RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 ATN1P54259 1190 aaPredicted RBP21.07■□□□□ 0.96
RAB40C-207ENST00000563109 PTPN11Q06124 597 aaPredicted RBP21.07■□□□□ 0.96
RAB40C-207ENST00000563109 CABP7Q86V35 215 aa21.07■□□□□ 0.96
RAB40C-207ENST00000563109 C4orf19Q8IY42 314 aa21.07■□□□□ 0.96
RAB40C-207ENST00000563109 NRBP2Q9NSY0 501 aa21.07■□□□□ 0.96
RAB40C-207ENST00000563109 SEPT9Q9UHD8 586 aaPredicted RBP21.07■□□□□ 0.96
RAB40C-207ENST00000563109 KAT6AQ92794 2004 aa21.06■□□□□ 0.96
RAB40C-207ENST00000563109 ARVCFO00192 962 aa21.06■□□□□ 0.96
RAB40C-207ENST00000563109 ZNF862O60290 1169 aa21.06■□□□□ 0.96
RAB40C-207ENST00000563109 HBP1O60381 514 aa21.06■□□□□ 0.96
RAB40C-207ENST00000563109 MED24O75448 989 aa21.06■□□□□ 0.96
RAB40C-207ENST00000563109 SLITRK3O94933 977 aa21.06■□□□□ 0.96
RAB40C-207ENST00000563109 SMIM10L2AP0DMW4 78 aa21.06■□□□□ 0.96
RAB40C-207ENST00000563109 SMIM10L2BP0DMW5 78 aa21.06■□□□□ 0.96
RAB40C-207ENST00000563109 CDC25AP30304 524 aa21.06■□□□□ 0.96
RAB40C-207ENST00000563109 PPFIA1Q13136 1202 aa21.06■□□□□ 0.96
RAB40C-207ENST00000563109 ZRSR1Q15695 479 aaKnown RBP21.06■□□□□ 0.96
RAB40C-207ENST00000563109 XKR3Q5GH77 459 aa21.06■□□□□ 0.96
RAB40C-207ENST00000563109 SLC39A5Q6ZMH5 540 aa21.06■□□□□ 0.96
RAB40C-207ENST00000563109 TRMT1LQ7Z2T5 733 aaKnown RBP21.06■□□□□ 0.96
RAB40C-207ENST00000563109 UBE2Q1Q7Z7E8 422 aa21.06■□□□□ 0.96
RAB40C-207ENST00000563109 CATSPER3Q86XQ3 398 aa21.06■□□□□ 0.96
RAB40C-207ENST00000563109 ZNF579Q8NAF0 562 aaKnown RBP21.06■□□□□ 0.96
RAB40C-207ENST00000563109 CALML4Q96GE6 196 aa21.06■□□□□ 0.96
RAB40C-207ENST00000563109 CCDC43Q96MW1 224 aaKnown RBP21.06■□□□□ 0.96
RAB40C-207ENST00000563109 RNPEPQ9H4A4 650 aa21.06■□□□□ 0.96
RAB40C-207ENST00000563109 PCDHA7Q9UN72 937 aa21.06■□□□□ 0.96
RAB40C-207ENST00000563109 ARID2Q68CP9 1835 aa21.06■□□□□ 0.96
RAB40C-207ENST00000563109 DDX11L8A8MPP1 907 aa21.05■□□□□ 0.96
RAB40C-207ENST00000563109 LYPLA2O95372 231 aa21.05■□□□□ 0.96
RAB40C-207ENST00000563109 GNAT1P11488 350 aa21.05■□□□□ 0.96
RAB40C-207ENST00000563109 ATP4AP20648 1035 aa21.05■□□□□ 0.96
RAB40C-207ENST00000563109 POTEGQ6S5H5 508 aa21.05■□□□□ 0.96
RAB40C-207ENST00000563109 OTUD6AQ7L8S5 288 aa21.05■□□□□ 0.96
RAB40C-207ENST00000563109 SESTD1Q86VW0 696 aa21.05■□□□□ 0.96
RAB40C-207ENST00000563109 SYMPKQ92797 1274 aaKnown RBP21.05■□□□□ 0.96
RAB40C-207ENST00000563109 NT5C3AQ9H0P0 336 aa21.05■□□□□ 0.96
RAB40C-207ENST00000563109 GDPD2Q9HCC8 539 aa21.05■□□□□ 0.96
RAB40C-207ENST00000563109 HDAC6Q9UBN7 1215 aa21.05■□□□□ 0.96
RAB40C-207ENST00000563109 COL1A2P08123 1366 aa21.05■□□□□ 0.96
RAB40C-207ENST00000563109 GRIN2DO15399 1336 aa21.04■□□□□ 0.96
RAB40C-207ENST00000563109 NRCAMQ92823 1304 aa21.04■□□□□ 0.96
RAB40C-207ENST00000563109 C17orf102A2RUQ5 167 aa21.04■□□□□ 0.96
RAB40C-207ENST00000563109 RRN3P2A6NIE6 340 aa21.04■□□□□ 0.96
RAB40C-207ENST00000563109 TLR3O15455 904 aaKnown RBP21.04■□□□□ 0.96
RAB40C-207ENST00000563109 SPATA31C1P0DKV0 1188 aa21.04■□□□□ 0.96
RAB40C-207ENST00000563109 YWHABP31946 246 aaKnown RBP21.04■□□□□ 0.96
RAB40C-207ENST00000563109 SNX17Q15036 470 aa21.04■□□□□ 0.96
RAB40C-207ENST00000563109 GRIK4Q16099 956 aa21.04■□□□□ 0.96
RAB40C-207ENST00000563109 ZNF484Q5JVG2 852 aa21.04■□□□□ 0.96
RAB40C-207ENST00000563109 SPECC1Q5M775 1068 aa21.04■□□□□ 0.96
RAB40C-207ENST00000563109 C1orf53Q5VUE5 145 aa21.04■□□□□ 0.96
RAB40C-207ENST00000563109 SLC43A3Q8NBI5 491 aa21.04■□□□□ 0.96
RAB40C-207ENST00000563109 NACC1Q96RE7 527 aa21.04■□□□□ 0.96
RAB40C-207ENST00000563109 MMTAG2Q9BU76 263 aaKnown RBP21.04■□□□□ 0.96
RAB40C-207ENST00000563109 CCSER1Q9C0I3 900 aa21.04■□□□□ 0.96
RAB40C-207ENST00000563109 WRAP73Q9P2S5 460 aaPredicted RBP21.04■□□□□ 0.96
RAB40C-207ENST00000563109 CCDC39Q9UFE4 941 aa21.04■□□□□ 0.96
RAB40C-207ENST00000563109 GTF2IRD1Q9UHL9 959 aa21.04■□□□□ 0.96
RAB40C-207ENST00000563109 GOLGA6L4A6NEF3 574 aa21.03■□□□□ 0.96
RAB40C-207ENST00000563109 INSRRP14616 1297 aa21.03■□□□□ 0.96
RAB40C-207ENST00000563109 IGBP1P78318 339 aa21.03■□□□□ 0.96
RAB40C-207ENST00000563109 PPP1R13LQ8WUF5 828 aa21.03■□□□□ 0.96
RAB40C-207ENST00000563109 HTATIP2Q9BUP3 242 aa21.03■□□□□ 0.96
RAB40C-207ENST00000563109 DDX19AQ9NUU7 478 aaKnown RBP21.03■□□□□ 0.96
RAB40C-207ENST00000563109 FAM13BQ9NYF5 915 aa21.03■□□□□ 0.96
RAB40C-207ENST00000563109 KIAA1024Q9UPX6 916 aa21.03■□□□□ 0.96
RAB40C-207ENST00000563109 NOD1Q9Y239 953 aa21.03■□□□□ 0.96
RAB40C-207ENST00000563109 PQBP1O60828 265 aaKnown RBP21.02■□□□□ 0.96
RAB40C-207ENST00000563109 RTP1P59025 263 aa21.02■□□□□ 0.96
RAB40C-207ENST00000563109 TRIM60Q495X7 471 aa21.02■□□□□ 0.96
RAB40C-207ENST00000563109 MTERF2Q49AM1 385 aa21.02■□□□□ 0.96
RAB40C-207ENST00000563109 HYIQ5T013 277 aa21.02■□□□□ 0.96
RAB40C-207ENST00000563109 AXDND1Q5T1B0 1012 aaPredicted RBP21.02■□□□□ 0.96
RAB40C-207ENST00000563109 KCTD17Q8N5Z5 321 aa21.02■□□□□ 0.96
RAB40C-207ENST00000563109 LMBR1Q8WVP7 490 aa21.02■□□□□ 0.96
RAB40C-207ENST00000563109 EPSTI1Q96J88 318 aa21.02■□□□□ 0.96
RAB40C-207ENST00000563109 GBP4Q96PP9 640 aa21.02■□□□□ 0.96
RAB40C-207ENST00000563109 NIFKQ9BYG3 293 aaKnown RBP21.02■□□□□ 0.96
RAB40C-207ENST00000563109 ANKEF1Q9NU02 776 aa21.02■□□□□ 0.96
RAB40C-207ENST00000563109 SETD4Q9NVD3 440 aa21.02■□□□□ 0.96
RAB40C-207ENST00000563109 ATP11BQ9Y2G3 1177 aa21.02■□□□□ 0.96
RAB40C-207ENST00000563109 PPME1Q9Y570 386 aa21.02■□□□□ 0.96
RAB40C-207ENST00000563109 DCDC2CA8MYV0 355 aa21.01■□□□□ 0.95
RAB40C-207ENST00000563109 XRCC6P12956 609 aaKnown RBP eCLIP21.01■□□□□ 0.95
RAB40C-207ENST00000563109 CDK7P50613 346 aa21.01■□□□□ 0.95
RAB40C-207ENST00000563109 KARSQ15046 597 aaKnown RBP21.01■□□□□ 0.95
RAB40C-207ENST00000563109 LRRC26Q2I0M4 334 aa21.01■□□□□ 0.95
RAB40C-207ENST00000563109 PLA2G4FQ68DD2 849 aa21.01■□□□□ 0.95
RAB40C-207ENST00000563109 ADALQ6DHV7 355 aa21.01■□□□□ 0.95
RAB40C-207ENST00000563109 ANO5Q75V66 913 aa21.01■□□□□ 0.95
RAB40C-207ENST00000563109 CEP170P1Q96L14 293 aa21.01■□□□□ 0.95
RAB40C-207ENST00000563109 TUBE1Q9UJT0 475 aa21.01■□□□□ 0.95
RAB40C-207ENST00000563109 DNM3Q9UQ16 869 aa21.01■□□□□ 0.95
RAB40C-207ENST00000563109 STBD1O95210 358 aa21■□□□□ 0.95
RAB40C-207ENST00000563109 HOXC8P31273 242 aa21■□□□□ 0.95
RAB40C-207ENST00000563109 GRB10Q13322 594 aa21■□□□□ 0.95
RAB40C-207ENST00000563109 ECM1Q16610 540 aa21■□□□□ 0.95
RAB40C-207ENST00000563109 PTGISQ16647 500 aa21■□□□□ 0.95
RAB40C-207ENST00000563109 TMEM119Q4V9L6 283 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms