RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 SAMD3Q8N6K7 520 aa8.35□□□□□ -1.07
ATXN3-249ENST00000564606 SYT2Q8N9I0 419 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-249ENST00000564606 GMCL1P1Q8NEA9 526 aa8.35□□□□□ -1.07
ATXN3-249ENST00000564606 TBC1D16Q8TBP0 767 aa8.35□□□□□ -1.07
ATXN3-249ENST00000564606 ACTRT1Q8TDG2 376 aa8.35□□□□□ -1.07
ATXN3-249ENST00000564606 BAP1Q92560 729 aa8.35□□□□□ -1.07
ATXN3-249ENST00000564606 MBOAT7Q96N66 472 aa8.35□□□□□ -1.07
ATXN3-249ENST00000564606 EPAS1Q99814 870 aa8.35□□□□□ -1.07
ATXN3-249ENST00000564606 SH3GL2Q99962 352 aa8.35□□□□□ -1.07
ATXN3-249ENST00000564606 TIPINQ9BVW5 301 aa8.35□□□□□ -1.07
ATXN3-249ENST00000564606 ANO3Q9BYT9 981 aa8.35□□□□□ -1.07
ATXN3-249ENST00000564606 ADAM33Q9BZ11 813 aa8.35□□□□□ -1.07
ATXN3-249ENST00000564606 FAM117AQ9C073 453 aa8.35□□□□□ -1.07
ATXN3-249ENST00000564606 LACRTQ9GZZ8 138 aa8.35□□□□□ -1.07
ATXN3-249ENST00000564606 CNOT10Q9H9A5 744 aaKnown RBP8.35□□□□□ -1.07
ATXN3-249ENST00000564606 JMJD4Q9H9V9 463 aa8.35□□□□□ -1.07
ATXN3-249ENST00000564606 OLFML3Q9NRN5 406 aa8.35□□□□□ -1.07
ATXN3-249ENST00000564606 USP40Q9NVE5 1235 aa8.35□□□□□ -1.07
ATXN3-249ENST00000564606 RSPH14Q9UHP6 348 aa8.35□□□□□ -1.07
ATXN3-249ENST00000564606 KCNG1Q9UIX4 513 aa8.35□□□□□ -1.07
ATXN3-249ENST00000564606 KIAA1024Q9UPX6 916 aa8.35□□□□□ -1.07
ATXN3-249ENST00000564606 FRMD4BQ9Y2L6 1034 aa8.35□□□□□ -1.07
ATXN3-249ENST00000564606 UTP11Q9Y3A2 253 aaKnown RBP8.35□□□□□ -1.07
ATXN3-249ENST00000564606 PCDHA1Q9Y5I3 950 aa8.35□□□□□ -1.07
ATXN3-249ENST00000564606 SNED1Q8TER0 1413 aa8.35□□□□□ -1.07
ATXN3-249ENST00000564606 MYH14Q7Z406 1995 aaKnown RBP8.35□□□□□ -1.07
ATXN3-249ENST00000564606 PFASO15067 1338 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 KLRG2A4D1S0 409 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-249ENST00000564606 GCOM1H8Y6P7 765 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-249ENST00000564606 RNF225M0QZC1 329 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-249ENST00000564606 NDC80O14777 642 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 PPEF1O14829 653 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-249ENST00000564606 P4HA2O15460 535 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 KCNQ2O43526 872 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 PRPF6O94906 941 aaKnown RBP8.34□□□□□ -1.07
ATXN3-249ENST00000564606 EYA4O95677 639 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 GGPS1O95749 300 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 SYF2O95926 243 aaKnown RBP8.34□□□□□ -1.07
ATXN3-249ENST00000564606 MYZAPP0CAP1 466 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 KRT13P13646 458 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 NPR1P16066 1061 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 NR2F2P24468 414 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 KLRK1P26718 216 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 CIITAP33076 1130 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 NOP2P46087 812 aaKnown RBP8.34□□□□□ -1.07
ATXN3-249ENST00000564606 CORO7P57737 925 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 CYP27A1Q02318 531 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 C2orf54Q08AI8 447 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 KCNH2Q12809 1159 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 SLC15A2Q16348 729 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 PRR5LQ6MZQ0 368 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 PPP1R2P3Q6NXS1 205 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 KDM7AQ6ZMT4 941 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 YTHDF3Q7Z739 585 aaKnown RBP8.34□□□□□ -1.07
ATXN3-249ENST00000564606 HOOK3Q86VS8 718 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 CCDC50Q8IVM0 306 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 RHOT2Q8IXI1 618 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 PARP9Q8IXQ6 854 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 NLGN1Q8N2Q7 840 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 SUPT20HQ8NEM7 779 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 DNAJC19Q96DA6 116 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 GMCL1Q96IK5 515 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 TACO1Q9BSH4 297 aaKnown RBP8.34□□□□□ -1.07
ATXN3-249ENST00000564606 WDR11Q9BZH6 1224 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 UBA5Q9GZZ9 404 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 ISCUQ9H1K1 167 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 TAF1DQ9H5J8 278 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-249ENST00000564606 KCNMB3Q9NPA1 279 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 GPCPD1Q9NPB8 672 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 GDF3Q9NR23 364 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 TMOD2Q9NZR1 351 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 SUCLA2Q9P2R7 463 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-249ENST00000564606 HDAC6Q9UBN7 1215 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 SRP68Q9UHB9 627 aaKnown RBP8.34□□□□□ -1.07
ATXN3-249ENST00000564606 TCEAL9Q9UHQ7 104 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 HDAC9Q9UKV0 1011 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 AMFRQ9UKV5 643 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 ODF2LQ9ULJ1 636 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 DAGLAQ9Y4D2 1042 aa8.34□□□□□ -1.07
ATXN3-249ENST00000564606 NHSQ6T4R5 1651 aa8.34□□□□□ -1.08
ATXN3-249ENST00000564606 FAM187AA6NFU0 413 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 MIF4GDA9UHW6 222 aaKnown RBP8.33□□□□□ -1.08
ATXN3-249ENST00000564606 EIF3HO15372 352 aaKnown RBP eCLIP8.33□□□□□ -1.08
ATXN3-249ENST00000564606 SRGAP2O75044 1071 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 COBLO75128 1261 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 PHACTR2O75167 634 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 PALMO75781 387 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 FAM13AO94988 1023 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 HEXIM1O94992 359 aaKnown RBP8.33□□□□□ -1.08
ATXN3-249ENST00000564606 TDP2O95551 362 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 CYP3A4P08684 503 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 MAPTP10636 758 aaKnown RBP8.33□□□□□ -1.08
ATXN3-249ENST00000564606 SCP2P22307 547 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 ATP5DP30049 168 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 SREBF1P36956 1147 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 GTF2IP78347 998 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 ARHGAP4P98171 946 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 IKQ13123 557 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-249ENST00000564606 AMHR2Q16671 573 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 CERKLQ49MI3 558 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms