RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 INCENPQ9NQS7 918 aa6.08□□□□□ -1.44
PALB2-203ENST00000565038 KCND1Q9NSA2 647 aa6.08□□□□□ -1.44
PALB2-203ENST00000565038 USP40Q9NVE5 1235 aa6.08□□□□□ -1.44
PALB2-203ENST00000565038 H2AFY2Q9P0M6 372 aaPredicted RBP6.08□□□□□ -1.44
PALB2-203ENST00000565038 ZKSCAN5Q9Y2L8 839 aa6.08□□□□□ -1.44
PALB2-203ENST00000565038 GSG1L2A8MUP6 293 aa6.07□□□□□ -1.44
PALB2-203ENST00000565038 H7C1D1 291 aa6.07□□□□□ -1.44
PALB2-203ENST00000565038 NOBOXO60393 691 aa6.07□□□□□ -1.44
PALB2-203ENST00000565038 PDE8AO60658 829 aa6.07□□□□□ -1.44
PALB2-203ENST00000565038 MPIG6BO95866 241 aa6.07□□□□□ -1.44
PALB2-203ENST00000565038 KNG1P01042 644 aa6.07□□□□□ -1.44
PALB2-203ENST00000565038 ATP2A2P16615 1042 aaKnown RBP6.07□□□□□ -1.44
PALB2-203ENST00000565038 SLC9A1P19634 815 aa6.07□□□□□ -1.44
PALB2-203ENST00000565038 POU3F2P20265 443 aaPredicted RBP6.07□□□□□ -1.44
PALB2-203ENST00000565038 SDHAP31040 664 aa6.07□□□□□ -1.44
PALB2-203ENST00000565038 GJA9P57773 515 aa6.07□□□□□ -1.44
PALB2-203ENST00000565038 CC2D1AQ6P1N0 951 aaPredicted RBP6.07□□□□□ -1.44
PALB2-203ENST00000565038 PPM1KQ8N3J5 372 aa6.07□□□□□ -1.44
PALB2-203ENST00000565038 KIAA1958Q8N8K9 716 aa6.07□□□□□ -1.44
PALB2-203ENST00000565038 NUDT10Q8NFP7 164 aa6.07□□□□□ -1.44
PALB2-203ENST00000565038 LEO1Q8WVC0 666 aaPredicted RBP6.07□□□□□ -1.44
PALB2-203ENST00000565038 NUDT11Q96G61 164 aa6.07□□□□□ -1.44
PALB2-203ENST00000565038 YTHDC1Q96MU7 727 aaKnown RBP6.07□□□□□ -1.44
PALB2-203ENST00000565038 AMNQ9BXJ7 453 aa6.07□□□□□ -1.44
PALB2-203ENST00000565038 TMEM168Q9H0V1 697 aa6.07□□□□□ -1.44
PALB2-203ENST00000565038 XYLT2Q9H1B5 865 aa6.07□□□□□ -1.44
PALB2-203ENST00000565038 PCIF1Q9H4Z3 704 aa6.07□□□□□ -1.44
PALB2-203ENST00000565038 IFT57Q9NWB7 429 aa6.07□□□□□ -1.44
PALB2-203ENST00000565038 OXSMQ9NWU1 459 aa6.07□□□□□ -1.44
PALB2-203ENST00000565038 FTSJ1Q9UET6 329 aa6.07□□□□□ -1.44
PALB2-203ENST00000565038 GAS7O60861 476 aa6.06□□□□□ -1.44
PALB2-203ENST00000565038 F2P00734 622 aa6.06□□□□□ -1.44
PALB2-203ENST00000565038 HOXA5P20719 270 aa6.06□□□□□ -1.44
PALB2-203ENST00000565038 PTX3P26022 381 aaPredicted RBP6.06□□□□□ -1.44
PALB2-203ENST00000565038 ZNF174Q15697 407 aa6.06□□□□□ -1.44
PALB2-203ENST00000565038 TAF7LQ5H9L4 462 aa6.06□□□□□ -1.44
PALB2-203ENST00000565038 FAM26FQ5R3K3 315 aa6.06□□□□□ -1.44
PALB2-203ENST00000565038 CREB3L3Q68CJ9 461 aa6.06□□□□□ -1.44
PALB2-203ENST00000565038 AHI1Q8N157 1196 aa6.06□□□□□ -1.44
PALB2-203ENST00000565038 UBR7Q8N806 425 aa6.06□□□□□ -1.44
PALB2-203ENST00000565038 CHTF18Q8WVB6 975 aa6.06□□□□□ -1.44
PALB2-203ENST00000565038 ELF4Q99607 663 aaPredicted RBP6.06□□□□□ -1.44
PALB2-203ENST00000565038 ORAI3Q9BRQ5 295 aa6.06□□□□□ -1.44
PALB2-203ENST00000565038 ADAM7Q9H2U9 754 aa6.06□□□□□ -1.44
PALB2-203ENST00000565038 THG1LQ9NWX6 298 aaKnown RBP6.06□□□□□ -1.44
PALB2-203ENST00000565038 GALNT8Q9NY28 637 aa6.06□□□□□ -1.44
PALB2-203ENST00000565038 MROH6A6NGR9 719 aa6.05□□□□□ -1.44
PALB2-203ENST00000565038 GOLGA6L22H0YM25 854 aa6.05□□□□□ -1.44
PALB2-203ENST00000565038 KLHL18O94889 574 aa6.05□□□□□ -1.44
PALB2-203ENST00000565038 ADCY8P40145 1251 aa6.05□□□□□ -1.44
PALB2-203ENST00000565038 ECE1P42892 770 aa6.05□□□□□ -1.44
PALB2-203ENST00000565038 SCNN1BP51168 640 aa6.05□□□□□ -1.44
PALB2-203ENST00000565038 IL13RA1P78552 427 aa6.05□□□□□ -1.44
PALB2-203ENST00000565038 DSG1Q02413 1049 aa6.05□□□□□ -1.44
PALB2-203ENST00000565038 TTLL10Q6ZVT0 673 aa6.05□□□□□ -1.44
PALB2-203ENST00000565038 KIF18BQ86Y91 864 aa6.05□□□□□ -1.44
PALB2-203ENST00000565038 FOXRED1Q96CU9 486 aaPredicted RBP6.05□□□□□ -1.44
PALB2-203ENST00000565038 GPR101Q96P66 508 aaPredicted RBP6.05□□□□□ -1.44
PALB2-203ENST00000565038 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.05□□□□□ -1.44
PALB2-203ENST00000565038 ZDHHC9Q9Y397 364 aa6.05□□□□□ -1.44
PALB2-203ENST00000565038 ASB1Q9Y576 335 aa6.05□□□□□ -1.44
PALB2-203ENST00000565038 ADAMTS20P59510 1910 aa6.04□□□□□ -1.44
PALB2-203ENST00000565038 A0A0G2JLL6 359 aaPredicted RBP6.04□□□□□ -1.44
PALB2-203ENST00000565038 H0Y858 1186 aa6.04□□□□□ -1.44
PALB2-203ENST00000565038 CLSTN1O94985 981 aa6.04□□□□□ -1.44
PALB2-203ENST00000565038 WDR72Q3MJ13 1102 aa6.04□□□□□ -1.44
PALB2-203ENST00000565038 EGFLAMQ63HQ2 1017 aa6.04□□□□□ -1.44
PALB2-203ENST00000565038 DPP8Q6V1X1 898 aaPredicted RBP6.04□□□□□ -1.44
PALB2-203ENST00000565038 FERMT3Q86UX7 667 aa6.04□□□□□ -1.44
PALB2-203ENST00000565038 THNSL2Q86YJ6 484 aa6.04□□□□□ -1.44
PALB2-203ENST00000565038 LCORQ96JN0 433 aaPredicted RBP6.04□□□□□ -1.44
PALB2-203ENST00000565038 ACSS2Q9NR19 701 aa6.04□□□□□ -1.44
PALB2-203ENST00000565038 TOMM22Q9NS69 142 aa6.04□□□□□ -1.44
PALB2-203ENST00000565038 DUSP10Q9Y6W6 482 aa6.04□□□□□ -1.44
PALB2-203ENST00000565038 CHGBP05060 677 aa6.03□□□□□ -1.44
PALB2-203ENST00000565038 CYP17A1P05093 508 aa6.03□□□□□ -1.44
PALB2-203ENST00000565038 MASP1P48740 699 aa6.03□□□□□ -1.44
PALB2-203ENST00000565038 NFATC3Q12968 1075 aa6.03□□□□□ -1.44
PALB2-203ENST00000565038 SART3Q15020 963 aaKnown RBP6.03□□□□□ -1.44
PALB2-203ENST00000565038 RTN4RL1Q86UN2 441 aaPredicted RBP6.03□□□□□ -1.44
PALB2-203ENST00000565038 SMC1BQ8NDV3 1235 aa6.03□□□□□ -1.44
PALB2-203ENST00000565038 OR2W6PQ8NHA6 318 aa6.03□□□□□ -1.44
PALB2-203ENST00000565038 WDR48Q8TAF3 677 aa6.03□□□□□ -1.44
PALB2-203ENST00000565038 MBD6Q96DN6 1003 aa6.03□□□□□ -1.44
PALB2-203ENST00000565038 C20orf173Q96LM9 149 aa6.03□□□□□ -1.44
PALB2-203ENST00000565038 BTBD2Q9BX70 525 aa6.03□□□□□ -1.44
PALB2-203ENST00000565038 KRTAP9-9Q9BYP9 154 aa6.03□□□□□ -1.44
PALB2-203ENST00000565038 KRTAP9-4Q9BYQ2 154 aa6.03□□□□□ -1.44
PALB2-203ENST00000565038 BARX1Q9HBU1 254 aaPredicted RBP6.03□□□□□ -1.44
PALB2-203ENST00000565038 MAPRE3Q9UPY8 281 aa6.03□□□□□ -1.44
PALB2-203ENST00000565038 SPO11Q9Y5K1 396 aa6.03□□□□□ -1.44
PALB2-203ENST00000565038 CNR2P34972 360 aa6.02□□□□□ -1.45
PALB2-203ENST00000565038 FNTBP49356 437 aa6.02□□□□□ -1.45
PALB2-203ENST00000565038 KPNA1P52294 538 aaPredicted RBP6.02□□□□□ -1.45
PALB2-203ENST00000565038 IL2P60568 153 aa6.02□□□□□ -1.45
PALB2-203ENST00000565038 CD83Q01151 205 aa6.02□□□□□ -1.45
PALB2-203ENST00000565038 SLC6A3Q01959 620 aa6.02□□□□□ -1.45
PALB2-203ENST00000565038 KIAA2012Q0VF49 1180 aa6.02□□□□□ -1.45
PALB2-203ENST00000565038 ESRP1Q6NXG1 681 aaKnown RBP6.02□□□□□ -1.45
PALB2-203ENST00000565038 Q6ZUG5 572 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms