RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 THAP1Q9NVV9 213 aa5.36□□□□□ -1.55
TCF4-215ENST00000562638 DDX56Q9NY93 547 aaKnown RBP5.36□□□□□ -1.55
TCF4-215ENST00000562638 AIPL1Q9NZN9 384 aa5.36□□□□□ -1.55
TCF4-215ENST00000562638 DNAJC16Q9Y2G8 782 aa5.36□□□□□ -1.55
TCF4-215ENST00000562638 ZBTB1Q9Y2K1 713 aa5.36□□□□□ -1.55
TCF4-215ENST00000562638 ZNF711Q9Y462 761 aa5.36□□□□□ -1.55
TCF4-215ENST00000562638 CD2APQ9Y5K6 639 aa5.36□□□□□ -1.55
TCF4-215ENST00000562638 MROH7Q68CQ1 1323 aa5.36□□□□□ -1.55
TCF4-215ENST00000562638 RGS12O14924 1447 aa5.36□□□□□ -1.55
TCF4-215ENST00000562638 ADGRL3Q9HAR2 1447 aa5.36□□□□□ -1.55
TCF4-215ENST00000562638 AKAP12Q02952 1782 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 SMARCA4P51532 1647 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 IQSEC2Q5JU85 1478 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 PIK3C2GO75747 1445 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 PTPRKQ15262 1439 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 PDS5AQ29RF7 1337 aaKnown RBP5.35□□□□□ -1.55
TCF4-215ENST00000562638 hCG_2014768A0A024R1R8 64 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 A6NJR5 290 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 NOTOA8MTQ0 251 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 TMEM114B3SHH9 223 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 RASA4BC9J798 803 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 E9PBE3 544 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 HGSO14964 777 aaPredicted RBP5.35□□□□□ -1.55
TCF4-215ENST00000562638 PFKFB2O60825 505 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 ADAM23O75077 832 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 ZC3H11AO75152 810 aaKnown RBP eCLIP5.35□□□□□ -1.55
TCF4-215ENST00000562638 FGF18O76093 207 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 CSPG5O95196 566 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 SSBP05455 408 aaKnown RBP eCLIP5.35□□□□□ -1.55
TCF4-215ENST00000562638 ZFYP08048 801 aaPredicted RBP5.35□□□□□ -1.55
TCF4-215ENST00000562638 ABCB1P08183 1280 aaPredicted RBP5.35□□□□□ -1.55
TCF4-215ENST00000562638 COL6A2P12110 1019 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 GYS1P13807 737 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 ATP2A2P16615 1042 aaKnown RBP5.35□□□□□ -1.55
TCF4-215ENST00000562638 PTPREP23469 700 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 CFL1P23528 166 aaKnown RBP5.35□□□□□ -1.55
TCF4-215ENST00000562638 RPL9P32969 192 aaKnown RBP5.35□□□□□ -1.55
TCF4-215ENST00000562638 CHKAP35790 457 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 RFC5P40937 340 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 ZNF165P49910 485 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 COPAP53621 1224 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 ATP8B2P98198 1209 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 RUNX1T1Q06455 604 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 CDK18Q07002 472 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 ITGA9Q13797 1035 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 GNA13Q14344 377 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 NKX1-1Q15270 411 aaPredicted RBP5.35□□□□□ -1.55
TCF4-215ENST00000562638 CTC1Q2NKJ3 1217 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 KRT71Q3SY84 523 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 ZCWPW2Q504Y3 356 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 EAPPQ56P03 285 aaPredicted RBP5.35□□□□□ -1.55
TCF4-215ENST00000562638 WDR44Q5JSH3 913 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 SLC10A5Q5PT55 438 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 ARMC4Q5T2S8 1044 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 TCERG1LQ5VWI1 586 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 LMBRD2Q68DH5 695 aaPredicted RBP5.35□□□□□ -1.55
TCF4-215ENST00000562638 SNRNP48Q6IEG0 339 aaKnown RBP5.35□□□□□ -1.55
TCF4-215ENST00000562638 PHLDB3Q6NSJ2 640 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 TMEM214Q6NUQ4 689 aaKnown RBP5.35□□□□□ -1.55
TCF4-215ENST00000562638 HIBCHQ6NVY1 386 aaPredicted RBP5.35□□□□□ -1.55
TCF4-215ENST00000562638 C8orf74Q6P047 294 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 ZNF449Q6P9G9 518 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 CORO6Q6QEF8 472 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 FASTKD5Q7L8L6 764 aaKnown RBP5.35□□□□□ -1.55
TCF4-215ENST00000562638 LRRTM3Q86VH5 581 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 DDX42Q86XP3 938 aaKnown RBP eCLIP5.35□□□□□ -1.55
TCF4-215ENST00000562638 HOMER1Q86YM7 354 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 TREML1Q86YW5 311 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 PASD1Q8IV76 773 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 HACE1Q8IYU2 909 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 DZIP1LQ8IYY4 767 aaKnown RBP5.35□□□□□ -1.55
TCF4-215ENST00000562638 BBS5Q8N3I7 341 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 CPSF7Q8N684 471 aaKnown RBP5.35□□□□□ -1.55
TCF4-215ENST00000562638 ANKRD53Q8N9V6 530 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 CCDC63Q8NA47 563 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 ARRDC4Q8NCT1 418 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 SCG3Q8WXD2 468 aaKnown RBP5.35□□□□□ -1.55
TCF4-215ENST00000562638 HERVK_113Q902F9 699 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 RPGRQ92834 1020 aaKnown RBP5.35□□□□□ -1.55
TCF4-215ENST00000562638 GATA6Q92908 595 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 WNT2BQ93097 391 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 SH3KBP1Q96B97 665 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 CCDC127Q96BQ5 260 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 DHX58Q96C10 678 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 HAUS1Q96CS2 278 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 CYFIP2Q96F07 1278 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 SPACA7Q96KW9 195 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 SPATA17Q96L03 361 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 PPP1R10Q96QC0 940 aaKnown RBP5.35□□□□□ -1.55
TCF4-215ENST00000562638 MTMR9Q96QG7 549 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 WDR24Q96S15 920 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 SERINC2Q96SA4 455 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 DHRS9Q9BPW9 319 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 FTOQ9C0B1 505 aaKnown RBP eCLIP5.35□□□□□ -1.55
TCF4-215ENST00000562638 CEP44Q9C0F1 390 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 CRISPLD2Q9H0B8 497 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 TRPV6Q9H1D0 765 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 SCPEP1Q9HB40 452 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 VTA1Q9NP79 307 aa5.35□□□□□ -1.55
TCF4-215ENST00000562638 TIMMDC1Q9NPL8 285 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms