RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 TNFRSF1AP19438 455 aa6.69□□□□□ -1.34
CHD9-206ENST00000562791 PTGS1P23219 599 aa6.69□□□□□ -1.34
CHD9-206ENST00000562791 TOP3AQ13472 1001 aaPredicted RBP6.69□□□□□ -1.34
CHD9-206ENST00000562791 C2orf27AQ580R0 203 aa6.69□□□□□ -1.34
CHD9-206ENST00000562791 ZC3H12BQ5HYM0 836 aaKnown RBP6.69□□□□□ -1.34
CHD9-206ENST00000562791 ABHD17CQ6PCB6 329 aa6.69□□□□□ -1.34
CHD9-206ENST00000562791 LILRB2Q8N423 598 aa6.69□□□□□ -1.34
CHD9-206ENST00000562791 DVL3Q92997 716 aaPredicted RBP6.69□□□□□ -1.34
CHD9-206ENST00000562791 WWC2-AS2Q96NR7 200 aa6.69□□□□□ -1.34
CHD9-206ENST00000562791 GNRHR2Q96P88 292 aa6.69□□□□□ -1.34
CHD9-206ENST00000562791 INCENPQ9NQS7 918 aa6.69□□□□□ -1.34
CHD9-206ENST00000562791 GSTA4O15217 222 aa6.68□□□□□ -1.34
CHD9-206ENST00000562791 EFCAB14O75071 495 aa6.68□□□□□ -1.34
CHD9-206ENST00000562791 MMEP08473 750 aa6.68□□□□□ -1.34
CHD9-206ENST00000562791 POLD1P28340 1107 aa6.68□□□□□ -1.34
CHD9-206ENST00000562791 SF3A1Q15459 793 aaKnown RBP6.68□□□□□ -1.34
CHD9-206ENST00000562791 ZNF585AQ6P3V2 769 aa6.68□□□□□ -1.34
CHD9-206ENST00000562791 ZSWIM2Q8NEG5 633 aa6.68□□□□□ -1.34
CHD9-206ENST00000562791 THAP3Q8WTV1 239 aaPredicted RBP6.68□□□□□ -1.34
CHD9-206ENST00000562791 CELF4Q9BZC1 486 aaKnown RBP6.68□□□□□ -1.34
CHD9-206ENST00000562791 PATE3B3GLJ2 98 aa6.67□□□□□ -1.34
CHD9-206ENST00000562791 C1QTNF3-AMACRE9PGA6 284 aa6.67□□□□□ -1.34
CHD9-206ENST00000562791 SCDO00767 359 aa6.67□□□□□ -1.34
CHD9-206ENST00000562791 KCNA6P17658 529 aa6.67□□□□□ -1.34
CHD9-206ENST00000562791 ADCY8P40145 1251 aa6.67□□□□□ -1.34
CHD9-206ENST00000562791 RRADP55042 308 aa6.67□□□□□ -1.34
CHD9-206ENST00000562791 HERVK_113P62684 666 aa6.67□□□□□ -1.34
CHD9-206ENST00000562791 USP10Q14694 798 aaKnown RBP6.67□□□□□ -1.34
CHD9-206ENST00000562791 LRSAM1Q6UWE0 723 aa6.67□□□□□ -1.34
CHD9-206ENST00000562791 EP400NLQ6ZTU2 488 aa6.67□□□□□ -1.34
CHD9-206ENST00000562791 OVCH1Q7RTY7 1134 aa6.67□□□□□ -1.34
CHD9-206ENST00000562791 LRRC37BQ96QE4 947 aa6.67□□□□□ -1.34
CHD9-206ENST00000562791 AMNQ9BXJ7 453 aa6.67□□□□□ -1.34
CHD9-206ENST00000562791 TRIM39Q9HCM9 518 aa6.67□□□□□ -1.34
CHD9-206ENST00000562791 TCRBV16S1A1N1A0A5B0 115 aa6.66□□□□□ -1.34
CHD9-206ENST00000562791 RASSF10A6NK89 507 aa6.66□□□□□ -1.34
CHD9-206ENST00000562791 WDR72Q3MJ13 1102 aa6.66□□□□□ -1.34
CHD9-206ENST00000562791 IFNL2Q8IZJ0 200 aa6.66□□□□□ -1.34
CHD9-206ENST00000562791 MAGEB10Q96LZ2 347 aaPredicted RBP6.66□□□□□ -1.34
CHD9-206ENST00000562791 LMF1Q96S06 567 aa6.66□□□□□ -1.34
CHD9-206ENST00000562791 MRPL4Q9BYD3 311 aaKnown RBP6.66□□□□□ -1.34
CHD9-206ENST00000562791 KLC2Q9H0B6 622 aa6.66□□□□□ -1.34
CHD9-206ENST00000562791 OSBPL2Q9H1P3 480 aa6.66□□□□□ -1.34
CHD9-206ENST00000562791 NCOA5Q9HCD5 579 aaKnown RBP6.66□□□□□ -1.34
CHD9-206ENST00000562791 UCKL1Q9NWZ5 548 aa6.66□□□□□ -1.34
CHD9-206ENST00000562791 GALNT8Q9NY28 637 aa6.66□□□□□ -1.34
CHD9-206ENST00000562791 KCNQ2O43526 872 aa6.65□□□□□ -1.34
CHD9-206ENST00000562791 FOXS1O43638 330 aa6.65□□□□□ -1.34
CHD9-206ENST00000562791 ETV4P43268 484 aa6.65□□□□□ -1.34
CHD9-206ENST00000562791 R3HDM1Q15032 1099 aaKnown RBP6.65□□□□□ -1.34
CHD9-206ENST00000562791 RNF151Q2KHN1 245 aa6.65□□□□□ -1.34
CHD9-206ENST00000562791 SPRED1Q7Z699 444 aa6.65□□□□□ -1.34
CHD9-206ENST00000562791 PALM2Q8IXS6 379 aa6.65□□□□□ -1.34
CHD9-206ENST00000562791 Q8TCH9 128 aa6.65□□□□□ -1.34
CHD9-206ENST00000562791 ASB15Q8WXK1 588 aa6.65□□□□□ -1.34
CHD9-206ENST00000562791 CARD11Q9BXL7 1154 aa6.65□□□□□ -1.34
CHD9-206ENST00000562791 KIAA1683Q9H0B3 1180 aa6.65□□□□□ -1.34
CHD9-206ENST00000562791 SEC61A2Q9H9S3 476 aa6.65□□□□□ -1.34
CHD9-206ENST00000562791 CUTAO60888 179 aa6.64□□□□□ -1.35
CHD9-206ENST00000562791 NOLC1Q14978 699 aaKnown RBP eCLIP6.64□□□□□ -1.35
CHD9-206ENST00000562791 STILQ15468 1287 aa6.64□□□□□ -1.35
CHD9-206ENST00000562791 SOGA3Q5TF21 947 aa6.64□□□□□ -1.35
CHD9-206ENST00000562791 KANK2Q63ZY3 851 aa6.64□□□□□ -1.35
CHD9-206ENST00000562791 TCTN3Q6NUS6 607 aa6.64□□□□□ -1.35
CHD9-206ENST00000562791 DPP8Q6V1X1 898 aaPredicted RBP6.64□□□□□ -1.35
CHD9-206ENST00000562791 LARP4Q71RC2 724 aaKnown RBP eCLIP6.64□□□□□ -1.35
CHD9-206ENST00000562791 IGSF22Q8N9C0 903 aa6.64□□□□□ -1.35
CHD9-206ENST00000562791 NEIL1Q96FI4 390 aaPredicted RBP6.64□□□□□ -1.35
CHD9-206ENST00000562791 WNK4Q96J92 1243 aa6.64□□□□□ -1.35
CHD9-206ENST00000562791 ZDHHC5Q9C0B5 715 aa6.64□□□□□ -1.35
CHD9-206ENST00000562791 KANSL2Q9H9L4 492 aa6.64□□□□□ -1.35
CHD9-206ENST00000562791 KCNH7Q9NS40 1196 aa6.64□□□□□ -1.35
CHD9-206ENST00000562791 CDK11AQ9UQ88 783 aaPredicted RBP6.64□□□□□ -1.35
CHD9-206ENST00000562791 TSC22D4Q9Y3Q8 395 aa6.64□□□□□ -1.35
CHD9-206ENST00000562791 ZNF623O75123 536 aa6.63□□□□□ -1.35
CHD9-206ENST00000562791 RAPGEF3O95398 923 aa6.63□□□□□ -1.35
CHD9-206ENST00000562791 KCNQ1P51787 676 aa6.63□□□□□ -1.35
CHD9-206ENST00000562791 BMS1Q14692 1282 aaKnown RBP6.63□□□□□ -1.35
CHD9-206ENST00000562791 TBR1Q16650 682 aa6.63□□□□□ -1.35
CHD9-206ENST00000562791 TMEM177Q53S58 311 aa6.63□□□□□ -1.35
CHD9-206ENST00000562791 SH3RF3Q8TEJ3 882 aaPredicted RBP6.63□□□□□ -1.35
CHD9-206ENST00000562791 SREK1Q8WXA9 508 aaKnown RBP6.63□□□□□ -1.35
CHD9-206ENST00000562791 DLG3Q92796 817 aa6.63□□□□□ -1.35
CHD9-206ENST00000562791 CLUHP3Q96NS8 147 aa6.63□□□□□ -1.35
CHD9-206ENST00000562791 BTBD2Q9BX70 525 aa6.63□□□□□ -1.35
CHD9-206ENST00000562791 TMPRSS5Q9H3S3 457 aa6.63□□□□□ -1.35
CHD9-206ENST00000562791 CDC42EP3Q9UKI2 254 aa6.63□□□□□ -1.35
CHD9-206ENST00000562791 B3GALT1Q9Y5Z6 326 aa6.63□□□□□ -1.35
CHD9-206ENST00000562791 CCDC163A0A0D9SF12 145 aa6.62□□□□□ -1.35
CHD9-206ENST00000562791 SLC12A8A0AV02 714 aa6.62□□□□□ -1.35
CHD9-206ENST00000562791 MATN2O00339 956 aa6.62□□□□□ -1.35
CHD9-206ENST00000562791 FOXP2O15409 715 aa6.62□□□□□ -1.35
CHD9-206ENST00000562791 HMGCRP04035 888 aa6.62□□□□□ -1.35
CHD9-206ENST00000562791 ECE1P42892 770 aa6.62□□□□□ -1.35
CHD9-206ENST00000562791 SELENOPP49908 381 aa6.62□□□□□ -1.35
CHD9-206ENST00000562791 CD83Q01151 205 aa6.62□□□□□ -1.35
CHD9-206ENST00000562791 SQSTM1Q13501 440 aa6.62□□□□□ -1.35
CHD9-206ENST00000562791 CATSPEREQ5SY80 951 aa6.62□□□□□ -1.35
CHD9-206ENST00000562791 TAX1BP1Q86VP1 789 aa6.62□□□□□ -1.35
CHD9-206ENST00000562791 GBP4Q96PP9 640 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms