RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 TAPT1Q6NXT6 567 aa12.4□□□□□ -0.42
SF3B3-205ENST00000564899 KANK3Q6NY19 840 aa12.4□□□□□ -0.42
SF3B3-205ENST00000564899 PDXDC2PQ6P474 469 aa12.4□□□□□ -0.42
SF3B3-205ENST00000564899 CYFIP1Q7L576 1253 aa12.4□□□□□ -0.42
SF3B3-205ENST00000564899 CATSPER3Q86XQ3 398 aa12.4□□□□□ -0.42
SF3B3-205ENST00000564899 RDM1Q8NG50 284 aa12.4□□□□□ -0.42
SF3B3-205ENST00000564899 DYDC2Q96IM9 177 aa12.4□□□□□ -0.42
SF3B3-205ENST00000564899 POLR3CQ9BUI4 534 aaPredicted RBP12.4□□□□□ -0.42
SF3B3-205ENST00000564899 KATNBL1Q9H079 304 aa12.4□□□□□ -0.42
SF3B3-205ENST00000564899 ABHD16BQ9H3Z7 469 aa12.4□□□□□ -0.42
SF3B3-205ENST00000564899 CUEDC2Q9H467 287 aa12.4□□□□□ -0.42
SF3B3-205ENST00000564899 MAGEF1Q9HAY2 307 aa12.4□□□□□ -0.42
SF3B3-205ENST00000564899 TUFT1Q9NNX1 390 aa12.4□□□□□ -0.42
SF3B3-205ENST00000564899 PRDM5Q9NQX1 630 aaPredicted RBP12.4□□□□□ -0.42
SF3B3-205ENST00000564899 PDLIM7Q9NR12 457 aa12.4□□□□□ -0.42
SF3B3-205ENST00000564899 PDGFCQ9NRA1 345 aa12.4□□□□□ -0.42
SF3B3-205ENST00000564899 RGL1Q9NZL6 768 aa12.4□□□□□ -0.42
SF3B3-205ENST00000564899 STK17AQ9UEE5 414 aa12.4□□□□□ -0.42
SF3B3-205ENST00000564899 HOOK1Q9UJC3 728 aaKnown RBP12.4□□□□□ -0.42
SF3B3-205ENST00000564899 DDX41Q9UJV9 622 aaKnown RBP12.4□□□□□ -0.42
SF3B3-205ENST00000564899 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.39□□□□□ -0.43
SF3B3-205ENST00000564899 RBM47A0AV96 593 aaKnown RBP12.39□□□□□ -0.43
SF3B3-205ENST00000564899 SYCE3A1L190 88 aa12.39□□□□□ -0.43
SF3B3-205ENST00000564899 SPATA31C1P0DKV0 1188 aa12.39□□□□□ -0.43
SF3B3-205ENST00000564899 CYBAP13498 195 aa12.39□□□□□ -0.43
SF3B3-205ENST00000564899 CNGA1P29973 690 aa12.39□□□□□ -0.43
SF3B3-205ENST00000564899 ACTR2P61160 394 aa12.39□□□□□ -0.43
SF3B3-205ENST00000564899 ACVR2BQ13705 512 aa12.39□□□□□ -0.43
SF3B3-205ENST00000564899 CTTNQ14247 550 aaKnown RBP12.39□□□□□ -0.43
SF3B3-205ENST00000564899 POSTNQ15063 836 aa12.39□□□□□ -0.43
SF3B3-205ENST00000564899 ECM1Q16610 540 aa12.39□□□□□ -0.43
SF3B3-205ENST00000564899 CCDC62Q6P9F0 684 aa12.39□□□□□ -0.43
SF3B3-205ENST00000564899 POTEGQ6S5H5 508 aa12.39□□□□□ -0.43
SF3B3-205ENST00000564899 METTL7BQ6UX53 244 aa12.39□□□□□ -0.43
SF3B3-205ENST00000564899 CKAP2LQ8IYA6 745 aa12.39□□□□□ -0.43
SF3B3-205ENST00000564899 SMAP1Q8IYB5 467 aaPredicted RBP12.39□□□□□ -0.43
SF3B3-205ENST00000564899 ELOA2Q8IYF1 753 aaPredicted RBP12.39□□□□□ -0.43
SF3B3-205ENST00000564899 GRAMD1CQ8IYS0 662 aa12.39□□□□□ -0.43
SF3B3-205ENST00000564899 LRRC15Q8TF66 581 aa12.39□□□□□ -0.43
SF3B3-205ENST00000564899 PAGE5Q96GU1 130 aa12.39□□□□□ -0.43
SF3B3-205ENST00000564899 HSD17B14Q9BPX1 270 aa12.39□□□□□ -0.43
SF3B3-205ENST00000564899 LXNQ9BS40 222 aa12.39□□□□□ -0.43
SF3B3-205ENST00000564899 BCAS3Q9H6U6 928 aa12.39□□□□□ -0.43
SF3B3-205ENST00000564899 MLXIPQ9HAP2 919 aa12.39□□□□□ -0.43
SF3B3-205ENST00000564899 KIAA1024Q9UPX6 916 aa12.39□□□□□ -0.43
SF3B3-205ENST00000564899 PCDHA10Q9Y5I2 948 aa12.39□□□□□ -0.43
SF3B3-205ENST00000564899 PLXNA1Q9UIW2 1896 aa12.38□□□□□ -0.43
SF3B3-205ENST00000564899 NCOR1O75376 2440 aa12.38□□□□□ -0.43
SF3B3-205ENST00000564899 DNM1LO00429 736 aa12.38□□□□□ -0.43
SF3B3-205ENST00000564899 SLITRK3O94933 977 aa12.38□□□□□ -0.43
SF3B3-205ENST00000564899 P4HBP07237 508 aaKnown RBP12.38□□□□□ -0.43
SF3B3-205ENST00000564899 PSAPP07602 524 aa12.38□□□□□ -0.43
SF3B3-205ENST00000564899 FOSL2P15408 326 aa12.38□□□□□ -0.43
SF3B3-205ENST00000564899 COL9A1P20849 921 aa12.38□□□□□ -0.43
SF3B3-205ENST00000564899 MUTP22033 750 aa12.38□□□□□ -0.43
SF3B3-205ENST00000564899 ADCYAP1R1P41586 468 aa12.38□□□□□ -0.43
SF3B3-205ENST00000564899 AFMP43652 599 aa12.38□□□□□ -0.43
SF3B3-205ENST00000564899 CELF3Q5SZQ8 465 aaKnown RBP12.38□□□□□ -0.43
SF3B3-205ENST00000564899 MIS18BP1Q6P0N0 1132 aa12.38□□□□□ -0.43
SF3B3-205ENST00000564899 RBM43Q6ZSC3 357 aaKnown RBP12.38□□□□□ -0.43
SF3B3-205ENST00000564899 KCNK18Q7Z418 384 aa12.38□□□□□ -0.43
SF3B3-205ENST00000564899 TPH2Q8IWU9 490 aa12.38□□□□□ -0.43
SF3B3-205ENST00000564899 DHX37Q8IY37 1157 aaKnown RBP12.38□□□□□ -0.43
SF3B3-205ENST00000564899 TRMT44Q8IYL2 757 aaKnown RBP12.38□□□□□ -0.43
SF3B3-205ENST00000564899 BANK1Q8NDB2 785 aa12.38□□□□□ -0.43
SF3B3-205ENST00000564899 LARP4BQ92615 738 aaKnown RBP12.38□□□□□ -0.43
SF3B3-205ENST00000564899 RAD54LQ92698 747 aa12.38□□□□□ -0.43
SF3B3-205ENST00000564899 COPS5Q92905 334 aa12.38□□□□□ -0.43
SF3B3-205ENST00000564899 BLOC1S4Q9NUP1 217 aa12.38□□□□□ -0.43
SF3B3-205ENST00000564899 ZNFX1Q9P2E3 1918 aaKnown RBP12.38□□□□□ -0.43
SF3B3-205ENST00000564899 E9PMD0 336 aa12.37□□□□□ -0.43
SF3B3-205ENST00000564899 NOP56O00567 594 aaKnown RBP12.37□□□□□ -0.43
SF3B3-205ENST00000564899 GTPBP6O43824 516 aaPredicted RBP12.37□□□□□ -0.43
SF3B3-205ENST00000564899 GH1P01241 217 aa12.37□□□□□ -0.43
SF3B3-205ENST00000564899 SUPT20HL2P0C7V6 817 aa12.37□□□□□ -0.43
SF3B3-205ENST00000564899 PRR29P0C7W0 189 aa12.37□□□□□ -0.43
SF3B3-205ENST00000564899 QARSP47897 775 aaKnown RBP12.37□□□□□ -0.43
SF3B3-205ENST00000564899 PNOCQ13519 176 aa12.37□□□□□ -0.43
SF3B3-205ENST00000564899 MCM6Q14566 821 aa12.37□□□□□ -0.43
SF3B3-205ENST00000564899 GRIN2CQ14957 1233 aa12.37□□□□□ -0.43
SF3B3-205ENST00000564899 PRAMEF19Q5SWL8 479 aa12.37□□□□□ -0.43
SF3B3-205ENST00000564899 TMEM63BQ5T3F8 832 aa12.37□□□□□ -0.43
SF3B3-205ENST00000564899 MFSD14CQ5VZR4 134 aa12.37□□□□□ -0.43
SF3B3-205ENST00000564899 ABHD15Q6UXT9 468 aa12.37□□□□□ -0.43
SF3B3-205ENST00000564899 SLC39A5Q6ZMH5 540 aa12.37□□□□□ -0.43
SF3B3-205ENST00000564899 SV2BQ7L1I2 683 aa12.37□□□□□ -0.43
SF3B3-205ENST00000564899 KCTD17Q8N5Z5 321 aa12.37□□□□□ -0.43
SF3B3-205ENST00000564899 STAMQ92783 540 aa12.37□□□□□ -0.43
SF3B3-205ENST00000564899 ERCC4Q92889 916 aaPredicted RBP12.37□□□□□ -0.43
SF3B3-205ENST00000564899 ZSWIM4Q9H7M6 989 aa12.37□□□□□ -0.43
SF3B3-205ENST00000564899 DNM3Q9UQ16 869 aa12.37□□□□□ -0.43
SF3B3-205ENST00000564899 TELO2Q9Y4R8 837 aa12.37□□□□□ -0.43
SF3B3-205ENST00000564899 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.36□□□□□ -0.43
SF3B3-205ENST00000564899 BACH1O14867 736 aa12.36□□□□□ -0.43
SF3B3-205ENST00000564899 NKRFO15226 690 aaKnown RBP eCLIP12.36□□□□□ -0.43
SF3B3-205ENST00000564899 DKC1O60832 514 aaKnown RBP eCLIP12.36□□□□□ -0.43
SF3B3-205ENST00000564899 MYCNP04198 464 aaPredicted RBP12.36□□□□□ -0.43
SF3B3-205ENST00000564899 SSBP05455 408 aaKnown RBP eCLIP12.36□□□□□ -0.43
SF3B3-205ENST00000564899 PLA2G4BP0C869 781 aa12.36□□□□□ -0.43
SF3B3-205ENST00000564899 ZNF865P0CJ78 1059 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms