RNA–Protein interactions for RNA: ENST00000565605.5

CNOT1-207, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-207ENST00000565605 PCDHA11Q9Y5I1 949 aa10.93□□□□□ -0.66
CNOT1-207ENST00000565605 GBF1Q92538 1859 aa10.93□□□□□ -0.66
CNOT1-207ENST00000565605 IGLV3-22A0A075B6J6 115 aa10.92□□□□□ -0.66
CNOT1-207ENST00000565605 ZBBXA8MT70 800 aa10.92□□□□□ -0.66
CNOT1-207ENST00000565605 H3BRB1 525 aa10.92□□□□□ -0.66
CNOT1-207ENST00000565605 M0R2N6 131 aa10.92□□□□□ -0.66
CNOT1-207ENST00000565605 HAS3O00219 553 aa10.92□□□□□ -0.66
CNOT1-207ENST00000565605 ARHGEF15O94989 841 aa10.92□□□□□ -0.66
CNOT1-207ENST00000565605 CYP2C9P11712 490 aa10.92□□□□□ -0.66
CNOT1-207ENST00000565605 ATP2A2P16615 1042 aaKnown RBP10.92□□□□□ -0.66
CNOT1-207ENST00000565605 CIITAP33076 1130 aa10.92□□□□□ -0.66
CNOT1-207ENST00000565605 KRT2P35908 639 aa10.92□□□□□ -0.66
CNOT1-207ENST00000565605 TCF7P36402 384 aaPredicted RBP10.92□□□□□ -0.66
CNOT1-207ENST00000565605 MCM2P49736 904 aa10.92□□□□□ -0.66
CNOT1-207ENST00000565605 USP11P51784 963 aa10.92□□□□□ -0.66
CNOT1-207ENST00000565605 FOSBP53539 338 aa10.92□□□□□ -0.66
CNOT1-207ENST00000565605 HMGN5P82970 282 aaKnown RBP10.92□□□□□ -0.66
CNOT1-207ENST00000565605 NPY5RQ15761 445 aa10.92□□□□□ -0.66
CNOT1-207ENST00000565605 PTGISQ16647 500 aa10.92□□□□□ -0.66
CNOT1-207ENST00000565605 PRR16Q569H4 304 aa10.92□□□□□ -0.66
CNOT1-207ENST00000565605 FAM184AQ8NB25 1140 aa10.92□□□□□ -0.66
CNOT1-207ENST00000565605 SPOCK2Q92563 424 aa10.92□□□□□ -0.66
CNOT1-207ENST00000565605 EPHX3Q9H6B9 360 aa10.92□□□□□ -0.66
CNOT1-207ENST00000565605 TUT1Q9H6E5 874 aaKnown RBP10.92□□□□□ -0.66
CNOT1-207ENST00000565605 HDAC6Q9UBN7 1215 aa10.92□□□□□ -0.66
CNOT1-207ENST00000565605 MTCH2Q9Y6C9 303 aa10.92□□□□□ -0.66
CNOT1-207ENST00000565605 TCF20Q9UGU0 1960 aaKnown RBP10.92□□□□□ -0.66
CNOT1-207ENST00000565605 C17orf102A2RUQ5 167 aa10.91□□□□□ -0.66
CNOT1-207ENST00000565605 RBAK-RBAKDNI3L0D1 243 aa10.91□□□□□ -0.66
CNOT1-207ENST00000565605 DDX39AO00148 427 aaKnown RBP10.91□□□□□ -0.66
CNOT1-207ENST00000565605 IPO5O00410 1097 aaKnown RBP10.91□□□□□ -0.66
CNOT1-207ENST00000565605 CA3P07451 260 aa10.91□□□□□ -0.66
CNOT1-207ENST00000565605 ACTR2P61160 394 aa10.91□□□□□ -0.66
CNOT1-207ENST00000565605 ITGB3BPQ13352 177 aaPredicted RBP10.91□□□□□ -0.66
CNOT1-207ENST00000565605 SKIV2LQ15477 1246 aaKnown RBP10.91□□□□□ -0.66
CNOT1-207ENST00000565605 GDF6Q6KF10 455 aaPredicted RBP10.91□□□□□ -0.66
CNOT1-207ENST00000565605 PIK3AP1Q6ZUJ8 805 aa10.91□□□□□ -0.66
CNOT1-207ENST00000565605 DEFB128Q7Z7B8 93 aa10.91□□□□□ -0.66
CNOT1-207ENST00000565605 TRIM50Q86XT4 487 aa10.91□□□□□ -0.66
CNOT1-207ENST00000565605 RPUSD2Q8IZ73 545 aaKnown RBP10.91□□□□□ -0.66
CNOT1-207ENST00000565605 CCDC155Q8N6L0 562 aa10.91□□□□□ -0.66
CNOT1-207ENST00000565605 GLG1Q92896 1179 aa10.91□□□□□ -0.66
CNOT1-207ENST00000565605 C1QTNF1Q9BXJ1 281 aa10.91□□□□□ -0.66
CNOT1-207ENST00000565605 AZI2Q9H6S1 392 aa10.91□□□□□ -0.66
CNOT1-207ENST00000565605 TBC1D22BQ9NU19 505 aa10.91□□□□□ -0.66
CNOT1-207ENST00000565605 GTF2IRD1Q9UHL9 959 aa10.91□□□□□ -0.66
CNOT1-207ENST00000565605 GSTTP1A0A1W2PQM5 241 aa10.9□□□□□ -0.66
CNOT1-207ENST00000565605 TDP2O95551 362 aa10.9□□□□□ -0.66
CNOT1-207ENST00000565605 MMP1P03956 469 aa10.9□□□□□ -0.66
CNOT1-207ENST00000565605 SMIM10L2AP0DMW4 78 aa10.9□□□□□ -0.66
CNOT1-207ENST00000565605 SMIM10L2BP0DMW5 78 aa10.9□□□□□ -0.66
CNOT1-207ENST00000565605 POU3F3P20264 500 aaPredicted RBP10.9□□□□□ -0.66
CNOT1-207ENST00000565605 PTPN5P54829 565 aa10.9□□□□□ -0.66
CNOT1-207ENST00000565605 BFSP2Q13515 415 aa10.9□□□□□ -0.66
CNOT1-207ENST00000565605 SAFBQ15424 915 aaKnown RBP eCLIP10.9□□□□□ -0.66
CNOT1-207ENST00000565605 INF2Q27J81 1249 aa10.9□□□□□ -0.66
CNOT1-207ENST00000565605 LETM2Q2VYF4 491 aa10.9□□□□□ -0.66
CNOT1-207ENST00000565605 MIS18BP1Q6P0N0 1132 aa10.9□□□□□ -0.66
CNOT1-207ENST00000565605 MOXD1Q6UVY6 613 aa10.9□□□□□ -0.66
CNOT1-207ENST00000565605 SPRED2Q7Z698 418 aa10.9□□□□□ -0.66
CNOT1-207ENST00000565605 NEK8Q86SG6 692 aa10.9□□□□□ -0.66
CNOT1-207ENST00000565605 RETREG2Q8NC44 543 aa10.9□□□□□ -0.66
CNOT1-207ENST00000565605 OXER1Q8TDS5 423 aa10.9□□□□□ -0.66
CNOT1-207ENST00000565605 C8orf76Q96K31 380 aa10.9□□□□□ -0.66
CNOT1-207ENST00000565605 NAP1L4Q99733 375 aaKnown RBP10.9□□□□□ -0.66
CNOT1-207ENST00000565605 LRFN3Q9BTN0 628 aa10.9□□□□□ -0.66
CNOT1-207ENST00000565605 SMARCAD1Q9H4L7 1026 aa10.9□□□□□ -0.66
CNOT1-207ENST00000565605 ERAP1Q9NZ08 941 aa10.9□□□□□ -0.66
CNOT1-207ENST00000565605 TELO2Q9Y4R8 837 aa10.9□□□□□ -0.66
CNOT1-207ENST00000565605 EMSYQ7Z589 1322 aa10.89□□□□□ -0.67
CNOT1-207ENST00000565605 TLL1O43897 1013 aa10.89□□□□□ -0.67
CNOT1-207ENST00000565605 GNAT1P11488 350 aa10.89□□□□□ -0.67
CNOT1-207ENST00000565605 GCFC2P16383 781 aaKnown RBP10.89□□□□□ -0.67
CNOT1-207ENST00000565605 MARK3P27448 753 aa10.89□□□□□ -0.67
CNOT1-207ENST00000565605 KRT76Q01546 638 aa10.89□□□□□ -0.67
CNOT1-207ENST00000565605 PTK7Q13308 1070 aa10.89□□□□□ -0.67
CNOT1-207ENST00000565605 Q4G0T1 1027 aa10.89□□□□□ -0.67
CNOT1-207ENST00000565605 FAM160B1Q5W0V3 765 aa10.89□□□□□ -0.67
CNOT1-207ENST00000565605 DIS3L2Q8IYB7 885 aaKnown RBP10.89□□□□□ -0.67
CNOT1-207ENST00000565605 CAGE1Q8TC20 777 aa10.89□□□□□ -0.67
CNOT1-207ENST00000565605 TNPO1Q92973 898 aaKnown RBP10.89□□□□□ -0.67
CNOT1-207ENST00000565605 LENG9Q96B70 501 aa10.89□□□□□ -0.67
CNOT1-207ENST00000565605 TMX3Q96JJ7 454 aa10.89□□□□□ -0.67
CNOT1-207ENST00000565605 UIMC1Q96RL1 719 aa10.89□□□□□ -0.67
CNOT1-207ENST00000565605 TEKT3Q9BXF9 490 aa10.89□□□□□ -0.67
CNOT1-207ENST00000565605 DDX25Q9UHL0 483 aaKnown RBP10.89□□□□□ -0.67
CNOT1-207ENST00000565605 KIF3AQ9Y496 699 aa10.89□□□□□ -0.67
CNOT1-207ENST00000565605 PRRC2BQ5JSZ5 2229 aaKnown RBP10.89□□□□□ -0.67
CNOT1-207ENST00000565605 SCN10AQ9Y5Y9 1956 aa10.88□□□□□ -0.67
CNOT1-207ENST00000565605 CYP3A7-CYP3A51PA0A087WV96 503 aa10.88□□□□□ -0.67
CNOT1-207ENST00000565605 BTBD18B2RXH4 712 aa10.88□□□□□ -0.67
CNOT1-207ENST00000565605 BACH1O14867 736 aa10.88□□□□□ -0.67
CNOT1-207ENST00000565605 MSH4O15457 936 aa10.88□□□□□ -0.67
CNOT1-207ENST00000565605 DHX15O43143 795 aaKnown RBP10.88□□□□□ -0.67
CNOT1-207ENST00000565605 EDIL3O43854 480 aa10.88□□□□□ -0.67
CNOT1-207ENST00000565605 CCNT1O60563 726 aaKnown RBP10.88□□□□□ -0.67
CNOT1-207ENST00000565605 GAS7O60861 476 aa10.88□□□□□ -0.67
CNOT1-207ENST00000565605 LGR5O75473 907 aa10.88□□□□□ -0.67
CNOT1-207ENST00000565605 ATG7O95352 703 aa10.88□□□□□ -0.67
CNOT1-207ENST00000565605 CCNE2O96020 404 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms