RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 NECTIN4Q96NY8 510 aa18.39■□□□□ 0.53
RNF40-205ENST00000563909 DLL3Q9NYJ7 618 aa18.39■□□□□ 0.53
RNF40-205ENST00000563909 TELO2Q9Y4R8 837 aa18.39■□□□□ 0.53
RNF40-205ENST00000563909 NPR3P17342 541 aa18.38■□□□□ 0.53
RNF40-205ENST00000563909 NEDD9Q14511 834 aa18.38■□□□□ 0.53
RNF40-205ENST00000563909 ALX1Q15699 326 aa18.38■□□□□ 0.53
RNF40-205ENST00000563909 TPRNQ4KMQ1 711 aa18.38■□□□□ 0.53
RNF40-205ENST00000563909 CYP2W1Q8TAV3 490 aa18.38■□□□□ 0.53
RNF40-205ENST00000563909 ZKSCAN3Q9BRR0 538 aa18.38■□□□□ 0.53
RNF40-205ENST00000563909 ADAM7Q9H2U9 754 aa18.38■□□□□ 0.53
RNF40-205ENST00000563909 JMJD4Q9H9V9 463 aa18.38■□□□□ 0.53
RNF40-205ENST00000563909 R4GN57 208 aa18.38■□□□□ 0.53
RNF40-205ENST00000563909 FGAP02671 866 aa18.37■□□□□ 0.53
RNF40-205ENST00000563909 MRPS6P82932 125 aaKnown RBP18.37■□□□□ 0.53
RNF40-205ENST00000563909 SP4Q02446 784 aa18.37■□□□□ 0.53
RNF40-205ENST00000563909 GHRHRQ02643 423 aa18.37■□□□□ 0.53
RNF40-205ENST00000563909 PPFIA1Q13136 1202 aa18.37■□□□□ 0.53
RNF40-205ENST00000563909 TCF25Q9BQ70 676 aa18.37■□□□□ 0.53
RNF40-205ENST00000563909 AMNQ9BXJ7 453 aa18.37■□□□□ 0.53
RNF40-205ENST00000563909 ENTPD7Q9NQZ7 604 aa18.37■□□□□ 0.53
RNF40-205ENST00000563909 MAP3K20Q9NYL2 800 aaKnown RBP18.37■□□□□ 0.53
RNF40-205ENST00000563909 TUBE1Q9UJT0 475 aa18.37■□□□□ 0.53
RNF40-205ENST00000563909 PADI3Q9ULW8 664 aa18.37■□□□□ 0.53
RNF40-205ENST00000563909 HIDE1A8MVS5 230 aa18.36■□□□□ 0.53
RNF40-205ENST00000563909 SPATA31C2B4DYI2 1134 aa18.36■□□□□ 0.53
RNF40-205ENST00000563909 ITIH3Q06033 890 aa18.36■□□□□ 0.53
RNF40-205ENST00000563909 GNPTABQ3T906 1256 aa18.36■□□□□ 0.53
RNF40-205ENST00000563909 ZDHHC14Q8IZN3 488 aa18.36■□□□□ 0.53
RNF40-205ENST00000563909 TDRD5Q8NAT2 981 aaKnown RBP18.36■□□□□ 0.53
RNF40-205ENST00000563909 PNMA1Q8ND90 353 aa18.36■□□□□ 0.53
RNF40-205ENST00000563909 RTP3Q9BQQ7 232 aa18.36■□□□□ 0.53
RNF40-205ENST00000563909 HELLSQ9NRZ9 838 aa18.36■□□□□ 0.53
RNF40-205ENST00000563909 PCDHB7Q9Y5E2 793 aa18.36■□□□□ 0.53
RNF40-205ENST00000563909 BAHCC1Q9P281 2608 aa18.36■□□□□ 0.53
RNF40-205ENST00000563909 TBKBP1A7MCY6 615 aa18.35■□□□□ 0.53
RNF40-205ENST00000563909 WEE2P0C1S8 567 aa18.35■□□□□ 0.53
RNF40-205ENST00000563909 GSPT1P15170 499 aaKnown RBP18.35■□□□□ 0.53
RNF40-205ENST00000563909 HAND2P61296 217 aa18.35■□□□□ 0.53
RNF40-205ENST00000563909 PAK2Q13177 524 aa18.35■□□□□ 0.53
RNF40-205ENST00000563909 GRIK4Q16099 956 aa18.35■□□□□ 0.53
RNF40-205ENST00000563909 RSPO4Q2I0M5 234 aaPredicted RBP18.35■□□□□ 0.53
RNF40-205ENST00000563909 ASPRV1Q53RT3 343 aa18.35■□□□□ 0.53
RNF40-205ENST00000563909 MFSD6Q6ZSS7 791 aa18.35■□□□□ 0.53
RNF40-205ENST00000563909 FCHSD1Q86WN1 690 aa18.35■□□□□ 0.53
RNF40-205ENST00000563909 SKAP1Q86WV1 359 aa18.35■□□□□ 0.53
RNF40-205ENST00000563909 DGKHQ86XP1 1220 aa18.35■□□□□ 0.53
RNF40-205ENST00000563909 COLGALT1Q8NBJ5 622 aa18.35■□□□□ 0.53
RNF40-205ENST00000563909 CASP10Q92851 521 aa18.35■□□□□ 0.53
RNF40-205ENST00000563909 FAM49AQ9H0Q0 323 aaPredicted RBP18.35■□□□□ 0.53
RNF40-205ENST00000563909 TYW1Q9NV66 732 aaKnown RBP18.35■□□□□ 0.53
RNF40-205ENST00000563909 HCSTQ9UBK5 93 aa18.35■□□□□ 0.53
RNF40-205ENST00000563909 PUF60Q9UHX1 559 aaKnown RBP18.35■□□□□ 0.53
RNF40-205ENST00000563909 PCDHA1Q9Y5I3 950 aa18.35■□□□□ 0.53
RNF40-205ENST00000563909 CHD8Q9HCK8 2581 aa18.35■□□□□ 0.53
RNF40-205ENST00000563909 SDSP20132 328 aa18.34■□□□□ 0.53
RNF40-205ENST00000563909 MTHFRP42898 656 aa18.34■□□□□ 0.53
RNF40-205ENST00000563909 MARCH8Q5T0T0 291 aa18.34■□□□□ 0.53
RNF40-205ENST00000563909 IER5Q5VY09 327 aa18.34■□□□□ 0.53
RNF40-205ENST00000563909 PLCD3Q8N3E9 789 aa18.34■□□□□ 0.53
RNF40-205ENST00000563909 DCLK2Q8N568 766 aa18.34■□□□□ 0.53
RNF40-205ENST00000563909 MRPS27Q92552 414 aaKnown RBP18.34■□□□□ 0.53
RNF40-205ENST00000563909 RUBCNQ92622 972 aa18.34■□□□□ 0.53
RNF40-205ENST00000563909 KAT14Q9H8E8 782 aa18.34■□□□□ 0.53
RNF40-205ENST00000563909 NGRNQ9NPE2 291 aaKnown RBP18.34■□□□□ 0.53
RNF40-205ENST00000563909 RTEL1Q9NZ71 1219 aa18.34■□□□□ 0.53
RNF40-205ENST00000563909 LZTS1Q9Y250 596 aa18.34■□□□□ 0.53
RNF40-205ENST00000563909 GTF3C3Q9Y5Q9 886 aa18.34■□□□□ 0.53
RNF40-205ENST00000563909 SQORQ9Y6N5 450 aa18.34■□□□□ 0.53
RNF40-205ENST00000563909 MBLAC1A4D2B0 266 aaPredicted RBP18.33■□□□□ 0.52
RNF40-205ENST00000563909 HIP1O00291 1037 aa18.33■□□□□ 0.52
RNF40-205ENST00000563909 PARP1P09874 1014 aaKnown RBP18.33■□□□□ 0.52
RNF40-205ENST00000563909 SARSP49591 514 aaKnown RBP18.33■□□□□ 0.52
RNF40-205ENST00000563909 MRPS9P82933 396 aaKnown RBP18.33■□□□□ 0.52
RNF40-205ENST00000563909 TMEM62Q0P6H9 643 aa18.33■□□□□ 0.52
RNF40-205ENST00000563909 ST3GAL2Q16842 350 aa18.33■□□□□ 0.52
RNF40-205ENST00000563909 FAM102BQ5T8I3 360 aa18.33■□□□□ 0.52
RNF40-205ENST00000563909 ZBTB10Q96DT7 871 aa18.33■□□□□ 0.52
RNF40-205ENST00000563909 TMX1Q9H3N1 280 aa18.33■□□□□ 0.52
RNF40-205ENST00000563909 ERVK-5Q9HDB9 667 aa18.33■□□□□ 0.52
RNF40-205ENST00000563909 FBXL21Q9UKT6 434 aa18.33■□□□□ 0.52
RNF40-205ENST00000563909 HCFC2Q9Y5Z7 792 aa18.33■□□□□ 0.52
RNF40-205ENST00000563909 KAT6AQ92794 2004 aa18.33■□□□□ 0.52
RNF40-205ENST00000563909 SPTBN2O15020 2390 aa18.33■□□□□ 0.52
RNF40-205ENST00000563909 MYH6P13533 1939 aa18.32■□□□□ 0.52
RNF40-205ENST00000563909 GCOM1H8Y6P7 765 aaPredicted RBP18.32■□□□□ 0.52
RNF40-205ENST00000563909 PPP1R11O60927 126 aaPredicted RBP18.32■□□□□ 0.52
RNF40-205ENST00000563909 POLR2MP0CAP2 368 aa18.32■□□□□ 0.52
RNF40-205ENST00000563909 MARK3P27448 753 aa18.32■□□□□ 0.52
RNF40-205ENST00000563909 TCF7P36402 384 aaPredicted RBP18.32■□□□□ 0.52
RNF40-205ENST00000563909 IGBP1P78318 339 aa18.32■□□□□ 0.52
RNF40-205ENST00000563909 SEMA3FQ13275 785 aa18.32■□□□□ 0.52
RNF40-205ENST00000563909 MCMDC2Q4G0Z9 681 aa18.32■□□□□ 0.52
RNF40-205ENST00000563909 SIX5Q8N196 739 aa18.32■□□□□ 0.52
RNF40-205ENST00000563909 SAMD3Q8N6K7 520 aa18.32■□□□□ 0.52
RNF40-205ENST00000563909 FAM227BQ96M60 508 aa18.32■□□□□ 0.52
RNF40-205ENST00000563909 INPP4AQ96PE3 977 aaPredicted RBP18.32■□□□□ 0.52
RNF40-205ENST00000563909 DBR1Q9UK59 544 aaKnown RBP18.32■□□□□ 0.52
RNF40-205ENST00000563909 TRPV2Q9Y5S1 764 aa18.32■□□□□ 0.52
RNF40-205ENST00000563909 OTOGLQ3ZCN5 2332 aa18.32■□□□□ 0.52
RNF40-205ENST00000563909 A0A0D9SFI3 127 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms