RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 CDV3Q9UKY7 258 aaKnown RBP10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 PADI3Q9ULW8 664 aa10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 DDX19BQ9UMR2 479 aa10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 SUPT16HQ9Y5B9 1047 aaKnown RBP10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 NLRC5Q86WI3 1866 aa10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 SPTBN2O15020 2390 aa10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 MYO10Q9HD67 2058 aa10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 TBKBP1A7MCY6 615 aa10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 HIDE1A8MVS5 230 aa10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 M0QZ92 97 aa10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 DHX16O60231 1041 aaKnown RBP10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 KINO60870 393 aaKnown RBP10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 ADRB1P08588 477 aa10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 LAG3P18627 525 aa10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 IBSPP21815 317 aaPredicted RBP10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 SARSP49591 514 aaKnown RBP10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 HSD17B4P51659 736 aa10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 MRPS6P82932 125 aaKnown RBP10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 PPFIA1Q13136 1202 aa10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 PAK2Q13177 524 aa10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 PGM5Q15124 567 aa10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 NONOQ15233 471 aaKnown RBP eCLIP10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 OTOP3Q7RTS5 596 aa10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 C1orf210Q8IVY1 113 aa10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 MRPL43Q8N983 215 aaKnown RBP10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 SUMF1Q8NBK3 374 aa10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 TMEM87AQ8NBN3 555 aa10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 LINC01599Q8WXQ3 324 aa10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 BCAS3Q9H6U6 928 aa10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 VAT1LQ9HCJ6 419 aa10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 NCDNQ9UBB6 729 aa10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 CDH22Q9UJ99 828 aa10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 DUSP12Q9UNI6 340 aa10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 PCDHA1Q9Y5I3 950 aa10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 CFAP47Q6ZTR5 3102 aa10.49□□□□□ -0.73
VPS9D1-205ENST00000565452 TTC3P53804 2025 aa10.48□□□□□ -0.73
VPS9D1-205ENST00000565452 DCDC2BA2VCK2 349 aa10.48□□□□□ -0.73
VPS9D1-205ENST00000565452 SPATA31C2B4DYI2 1134 aa10.48□□□□□ -0.73
VPS9D1-205ENST00000565452 STAM2O75886 525 aa10.48□□□□□ -0.73
VPS9D1-205ENST00000565452 LMNB2Q03252 620 aa10.48□□□□□ -0.73
VPS9D1-205ENST00000565452 QRICH1Q2TAL8 776 aa10.48□□□□□ -0.73
VPS9D1-205ENST00000565452 RARS2Q5T160 578 aaKnown RBP10.48□□□□□ -0.73
VPS9D1-205ENST00000565452 KIAA1841Q6NSI8 718 aa10.48□□□□□ -0.73
VPS9D1-205ENST00000565452 XRRA1Q6P2D8 792 aa10.48□□□□□ -0.73
VPS9D1-205ENST00000565452 SIRT2Q8IXJ6 389 aa10.48□□□□□ -0.73
VPS9D1-205ENST00000565452 GPKOWQ92917 476 aaPredicted RBP eCLIP10.48□□□□□ -0.73
VPS9D1-205ENST00000565452 AMNQ9BXJ7 453 aa10.48□□□□□ -0.73
VPS9D1-205ENST00000565452 CPVLQ9H3G5 476 aa10.48□□□□□ -0.73
VPS9D1-205ENST00000565452 KCNK12Q9HB15 430 aa10.48□□□□□ -0.73
VPS9D1-205ENST00000565452 SH2B1Q9NRF2 756 aaPredicted RBP10.48□□□□□ -0.73
VPS9D1-205ENST00000565452 DZANK1Q9NVP4 752 aa10.48□□□□□ -0.73
VPS9D1-205ENST00000565452 IGSF9Q9P2J2 1179 aa10.48□□□□□ -0.73
VPS9D1-205ENST00000565452 TUBE1Q9UJT0 475 aa10.48□□□□□ -0.73
VPS9D1-205ENST00000565452 SIT1Q9Y3P8 196 aa10.48□□□□□ -0.73
VPS9D1-205ENST00000565452 HCFC2Q9Y5Z7 792 aa10.48□□□□□ -0.73
VPS9D1-205ENST00000565452 PKD1L2Q7Z442 2459 aa10.48□□□□□ -0.73
VPS9D1-205ENST00000565452 FRYLO94915 3013 aa10.47□□□□□ -0.73
VPS9D1-205ENST00000565452 MBLAC1A4D2B0 266 aaPredicted RBP10.47□□□□□ -0.73
VPS9D1-205ENST00000565452 RRN3P2A6NIE6 340 aa10.47□□□□□ -0.73
VPS9D1-205ENST00000565452 CLASP2O75122 1294 aaKnown RBP10.47□□□□□ -0.73
VPS9D1-205ENST00000565452 WEE2P0C1S8 567 aa10.47□□□□□ -0.73
VPS9D1-205ENST00000565452 ARP10275 920 aa10.47□□□□□ -0.73
VPS9D1-205ENST00000565452 PPM1AP35813 382 aa10.47□□□□□ -0.73
VPS9D1-205ENST00000565452 GHRHRQ02643 423 aa10.47□□□□□ -0.73
VPS9D1-205ENST00000565452 SMC1AQ14683 1233 aaKnown RBP10.47□□□□□ -0.73
VPS9D1-205ENST00000565452 ACAP1Q15027 740 aa10.47□□□□□ -0.73
VPS9D1-205ENST00000565452 ALX1Q15699 326 aa10.47□□□□□ -0.73
VPS9D1-205ENST00000565452 GRIK4Q16099 956 aa10.47□□□□□ -0.73
VPS9D1-205ENST00000565452 ZMYM1Q5SVZ6 1142 aa10.47□□□□□ -0.73
VPS9D1-205ENST00000565452 ODR4Q5SWX8 454 aa10.47□□□□□ -0.73
VPS9D1-205ENST00000565452 FAM102BQ5T8I3 360 aa10.47□□□□□ -0.73
VPS9D1-205ENST00000565452 TRIM50Q86XT4 487 aa10.47□□□□□ -0.73
VPS9D1-205ENST00000565452 NME8Q8N427 588 aa10.47□□□□□ -0.73
VPS9D1-205ENST00000565452 GIMAP8Q8ND71 665 aaPredicted RBP10.47□□□□□ -0.73
VPS9D1-205ENST00000565452 TNPO1Q92973 898 aaKnown RBP10.47□□□□□ -0.73
VPS9D1-205ENST00000565452 COL26A1Q96A83 441 aa10.47□□□□□ -0.73
VPS9D1-205ENST00000565452 ZFP91Q96JP5 570 aaPredicted RBP10.47□□□□□ -0.73
VPS9D1-205ENST00000565452 ATP6V0A4Q9HBG4 840 aa10.47□□□□□ -0.73
VPS9D1-205ENST00000565452 C1orf112Q9NSG2 853 aa10.47□□□□□ -0.73
VPS9D1-205ENST00000565452 OTOGLQ3ZCN5 2332 aa10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 DENND3A2RUS2 1198 aa10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 C2orf71A6NGG8 1288 aa10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 CXCL14O95715 111 aa10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 DMWDQ09019 674 aa10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 NFX1Q12986 1120 aaKnown RBP10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 TRAF1Q13077 416 aa10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 COL9A3Q14050 684 aaPredicted RBP10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 ASPRV1Q53RT3 343 aa10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 CCDC178Q5BJE1 867 aa10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 SPECC1Q5M775 1068 aa10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 PHLDB3Q6NSJ2 640 aa10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 SLC24A5Q71RS6 500 aa10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 DGKHQ86XP1 1220 aa10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 C12orf76Q8N812 135 aaPredicted RBP10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 PANK1Q8TE04 598 aa10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 ZNF558Q96NG5 402 aa10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 SENP7Q9BQF6 1050 aa10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 CELF4Q9BZC1 486 aaKnown RBP10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 FAM49AQ9H0Q0 323 aaPredicted RBP10.46□□□□□ -0.73
VPS9D1-205ENST00000565452 CWH43Q9H720 699 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms