 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms