RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 SORBS3O60504 671 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 NBNO60934 754 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 PPFIA4O75335 1185 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 LGR5O75473 907 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 GGPS1O95749 300 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 MMP1P03956 469 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 ZNF286BP0CG31 522 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 CCND2P30279 289 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 MCM5P33992 734 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 LIFRP42702 1097 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 NRIP1P48552 1158 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 PSEN2P49810 448 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 RBL2Q08999 1139 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 SEMA3FQ13275 785 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 TRIM71Q2Q1W2 868 aaKnown RBP11.65□□□□□ -0.54
SNX29-202ENST00000563308 KCNV1Q6PIU1 500 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 TRAF7Q6Q0C0 670 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 RBM23Q86U06 439 aaKnown RBP11.65□□□□□ -0.54
SNX29-202ENST00000563308 DHX37Q8IY37 1157 aaKnown RBP11.65□□□□□ -0.54
SNX29-202ENST00000563308 RIN2Q8WYP3 895 aaPredicted RBP11.65□□□□□ -0.54
SNX29-202ENST00000563308 WNT8BQ93098 351 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 IL17RAQ96F46 866 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 BORCS6Q96GS4 357 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 NEK1Q96PY6 1258 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 C16orf70Q9BSU1 422 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 GTF2IRD1Q9UHL9 959 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 ZMIZ1Q9ULJ6 1067 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 LHX6Q9UPM6 363 aa11.65□□□□□ -0.54
SNX29-202ENST00000563308 MICAL3Q7RTP6 2002 aa11.64□□□□□ -0.55
SNX29-202ENST00000563308 PIK3CDO00329 1044 aa11.64□□□□□ -0.55
SNX29-202ENST00000563308 MEIS2O14770 477 aa11.64□□□□□ -0.55
SNX29-202ENST00000563308 TGFB3P10600 412 aa11.64□□□□□ -0.55
SNX29-202ENST00000563308 RXRAP19793 462 aa11.64□□□□□ -0.55
SNX29-202ENST00000563308 MFSD10Q14728 455 aa11.64□□□□□ -0.55
SNX29-202ENST00000563308 KIAA0753Q2KHM9 967 aa11.64□□□□□ -0.55
SNX29-202ENST00000563308 TCTN1Q2MV58 587 aa11.64□□□□□ -0.55
SNX29-202ENST00000563308 USP17L6PQ6QN14 398 aa11.64□□□□□ -0.55
SNX29-202ENST00000563308 CASC1Q6TDU7 716 aa11.64□□□□□ -0.55
SNX29-202ENST00000563308 CMTR1Q8N1G2 835 aaKnown RBP11.64□□□□□ -0.55
SNX29-202ENST00000563308 DDX1Q92499 740 aaKnown RBP11.64□□□□□ -0.55
SNX29-202ENST00000563308 TMEM87BQ96K49 555 aa11.64□□□□□ -0.55
SNX29-202ENST00000563308 SPATA33Q96N06 139 aa11.64□□□□□ -0.55
SNX29-202ENST00000563308 INPP4AQ96PE3 977 aaPredicted RBP11.64□□□□□ -0.55
SNX29-202ENST00000563308 LZTS2Q9BRK4 669 aa11.64□□□□□ -0.55
SNX29-202ENST00000563308 ALG1Q9BT22 464 aa11.64□□□□□ -0.55
SNX29-202ENST00000563308 LRRC2Q9BYS8 371 aa11.64□□□□□ -0.55
SNX29-202ENST00000563308 IFIH1Q9BYX4 1025 aaKnown RBP11.64□□□□□ -0.55
SNX29-202ENST00000563308 ANO2Q9NQ90 1003 aa11.64□□□□□ -0.55
SNX29-202ENST00000563308 TELO2Q9Y4R8 837 aa11.64□□□□□ -0.55
SNX29-202ENST00000563308 OTOGLQ3ZCN5 2332 aa11.63□□□□□ -0.55
SNX29-202ENST00000563308 SPATA31C2B4DYI2 1134 aa11.63□□□□□ -0.55
SNX29-202ENST00000563308 PI15O43692 258 aa11.63□□□□□ -0.55
SNX29-202ENST00000563308 CKBP12277 381 aa11.63□□□□□ -0.55
SNX29-202ENST00000563308 HOXC8P31273 242 aa11.63□□□□□ -0.55
SNX29-202ENST00000563308 KIF5BP33176 963 aa11.63□□□□□ -0.55
SNX29-202ENST00000563308 EXOSC10Q01780 885 aaKnown RBP11.63□□□□□ -0.55
SNX29-202ENST00000563308 CWF19L1Q69YN2 538 aaKnown RBP11.63□□□□□ -0.55
SNX29-202ENST00000563308 CENPQQ7L2Z9 268 aaPredicted RBP11.63□□□□□ -0.55
SNX29-202ENST00000563308 SGMS1Q86VZ5 419 aa11.63□□□□□ -0.55
SNX29-202ENST00000563308 RAB11FIP4Q86YS3 637 aa11.63□□□□□ -0.55
SNX29-202ENST00000563308 RASEFQ8IZ41 740 aa11.63□□□□□ -0.55
SNX29-202ENST00000563308 TMTC2Q8N394 836 aa11.63□□□□□ -0.55
SNX29-202ENST00000563308 C7orf31Q8N865 590 aa11.63□□□□□ -0.55
SNX29-202ENST00000563308 CTCFLQ8NI51 663 aaPredicted RBP11.63□□□□□ -0.55
SNX29-202ENST00000563308 SUSD6Q92537 303 aa11.63□□□□□ -0.55
SNX29-202ENST00000563308 TOP1MTQ969P6 601 aa11.63□□□□□ -0.55
SNX29-202ENST00000563308 RRP36Q96EU6 259 aaKnown RBP11.63□□□□□ -0.55
SNX29-202ENST00000563308 TLE6Q9H808 572 aa11.63□□□□□ -0.55
SNX29-202ENST00000563308 ANKFY1Q9P2R3 1169 aa11.63□□□□□ -0.55
SNX29-202ENST00000563308 UNC79Q9P2D8 2635 aa11.63□□□□□ -0.55
SNX29-202ENST00000563308 MAST4O15021 2626 aa11.62□□□□□ -0.55
SNX29-202ENST00000563308 hCG_1642624A0A1W2PR95 340 aa11.62□□□□□ -0.55
SNX29-202ENST00000563308 EIF4E1BA6NMX2 242 aaKnown RBP11.62□□□□□ -0.55
SNX29-202ENST00000563308 GNAQP50148 359 aa11.62□□□□□ -0.55
SNX29-202ENST00000563308 FUT2Q10981 343 aa11.62□□□□□ -0.55
SNX29-202ENST00000563308 PTK7Q13308 1070 aa11.62□□□□□ -0.55
SNX29-202ENST00000563308 MBTPS1Q14703 1052 aa11.62□□□□□ -0.55
SNX29-202ENST00000563308 NFXL1Q6ZNB6 911 aa11.62□□□□□ -0.55
SNX29-202ENST00000563308 TMTC3Q6ZXV5 915 aa11.62□□□□□ -0.55
SNX29-202ENST00000563308 FANCBQ8NB91 859 aa11.62□□□□□ -0.55
SNX29-202ENST00000563308 MICAL1Q8TDZ2 1067 aa11.62□□□□□ -0.55
SNX29-202ENST00000563308 KATNAL1Q9BW62 490 aa11.62□□□□□ -0.55
SNX29-202ENST00000563308 PLVAPQ9BX97 442 aa11.62□□□□□ -0.55
SNX29-202ENST00000563308 RNF216Q9NWF9 866 aaPredicted RBP11.62□□□□□ -0.55
SNX29-202ENST00000563308 RTEL1Q9NZ71 1219 aa11.62□□□□□ -0.55
SNX29-202ENST00000563308 CCDC69A6NI79 296 aa11.61□□□□□ -0.55
SNX29-202ENST00000563308 STAM2O75886 525 aa11.61□□□□□ -0.55
SNX29-202ENST00000563308 ADCK5Q3MIX3 580 aa11.61□□□□□ -0.55
SNX29-202ENST00000563308 TSGA10IPQ3SY00 556 aa11.61□□□□□ -0.55
SNX29-202ENST00000563308 PCNX4Q63HM2 1172 aa11.61□□□□□ -0.55
SNX29-202ENST00000563308 XRRA1Q6P2D8 792 aa11.61□□□□□ -0.55
SNX29-202ENST00000563308 METTL7BQ6UX53 244 aa11.61□□□□□ -0.55
SNX29-202ENST00000563308 CYFIP1Q7L576 1253 aa11.61□□□□□ -0.55
SNX29-202ENST00000563308 DBF4BQ8NFT6 615 aa11.61□□□□□ -0.55
SNX29-202ENST00000563308 NETO1Q8TDF5 533 aa11.61□□□□□ -0.55
SNX29-202ENST00000563308 SEPT8Q92599 483 aa11.61□□□□□ -0.55
SNX29-202ENST00000563308 KIF12Q96FN5 646 aa11.61□□□□□ -0.55
SNX29-202ENST00000563308 GPR20Q99678 358 aa11.61□□□□□ -0.55
SNX29-202ENST00000563308 MLXIPQ9HAP2 919 aa11.61□□□□□ -0.55
SNX29-202ENST00000563308 SLC12A7Q9Y666 1083 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms