RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 BACH1O14867 736 aa11.39□□□□□ -0.59
CMTM3-209ENST00000565003 UPP2O95045 317 aa11.39□□□□□ -0.59
CMTM3-209ENST00000565003 ATP4AP20648 1035 aa11.39□□□□□ -0.59
CMTM3-209ENST00000565003 CIITAP33076 1130 aa11.39□□□□□ -0.59
CMTM3-209ENST00000565003 SLC26A2P50443 739 aa11.39□□□□□ -0.59
CMTM3-209ENST00000565003 NLRP5P59047 1200 aa11.39□□□□□ -0.59
CMTM3-209ENST00000565003 TMEM62Q0P6H9 643 aa11.39□□□□□ -0.59
CMTM3-209ENST00000565003 STK3Q13188 491 aa11.39□□□□□ -0.59
CMTM3-209ENST00000565003 FAM160B1Q5W0V3 765 aa11.39□□□□□ -0.59
CMTM3-209ENST00000565003 MTHFD1LQ6UB35 978 aa11.39□□□□□ -0.59
CMTM3-209ENST00000565003 TRIM22Q8IYM9 498 aa11.39□□□□□ -0.59
CMTM3-209ENST00000565003 BICD2Q8TD16 824 aa11.39□□□□□ -0.59
CMTM3-209ENST00000565003 ATP8B4Q8TF62 1192 aa11.39□□□□□ -0.59
CMTM3-209ENST00000565003 ZNF274Q96GC6 653 aaPredicted RBP11.39□□□□□ -0.59
CMTM3-209ENST00000565003 AIFM3Q96NN9 605 aa11.39□□□□□ -0.59
CMTM3-209ENST00000565003 YME1L1Q96TA2 773 aa11.39□□□□□ -0.59
CMTM3-209ENST00000565003 C17orf80Q9BSJ5 609 aa11.39□□□□□ -0.59
CMTM3-209ENST00000565003 ZNF302Q9NR11 478 aa11.39□□□□□ -0.59
CMTM3-209ENST00000565003 SH3GLB2Q9NR46 395 aa11.39□□□□□ -0.59
CMTM3-209ENST00000565003 PCDHA2Q9Y5H9 948 aa11.39□□□□□ -0.59
CMTM3-209ENST00000565003 COL4A6Q14031 1691 aa11.39□□□□□ -0.59
CMTM3-209ENST00000565003 ZBTB42B2RXF5 422 aa11.38□□□□□ -0.59
CMTM3-209ENST00000565003 HBP1O60381 514 aa11.38□□□□□ -0.59
CMTM3-209ENST00000565003 CD52P31358 61 aa11.38□□□□□ -0.59
CMTM3-209ENST00000565003 MRPS5P82675 430 aaKnown RBP11.38□□□□□ -0.59
CMTM3-209ENST00000565003 TFF2Q03403 129 aa11.38□□□□□ -0.59
CMTM3-209ENST00000565003 SSRP1Q08945 709 aaKnown RBP11.38□□□□□ -0.59
CMTM3-209ENST00000565003 SKIV2LQ15477 1246 aaKnown RBP11.38□□□□□ -0.59
CMTM3-209ENST00000565003 NPY5RQ15761 445 aa11.38□□□□□ -0.59
CMTM3-209ENST00000565003 ZNF746Q6NUN9 644 aaPredicted RBP11.38□□□□□ -0.59
CMTM3-209ENST00000565003 SWSAP1Q6NVH7 229 aa11.38□□□□□ -0.59
CMTM3-209ENST00000565003 MIS18BP1Q6P0N0 1132 aa11.38□□□□□ -0.59
CMTM3-209ENST00000565003 PDXDC2PQ6P474 469 aa11.38□□□□□ -0.59
CMTM3-209ENST00000565003 TSHZ1Q6ZSZ6 1077 aa11.38□□□□□ -0.59
CMTM3-209ENST00000565003 LINC01599Q8WXQ3 324 aa11.38□□□□□ -0.59
CMTM3-209ENST00000565003 SYMPKQ92797 1274 aaKnown RBP11.38□□□□□ -0.59
CMTM3-209ENST00000565003 TNPO1Q92973 898 aaKnown RBP11.38□□□□□ -0.59
CMTM3-209ENST00000565003 TBC1D22BQ9NU19 505 aa11.38□□□□□ -0.59
CMTM3-209ENST00000565003 TRPV2Q9Y5S1 764 aa11.38□□□□□ -0.59
CMTM3-209ENST00000565003 TRANK1O15050 2925 aa11.38□□□□□ -0.59
CMTM3-209ENST00000565003 IGSF9BQ9UPX0 1349 aa11.37□□□□□ -0.59
CMTM3-209ENST00000565003 SMIM35A0A1B0GVV1 85 aa11.37□□□□□ -0.59
CMTM3-209ENST00000565003 M0R2N6 131 aa11.37□□□□□ -0.59
CMTM3-209ENST00000565003 DTNBO60941 627 aa11.37□□□□□ -0.59
CMTM3-209ENST00000565003 DEXIO95424 95 aa11.37□□□□□ -0.59
CMTM3-209ENST00000565003 RPLP2P05387 115 aaKnown RBP11.37□□□□□ -0.59
CMTM3-209ENST00000565003 KLRC1P26715 233 aa11.37□□□□□ -0.59
CMTM3-209ENST00000565003 KRT76Q01546 638 aa11.37□□□□□ -0.59
CMTM3-209ENST00000565003 SCRN1Q12765 414 aa11.37□□□□□ -0.59
CMTM3-209ENST00000565003 IER5Q5VY09 327 aa11.37□□□□□ -0.59
CMTM3-209ENST00000565003 TRMT1LQ7Z2T5 733 aaKnown RBP11.37□□□□□ -0.59
CMTM3-209ENST00000565003 SMAP1Q8IYB5 467 aaPredicted RBP11.37□□□□□ -0.59
CMTM3-209ENST00000565003 FBXO22Q8NEZ5 403 aa11.37□□□□□ -0.59
CMTM3-209ENST00000565003 TBCKQ8TEA7 893 aa11.37□□□□□ -0.59
CMTM3-209ENST00000565003 GJA10Q969M2 543 aa11.37□□□□□ -0.59
CMTM3-209ENST00000565003 TSPYL2Q9H2G4 693 aaPredicted RBP11.37□□□□□ -0.59
CMTM3-209ENST00000565003 RC3H2Q9HBD1 1191 aaKnown RBP11.37□□□□□ -0.59
CMTM3-209ENST00000565003 LMCD1Q9NZU5 365 aa11.37□□□□□ -0.59
CMTM3-209ENST00000565003 PCDHA4Q9UN74 947 aa11.37□□□□□ -0.59
CMTM3-209ENST00000565003 MAFBQ9Y5Q3 323 aaPredicted RBP11.37□□□□□ -0.59
CMTM3-209ENST00000565003 COL1A2P08123 1366 aa11.37□□□□□ -0.59
CMTM3-209ENST00000565003 TTC3P53804 2025 aa11.36□□□□□ -0.59
CMTM3-209ENST00000565003 KDM3AQ9Y4C1 1321 aa11.36□□□□□ -0.59
CMTM3-209ENST00000565003 REV3LO60673 3130 aa11.36□□□□□ -0.59
CMTM3-209ENST00000565003 M0QZ92 97 aa11.36□□□□□ -0.59
CMTM3-209ENST00000565003 ENPP3O14638 875 aa11.36□□□□□ -0.59
CMTM3-209ENST00000565003 MSH4O15457 936 aa11.36□□□□□ -0.59
CMTM3-209ENST00000565003 TDP2O95551 362 aa11.36□□□□□ -0.59
CMTM3-209ENST00000565003 C22orf31O95567 290 aa11.36□□□□□ -0.59
CMTM3-209ENST00000565003 USP11P51784 963 aa11.36□□□□□ -0.59
CMTM3-209ENST00000565003 KCNQ1P51787 676 aa11.36□□□□□ -0.59
CMTM3-209ENST00000565003 EPC2Q52LR7 807 aa11.36□□□□□ -0.59
CMTM3-209ENST00000565003 ERICH6BQ5W0A0 696 aa11.36□□□□□ -0.59
CMTM3-209ENST00000565003 RTN4RL1Q86UN2 441 aaPredicted RBP11.36□□□□□ -0.59
CMTM3-209ENST00000565003 CKAP2LQ8IYA6 745 aa11.36□□□□□ -0.59
CMTM3-209ENST00000565003 KIAA0319LQ8IZA0 1049 aa11.36□□□□□ -0.59
CMTM3-209ENST00000565003 BLIDQ8IZY5 108 aa11.36□□□□□ -0.59
CMTM3-209ENST00000565003 DAGLBQ8NCG7 672 aa11.36□□□□□ -0.59
CMTM3-209ENST00000565003 ADAMTS19Q8TE59 1207 aa11.36□□□□□ -0.59
CMTM3-209ENST00000565003 TMEM40Q8WWA1 233 aa11.36□□□□□ -0.59
CMTM3-209ENST00000565003 CELF4Q9BZC1 486 aaKnown RBP11.36□□□□□ -0.59
CMTM3-209ENST00000565003 GABBR1Q9UBS5 961 aa11.36□□□□□ -0.59
CMTM3-209ENST00000565003 TPCN1Q9ULQ1 816 aa11.36□□□□□ -0.59
CMTM3-209ENST00000565003 PCDHA10Q9Y5I2 948 aa11.36□□□□□ -0.59
CMTM3-209ENST00000565003 LOXHD1Q8IVV2 1947 aa11.36□□□□□ -0.59
CMTM3-209ENST00000565003 BRWD1Q9NSI6 2320 aa11.35□□□□□ -0.59
CMTM3-209ENST00000565003 WDR64B1ANS9 1081 aa11.35□□□□□ -0.59
CMTM3-209ENST00000565003 ZNF862O60290 1169 aa11.35□□□□□ -0.59
CMTM3-209ENST00000565003 GAS7O60861 476 aa11.35□□□□□ -0.59
CMTM3-209ENST00000565003 PSAPP07602 524 aa11.35□□□□□ -0.59
CMTM3-209ENST00000565003 LINC00271P0C7V0 271 aa11.35□□□□□ -0.59
CMTM3-209ENST00000565003 PAK2Q13177 524 aa11.35□□□□□ -0.59
CMTM3-209ENST00000565003 UGCGQ16739 394 aa11.35□□□□□ -0.59
CMTM3-209ENST00000565003 TMEM266Q2M3C6 531 aa11.35□□□□□ -0.59
CMTM3-209ENST00000565003 ZNF484Q5JVG2 852 aa11.35□□□□□ -0.59
CMTM3-209ENST00000565003 CPLX2Q6PUV4 134 aaKnown RBP11.35□□□□□ -0.59
CMTM3-209ENST00000565003 NME8Q8N427 588 aa11.35□□□□□ -0.59
CMTM3-209ENST00000565003 BBXQ8WY36 941 aaPredicted RBP11.35□□□□□ -0.59
CMTM3-209ENST00000565003 SLC5A5Q92911 643 aa11.35□□□□□ -0.59
CMTM3-209ENST00000565003 IL17RAQ96F46 866 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms