RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 SLC5A5Q92911 643 aa20.74■□□□□ 0.91
SYNGR3-204ENST00000564642 NKX2-4Q9H2Z4 354 aa20.74■□□□□ 0.91
SYNGR3-204ENST00000564642 DDX25Q9UHL0 483 aaKnown RBP20.74■□□□□ 0.91
SYNGR3-204ENST00000564642 WDR81Q562E7 1941 aa20.74■□□□□ 0.91
SYNGR3-204ENST00000564642 KIF28PB7ZC32 967 aa20.73■□□□□ 0.91
SYNGR3-204ENST00000564642 SFNP31947 248 aa20.73■□□□□ 0.91
SYNGR3-204ENST00000564642 WDR5P61964 334 aaKnown RBP20.73■□□□□ 0.91
SYNGR3-204ENST00000564642 DBF4BQ8NFT6 615 aa20.73■□□□□ 0.91
SYNGR3-204ENST00000564642 TRAPPC12Q8WVT3 735 aa20.73■□□□□ 0.91
SYNGR3-204ENST00000564642 SEPT8Q92599 483 aa20.73■□□□□ 0.91
SYNGR3-204ENST00000564642 CDX2Q99626 313 aaPredicted RBP20.73■□□□□ 0.91
SYNGR3-204ENST00000564642 NAP1L4Q99733 375 aaKnown RBP20.73■□□□□ 0.91
SYNGR3-204ENST00000564642 SH2B1Q9NRF2 756 aaPredicted RBP20.73■□□□□ 0.91
SYNGR3-204ENST00000564642 DISC1Q9NRI5 854 aa20.73■□□□□ 0.91
SYNGR3-204ENST00000564642 GABBR1Q9UBS5 961 aa20.73■□□□□ 0.91
SYNGR3-204ENST00000564642 YBX2Q9Y2T7 364 aaKnown RBP20.73■□□□□ 0.91
SYNGR3-204ENST00000564642 PCDHA2Q9Y5H9 948 aa20.73■□□□□ 0.91
SYNGR3-204ENST00000564642 MAFBQ9Y5Q3 323 aaPredicted RBP20.73■□□□□ 0.91
SYNGR3-204ENST00000564642 CHMP2AO43633 222 aa20.72■□□□□ 0.91
SYNGR3-204ENST00000564642 JAK3P52333 1124 aa20.72■□□□□ 0.91
SYNGR3-204ENST00000564642 FOSBP53539 338 aa20.72■□□□□ 0.91
SYNGR3-204ENST00000564642 ST3GAL1Q11201 340 aa20.72■□□□□ 0.91
SYNGR3-204ENST00000564642 PLEKHG4Q58EX7 1191 aa20.72■□□□□ 0.91
SYNGR3-204ENST00000564642 ZNF484Q5JVG2 852 aa20.72■□□□□ 0.91
SYNGR3-204ENST00000564642 TRMT1LQ7Z2T5 733 aaKnown RBP20.72■□□□□ 0.91
SYNGR3-204ENST00000564642 HERC6Q8IVU3 1022 aa20.72■□□□□ 0.91
SYNGR3-204ENST00000564642 BBXQ8WY36 941 aaPredicted RBP20.72■□□□□ 0.91
SYNGR3-204ENST00000564642 GJA10Q969M2 543 aa20.72■□□□□ 0.91
SYNGR3-204ENST00000564642 ZBTB10Q96DT7 871 aa20.72■□□□□ 0.91
SYNGR3-204ENST00000564642 MBOAT7Q96N66 472 aa20.72■□□□□ 0.91
SYNGR3-204ENST00000564642 LLPHQ9BRT6 129 aaKnown RBP20.72■□□□□ 0.91
SYNGR3-204ENST00000564642 FAM49AQ9H0Q0 323 aaPredicted RBP20.72■□□□□ 0.91
SYNGR3-204ENST00000564642 COL1A2P08123 1366 aa20.72■□□□□ 0.91
SYNGR3-204ENST00000564642 M0QZ92 97 aa20.71■□□□□ 0.91
SYNGR3-204ENST00000564642 CCNT1O60563 726 aaKnown RBP20.71■□□□□ 0.91
SYNGR3-204ENST00000564642 PSMD10O75832 226 aa20.71■□□□□ 0.91
SYNGR3-204ENST00000564642 CHRNA1P02708 482 aa20.71■□□□□ 0.91
SYNGR3-204ENST00000564642 MMP1P03956 469 aa20.71■□□□□ 0.91
SYNGR3-204ENST00000564642 MYOGP15173 224 aa20.71■□□□□ 0.91
SYNGR3-204ENST00000564642 GCFC2P16383 781 aaKnown RBP20.71■□□□□ 0.91
SYNGR3-204ENST00000564642 ATP4AP20648 1035 aa20.71■□□□□ 0.91
SYNGR3-204ENST00000564642 KLRC1P26715 233 aa20.71■□□□□ 0.91
SYNGR3-204ENST00000564642 RABEP1Q15276 862 aa20.71■□□□□ 0.91
SYNGR3-204ENST00000564642 TCTN1Q2MV58 587 aa20.71■□□□□ 0.91
SYNGR3-204ENST00000564642 IER5Q5VY09 327 aa20.71■□□□□ 0.91
SYNGR3-204ENST00000564642 PPP4R3AQ6IN85 833 aa20.71■□□□□ 0.91
SYNGR3-204ENST00000564642 MTHFD1LQ6UB35 978 aa20.71■□□□□ 0.91
SYNGR3-204ENST00000564642 ZBED2Q9BTP6 218 aa20.71■□□□□ 0.91
SYNGR3-204ENST00000564642 UNC45AQ9H3U1 944 aa20.71■□□□□ 0.91
SYNGR3-204ENST00000564642 LAMA2P24043 3122 aaKnown RBP20.7■□□□□ 0.9
SYNGR3-204ENST00000564642 ST18O60284 1047 aa20.7■□□□□ 0.9
SYNGR3-204ENST00000564642 MARCH6O60337 910 aa20.7■□□□□ 0.9
SYNGR3-204ENST00000564642 NR5A1Q13285 461 aa20.7■□□□□ 0.9
SYNGR3-204ENST00000564642 GRIN2CQ14957 1233 aa20.7■□□□□ 0.9
SYNGR3-204ENST00000564642 KRT40Q6A162 431 aa20.7■□□□□ 0.9
SYNGR3-204ENST00000564642 MIER3Q7Z3K6 550 aa20.7■□□□□ 0.9
SYNGR3-204ENST00000564642 RDM1Q8NG50 284 aa20.7■□□□□ 0.9
SYNGR3-204ENST00000564642 ETNPPLQ8TBG4 499 aa20.7■□□□□ 0.9
SYNGR3-204ENST00000564642 MYLIPQ8WY64 445 aa20.7■□□□□ 0.9
SYNGR3-204ENST00000564642 APBB2Q92870 758 aa20.7■□□□□ 0.9
SYNGR3-204ENST00000564642 FAM167AQ96KS9 214 aa20.7■□□□□ 0.9
SYNGR3-204ENST00000564642 PRDM6Q9NQX0 595 aa20.7■□□□□ 0.9
SYNGR3-204ENST00000564642 NRBP2Q9NSY0 501 aa20.7■□□□□ 0.9
SYNGR3-204ENST00000564642 CDY2AQ9Y6F7 541 aa20.7■□□□□ 0.9
SYNGR3-204ENST00000564642 PTPRSQ13332 1948 aa20.7■□□□□ 0.9
SYNGR3-204ENST00000564642 SMIM35A0A1B0GVV1 85 aa20.69■□□□□ 0.9
SYNGR3-204ENST00000564642 BTBD18B2RXH4 712 aa20.69■□□□□ 0.9
SYNGR3-204ENST00000564642 SLC37A4O43826 429 aa20.69■□□□□ 0.9
SYNGR3-204ENST00000564642 TLL1O43897 1013 aa20.69■□□□□ 0.9
SYNGR3-204ENST00000564642 DEFB103AP81534 67 aa20.69■□□□□ 0.9
SYNGR3-204ENST00000564642 MRPS6P82932 125 aaKnown RBP20.69■□□□□ 0.9
SYNGR3-204ENST00000564642 MGAT3Q09327 533 aa20.69■□□□□ 0.9
SYNGR3-204ENST00000564642 EARS2Q5JPH6 523 aaKnown RBP20.69■□□□□ 0.9
SYNGR3-204ENST00000564642 PPP2R2DQ66LE6 453 aa20.69■□□□□ 0.9
SYNGR3-204ENST00000564642 DIS3L2Q8IYB7 885 aaKnown RBP20.69■□□□□ 0.9
SYNGR3-204ENST00000564642 NME8Q8N427 588 aa20.69■□□□□ 0.9
SYNGR3-204ENST00000564642 IL27Q8NEV9 243 aa20.69■□□□□ 0.9
SYNGR3-204ENST00000564642 FAM20AQ96MK3 541 aa20.69■□□□□ 0.9
SYNGR3-204ENST00000564642 IFIH1Q9BYX4 1025 aaKnown RBP20.69■□□□□ 0.9
SYNGR3-204ENST00000564642 OSBPL7Q9BZF2 842 aa20.69■□□□□ 0.9
SYNGR3-204ENST00000564642 CEP131Q9UPN4 1083 aa20.69■□□□□ 0.9
SYNGR3-204ENST00000564642 MICAL3Q7RTP6 2002 aa20.69■□□□□ 0.9
SYNGR3-204ENST00000564642 EVPLQ92817 2033 aa20.69■□□□□ 0.9
SYNGR3-204ENST00000564642 AMHP03971 560 aa20.68■□□□□ 0.9
SYNGR3-204ENST00000564642 GHRP10912 638 aa20.68■□□□□ 0.9
SYNGR3-204ENST00000564642 FOSL2P15408 326 aa20.68■□□□□ 0.9
SYNGR3-204ENST00000564642 HMGN5P82970 282 aaKnown RBP20.68■□□□□ 0.9
SYNGR3-204ENST00000564642 SAFBQ15424 915 aaKnown RBP eCLIP20.68■□□□□ 0.9
SYNGR3-204ENST00000564642 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.68■□□□□ 0.9
SYNGR3-204ENST00000564642 FAM184AQ8NB25 1140 aa20.68■□□□□ 0.9
SYNGR3-204ENST00000564642 TNFRSF25Q93038 417 aa20.68■□□□□ 0.9
SYNGR3-204ENST00000564642 C8orf76Q96K31 380 aa20.68■□□□□ 0.9
SYNGR3-204ENST00000564642 SIP14410 1827 aa20.68■□□□□ 0.9
SYNGR3-204ENST00000564642 IGSF9BQ9UPX0 1349 aa20.68■□□□□ 0.9
SYNGR3-204ENST00000564642 LOXHD1Q8IVV2 1947 aa20.67■□□□□ 0.9
SYNGR3-204ENST00000564642 RBAK-RBAKDNI3L0D1 243 aa20.67■□□□□ 0.9
SYNGR3-204ENST00000564642 BAG4O95429 457 aaKnown RBP20.67■□□□□ 0.9
SYNGR3-204ENST00000564642 OATP04181 439 aa20.67■□□□□ 0.9
SYNGR3-204ENST00000564642 CA3P07451 260 aa20.67■□□□□ 0.9
SYNGR3-204ENST00000564642 TMEM62Q0P6H9 643 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms