RNA–Protein interactions for RNA: ENST00000563412.1

TUBGCP4-205, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 5

Gene TUBGCP4, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-205ENST00000563412 CPXCR1Q8N123 301 aa7.3□□□□□ -1.24
TUBGCP4-205ENST00000563412 PCSK9Q8NBP7 692 aaKnown RBP7.3□□□□□ -1.24
TUBGCP4-205ENST00000563412 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.3□□□□□ -1.24
TUBGCP4-205ENST00000563412 PHOSPHO2Q8TCD6 241 aa7.3□□□□□ -1.24
TUBGCP4-205ENST00000563412 VTI1AQ96AJ9 217 aa7.3□□□□□ -1.24
TUBGCP4-205ENST00000563412 LENG9Q96B70 501 aa7.3□□□□□ -1.24
TUBGCP4-205ENST00000563412 MTMR9Q96QG7 549 aa7.3□□□□□ -1.24
TUBGCP4-205ENST00000563412 REPIN1Q9BWE0 567 aaKnown RBP7.3□□□□□ -1.24
TUBGCP4-205ENST00000563412 TMEM60Q9H2L4 133 aa7.3□□□□□ -1.24
TUBGCP4-205ENST00000563412 UBE2ZQ9H832 354 aaPredicted RBP7.3□□□□□ -1.24
TUBGCP4-205ENST00000563412 RNF146Q9NTX7 359 aa7.3□□□□□ -1.24
TUBGCP4-205ENST00000563412 MAP3K20Q9NYL2 800 aaKnown RBP7.3□□□□□ -1.24
TUBGCP4-205ENST00000563412 CEP131Q9UPN4 1083 aa7.3□□□□□ -1.24
TUBGCP4-205ENST00000563412 SRPRBQ9Y5M8 271 aaKnown RBP7.3□□□□□ -1.24
TUBGCP4-205ENST00000563412 DDX49Q9Y6V7 483 aaKnown RBP7.3□□□□□ -1.24
TUBGCP4-205ENST00000563412 ARVCFO00192 962 aa7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 LAD1O00515 517 aa7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 SLC37A4O43826 429 aa7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 TDP2O95551 362 aa7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 PGK1P00558 417 aa7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 CFBP00751 764 aa7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 PFKMP08237 780 aa7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 GCFC2P16383 781 aaKnown RBP7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 STAT3P40763 770 aa7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 PRPHP41219 470 aa7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 RPS6P62753 249 aaKnown RBP7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 ARHGAP4P98171 946 aa7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 SNW1Q13573 536 aaKnown RBP7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 LETM2Q2VYF4 491 aa7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 SNRNP48Q6IEG0 339 aaKnown RBP7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 MCF2L2Q86YR7 1114 aa7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 SUGP1Q8IWZ8 645 aaKnown RBP7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 FMR1NBQ8N0W7 255 aaPredicted RBP7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 SHCBP1Q8NEM2 672 aa7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 PRSS33Q8NF86 280 aa7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 SYTL5Q8TDW5 730 aaPredicted RBP7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 CLIC6Q96NY7 704 aa7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 TRERF1Q96PN7 1200 aa7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 MOV10L1Q9BXT6 1211 aaKnown RBP7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 MROH8Q9H579 483 aa7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 PRM3Q9NNZ6 103 aa7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 HOMER2Q9NSB8 354 aa7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 TMEM63CQ9P1W3 806 aa7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 HPSEQ9Y251 543 aa7.29□□□□□ -1.24
TUBGCP4-205ENST00000563412 IGLV3-22A0A075B6J6 115 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 SPDYE3A6NKU9 549 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 FAM86B1E9PN63 330 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 NEMFO60524 1076 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 CCNT1O60563 726 aaKnown RBP7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 NR1I2O75469 434 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 KRT37O76014 449 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 CA3P07451 260 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 FAM86B2P0C5J1 330 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 AKR1A1P14550 325 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 MYOGP15173 224 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 FAM160A1Q05DH4 1040 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 TCF15Q12870 199 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 GRB10Q13322 594 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 KCNA10Q16322 511 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 Q4G0T1 1027 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 TMEM259Q4ZIN3 620 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 HERC4Q5GLZ8 1057 aaPredicted RBP7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 SLC30A10Q6XR72 485 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 USP49Q70CQ1 688 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 FCHSD1Q86WN1 690 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 FSIP1Q8NA03 581 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 KLHDC9Q8NEP7 349 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 CHST13Q8NET6 341 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 IL31RAQ8NI17 732 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 ARNTL2Q8WYA1 636 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 MRPS27Q92552 414 aaKnown RBP7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 EDAQ92838 391 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 HAS1Q92839 578 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 ATOH1Q92858 354 aaPredicted RBP7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 PBXIP1Q96AQ6 731 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 NAP1L4Q99733 375 aaKnown RBP7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 SPATC1LQ9H0A9 340 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 CSRNP2Q9H175 543 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 ACAD9Q9H845 621 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 SPC25Q9HBM1 224 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 KCNMB3Q9NPA1 279 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 A1CFQ9NQ94 594 aaKnown RBP7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 CYP39A1Q9NYL5 469 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 DIS3Q9Y2L1 958 aaKnown RBP7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 CTDP1Q9Y5B0 961 aaPredicted RBP7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 ACACBO00763 2458 aa7.28□□□□□ -1.24
TUBGCP4-205ENST00000563412 ASTN1O14525 1302 aa7.27□□□□□ -1.24
TUBGCP4-205ENST00000563412 LRRC37A2A6NM11 1700 aa7.27□□□□□ -1.25
TUBGCP4-205ENST00000563412 A0A087X0B3 334 aa7.27□□□□□ -1.25
TUBGCP4-205ENST00000563412 A0A0U1RQG5 324 aaPredicted RBP7.27□□□□□ -1.25
TUBGCP4-205ENST00000563412 A0A1B0GVL5 298 aa7.27□□□□□ -1.25
TUBGCP4-205ENST00000563412 GOLGA6L4A6NEF3 574 aa7.27□□□□□ -1.25
TUBGCP4-205ENST00000563412 ZBBXA8MT70 800 aa7.27□□□□□ -1.25
TUBGCP4-205ENST00000563412 COBLO75128 1261 aa7.27□□□□□ -1.25
TUBGCP4-205ENST00000563412 OR52Z1P0C646 297 aa7.27□□□□□ -1.25
TUBGCP4-205ENST00000563412 FCER1AP12319 257 aa7.27□□□□□ -1.25
TUBGCP4-205ENST00000563412 ACTN1P12814 892 aa7.27□□□□□ -1.25
TUBGCP4-205ENST00000563412 PFKFB1P16118 471 aa7.27□□□□□ -1.25
TUBGCP4-205ENST00000563412 KCNA5P22460 613 aa7.27□□□□□ -1.25
TUBGCP4-205ENST00000563412 CYP2C18P33260 490 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms