RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 LMCD1Q9NZU5 365 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 VPS54Q9P1Q0 977 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 SEL1LQ9UBV2 794 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 FPGT-TNNI3KV9GXZ4 949 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 DDX39AO00148 427 aaKnown RBP5.44□□□□□ -1.54
SMG1-211ENST00000565324 MAP3K13O43283 966 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 PRPSAP2O60256 369 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 DTNBO60941 627 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 PGM1P36871 562 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 NT5C2P49902 561 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 ARMCX5Q6P1M9 558 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 METTL13Q8N6R0 699 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 ECT2Q9H8V3 914 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 RSRC2Q7L4I2 434 aaKnown RBP5.44□□□□□ -1.54
SMG1-211ENST00000565324 BLZF1Q9H2G9 400 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 NHEJ1Q9H9Q4 299 aaPredicted RBP5.44□□□□□ -1.54
SMG1-211ENST00000565324 ADA2Q9NZK5 511 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 SELENONQ9NZV5 590 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 STRNO43815 780 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 FOSP01100 380 aaPredicted RBP5.44□□□□□ -1.54
SMG1-211ENST00000565324 SOX5P35711 763 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 CATSPER3Q86XQ3 398 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 PROM2Q8N271 834 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 LARP4BQ92615 738 aaKnown RBP5.44□□□□□ -1.54
SMG1-211ENST00000565324 ETNK1Q9HBU6 452 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 SYTL2Q9HCH5 934 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 TNNQ9UQP3 1299 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 CTIFO43310 598 aaKnown RBP5.44□□□□□ -1.54
SMG1-211ENST00000565324 APOA4P06727 396 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 PPARDQ03181 441 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 CSTF3Q12996 717 aaKnown RBP5.44□□□□□ -1.54
SMG1-211ENST00000565324 SURF1Q15526 300 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 METTL22Q9BUU2 404 aaPredicted RBP5.44□□□□□ -1.54
SMG1-211ENST00000565324 TEKT3Q9BXF9 490 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 ZMYND8Q9ULU4 1186 aaPredicted RBP5.44□□□□□ -1.54
SMG1-211ENST00000565324 LRRIQ3A6PVS8 624 aaPredicted RBP5.44□□□□□ -1.54
SMG1-211ENST00000565324 DNAJC6O75061 913 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 INAQ16352 499 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 TAGAPQ8N103 731 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 RAPGEF5Q92565 580 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 DCAF5Q96JK2 942 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 ZSCAN10Q96SZ4 725 aaPredicted RBP5.44□□□□□ -1.54
SMG1-211ENST00000565324 SNX25Q9H3E2 840 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 RUBCNLQ9H714 662 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 GPBP1L1Q9HC44 474 aaPredicted RBP5.44□□□□□ -1.54
SMG1-211ENST00000565324 PLAAQ9Y263 795 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 HNRNPDLO14979 420 aaKnown RBP5.44□□□□□ -1.54
SMG1-211ENST00000565324 SNX2O60749 519 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 SEC31AO94979 1220 aaKnown RBP5.44□□□□□ -1.54
SMG1-211ENST00000565324 NDUFA8P51970 172 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 SLC39A14Q15043 492 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 HIF1AQ16665 826 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 DNAL1Q4LDG9 190 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 ANGPTL8Q6UXH0 198 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 TESK2Q96S53 571 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 KLHL31Q9H511 634 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 PCDH11XQ9BZA7 1347 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 PCDH11YQ9BZA8 1340 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 WDR64B1ANS9 1081 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 CCND1P24385 295 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 RBL2Q08999 1139 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 FBXO38Q6PIJ6 1188 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 ELMSAN1Q6PJG2 1045 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 VSTM4Q8IW00 320 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 NDEL1Q9GZM8 345 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 PLEKHA4Q9H4M7 779 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 TMEM206Q9H813 350 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 NFU1Q9UMS0 254 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 SMG5Q9UPR3 1016 aaKnown RBP5.44□□□□□ -1.54
SMG1-211ENST00000565324 URB2Q14146 1524 aaKnown RBP5.44□□□□□ -1.54
SMG1-211ENST00000565324 NBNO60934 754 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 CLK1P49759 484 aaKnown RBP5.44□□□□□ -1.54
SMG1-211ENST00000565324 DMC1Q14565 340 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 ODR4Q5SWX8 454 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 TBC1D9BQ66K14 1250 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 ATP11CQ8NB49 1132 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 RDH13Q8NBN7 331 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 PLBD2Q8NHP8 589 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 GOLPH3LQ9H4A5 285 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 BIN2Q9UBW5 565 aaPredicted RBP5.44□□□□□ -1.54
SMG1-211ENST00000565324 KDM5BQ9UGL1 1544 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 ELF1P32519 619 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 NUP62P37198 522 aaPredicted RBP5.44□□□□□ -1.54
SMG1-211ENST00000565324 HSPA9P38646 679 aaKnown RBP5.44□□□□□ -1.54
SMG1-211ENST00000565324 ZNF658Q5TYW1 1059 aaPredicted RBP5.44□□□□□ -1.54
SMG1-211ENST00000565324 ARHGEF16Q5VV41 709 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 PARD3BQ8TEW8 1205 aa5.44□□□□□ -1.54
SMG1-211ENST00000565324 MOV10L1Q9BXT6 1211 aaKnown RBP5.44□□□□□ -1.54
SMG1-211ENST00000565324 E7EWF7 191 aa5.43□□□□□ -1.54
SMG1-211ENST00000565324 H7C0S8 307 aa5.43□□□□□ -1.54
SMG1-211ENST00000565324 SLCO1A2P46721 670 aa5.43□□□□□ -1.54
SMG1-211ENST00000565324 PURAQ00577 322 aaKnown RBP5.43□□□□□ -1.54
SMG1-211ENST00000565324 CCDC103Q8IW40 242 aa5.43□□□□□ -1.54
SMG1-211ENST00000565324 TTC8Q8TAM2 541 aa5.43□□□□□ -1.54
SMG1-211ENST00000565324 NLRP4Q96MN2 994 aa5.43□□□□□ -1.54
SMG1-211ENST00000565324 ACCSQ96QU6 501 aa5.43□□□□□ -1.54
SMG1-211ENST00000565324 WWP1Q9H0M0 922 aa5.43□□□□□ -1.54
SMG1-211ENST00000565324 RTCBQ9Y3I0 505 aaKnown RBP5.43□□□□□ -1.54
SMG1-211ENST00000565324 BLMP54132 1417 aaPredicted RBP5.43□□□□□ -1.54
SMG1-211ENST00000565324 YTHDC2Q9H6S0 1430 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms