RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 STAG3L1P0CL83 205 aa11.75□□□□□ -0.53
BBS4-205ENST00000562219 SCG2P13521 617 aa11.75□□□□□ -0.53
BBS4-205ENST00000562219 RXRAP19793 462 aa11.75□□□□□ -0.53
BBS4-205ENST00000562219 DNAJB1P25685 340 aa11.75□□□□□ -0.53
BBS4-205ENST00000562219 TMEM62Q0P6H9 643 aa11.75□□□□□ -0.53
BBS4-205ENST00000562219 ADAM15Q13444 863 aa11.75□□□□□ -0.53
BBS4-205ENST00000562219 PAN2Q504Q3 1202 aaKnown RBP11.75□□□□□ -0.53
BBS4-205ENST00000562219 RNF135Q8IUD6 432 aa11.75□□□□□ -0.53
BBS4-205ENST00000562219 ZBTB10Q96DT7 871 aa11.75□□□□□ -0.53
BBS4-205ENST00000562219 TMEM87BQ96K49 555 aa11.75□□□□□ -0.53
BBS4-205ENST00000562219 MSLNLQ96KJ4 702 aa11.75□□□□□ -0.53
BBS4-205ENST00000562219 PCYT2Q99447 389 aa11.75□□□□□ -0.53
BBS4-205ENST00000562219 KCNH7Q9NS40 1196 aa11.75□□□□□ -0.53
BBS4-205ENST00000562219 PADI3Q9ULW8 664 aa11.75□□□□□ -0.53
BBS4-205ENST00000562219 PCDHA6Q9UN73 950 aa11.75□□□□□ -0.53
BBS4-205ENST00000562219 PCDHA8Q9Y5H6 950 aa11.75□□□□□ -0.53
BBS4-205ENST00000562219 PCDHA2Q9Y5H9 948 aa11.75□□□□□ -0.53
BBS4-205ENST00000562219 hCG_1642624A0A1W2PR95 340 aa11.74□□□□□ -0.53
BBS4-205ENST00000562219 EYA4O95677 639 aa11.74□□□□□ -0.53
BBS4-205ENST00000562219 LIFRP42702 1097 aa11.74□□□□□ -0.53
BBS4-205ENST00000562219 ACTR2P61160 394 aa11.74□□□□□ -0.53
BBS4-205ENST00000562219 COASYQ13057 564 aa11.74□□□□□ -0.53
BBS4-205ENST00000562219 PLCB4Q15147 1175 aa11.74□□□□□ -0.53
BBS4-205ENST00000562219 TMTC3Q6ZXV5 915 aa11.74□□□□□ -0.53
BBS4-205ENST00000562219 PLPPR4Q7Z2D5 763 aa11.74□□□□□ -0.53
BBS4-205ENST00000562219 HEATR3Q7Z4Q2 680 aa11.74□□□□□ -0.53
BBS4-205ENST00000562219 ADGRD2Q7Z7M1 963 aa11.74□□□□□ -0.53
BBS4-205ENST00000562219 RTN4RL1Q86UN2 441 aaPredicted RBP11.74□□□□□ -0.53
BBS4-205ENST00000562219 EFHBQ8N7U6 833 aa11.74□□□□□ -0.53
BBS4-205ENST00000562219 KLHL23Q8NBE8 558 aa11.74□□□□□ -0.53
BBS4-205ENST00000562219 SMRP1Q8NCR6 262 aa11.74□□□□□ -0.53
BBS4-205ENST00000562219 SPPL3Q8TCT6 385 aa11.74□□□□□ -0.53
BBS4-205ENST00000562219 TRAPPC12Q8WVT3 735 aa11.74□□□□□ -0.53
BBS4-205ENST00000562219 MFSD14AQ96MC6 490 aa11.74□□□□□ -0.53
BBS4-205ENST00000562219 SDF4Q9BRK5 362 aa11.74□□□□□ -0.53
BBS4-205ENST00000562219 CELF4Q9BZC1 486 aaKnown RBP11.74□□□□□ -0.53
BBS4-205ENST00000562219 SLC12A7Q9Y666 1083 aa11.74□□□□□ -0.53
BBS4-205ENST00000562219 NFASCO94856 1347 aa11.74□□□□□ -0.53
BBS4-205ENST00000562219 KDM3AQ9Y4C1 1321 aa11.74□□□□□ -0.53
BBS4-205ENST00000562219 SMIM35A0A1B0GVV1 85 aa11.73□□□□□ -0.53
BBS4-205ENST00000562219 NRIP1P48552 1158 aa11.73□□□□□ -0.53
BBS4-205ENST00000562219 SLC26A2P50443 739 aa11.73□□□□□ -0.53
BBS4-205ENST00000562219 STAT5BP51692 787 aa11.73□□□□□ -0.53
BBS4-205ENST00000562219 KRT76Q01546 638 aa11.73□□□□□ -0.53
BBS4-205ENST00000562219 FAM43BQ6ZT52 329 aaPredicted RBP11.73□□□□□ -0.53
BBS4-205ENST00000562219 TEX2Q8IWB9 1127 aa11.73□□□□□ -0.53
BBS4-205ENST00000562219 NME8Q8N427 588 aa11.73□□□□□ -0.53
BBS4-205ENST00000562219 CCDC82Q8N4S0 544 aa11.73□□□□□ -0.53
BBS4-205ENST00000562219 FANCBQ8NB91 859 aa11.73□□□□□ -0.53
BBS4-205ENST00000562219 POF1BQ8WVV4 589 aa11.73□□□□□ -0.53
BBS4-205ENST00000562219 EDAQ92838 391 aa11.73□□□□□ -0.53
BBS4-205ENST00000562219 MXRA8Q9BRK3 442 aa11.73□□□□□ -0.53
BBS4-205ENST00000562219 TMX1Q9H3N1 280 aa11.73□□□□□ -0.53
BBS4-205ENST00000562219 CLEC1BQ9P126 229 aa11.73□□□□□ -0.53
BBS4-205ENST00000562219 LRFN2Q9ULH4 789 aa11.73□□□□□ -0.53
BBS4-205ENST00000562219 GLP2RO95838 553 aa11.72□□□□□ -0.53
BBS4-205ENST00000562219 SARSP49591 514 aaKnown RBP11.72□□□□□ -0.53
BBS4-205ENST00000562219 GATMP50440 423 aa11.72□□□□□ -0.53
BBS4-205ENST00000562219 COL9A3Q14050 684 aaPredicted RBP11.72□□□□□ -0.53
BBS4-205ENST00000562219 CEP55Q53EZ4 464 aa11.72□□□□□ -0.53
BBS4-205ENST00000562219 PPP1R18Q6NYC8 613 aa11.72□□□□□ -0.53
BBS4-205ENST00000562219 MTHFD1LQ6UB35 978 aa11.72□□□□□ -0.53
BBS4-205ENST00000562219 MICU3Q86XE3 530 aa11.72□□□□□ -0.53
BBS4-205ENST00000562219 RAB11FIP4Q86YS3 637 aa11.72□□□□□ -0.53
BBS4-205ENST00000562219 CYP2W1Q8TAV3 490 aa11.72□□□□□ -0.53
BBS4-205ENST00000562219 RNF216Q9NWF9 866 aaPredicted RBP11.72□□□□□ -0.53
BBS4-205ENST00000562219 BARX2Q9UMQ3 279 aaPredicted RBP11.72□□□□□ -0.53
BBS4-205ENST00000562219 PCDHB7Q9Y5E2 793 aa11.72□□□□□ -0.53
BBS4-205ENST00000562219 ZDBF2Q9HCK1 2354 aa11.72□□□□□ -0.53
BBS4-205ENST00000562219 COL1A2P08123 1366 aa11.71□□□□□ -0.53
BBS4-205ENST00000562219 CNTNAP5Q8WYK1 1306 aa11.71□□□□□ -0.53
BBS4-205ENST00000562219 FSD2A1L4K1 749 aa11.71□□□□□ -0.53
BBS4-205ENST00000562219 SLC27A2O14975 620 aa11.71□□□□□ -0.53
BBS4-205ENST00000562219 FOSP01100 380 aaPredicted RBP11.71□□□□□ -0.53
BBS4-205ENST00000562219 NAPAP54920 295 aa11.71□□□□□ -0.53
BBS4-205ENST00000562219 UBE3AQ05086 875 aa11.71□□□□□ -0.53
BBS4-205ENST00000562219 NFX1Q12986 1120 aaKnown RBP11.71□□□□□ -0.53
BBS4-205ENST00000562219 ITGB3BPQ13352 177 aaPredicted RBP11.71□□□□□ -0.53
BBS4-205ENST00000562219 TMEM266Q2M3C6 531 aa11.71□□□□□ -0.53
BBS4-205ENST00000562219 WWC2Q6AWC2 1192 aa11.71□□□□□ -0.53
BBS4-205ENST00000562219 BMP8AQ7Z5Y6 402 aa11.71□□□□□ -0.53
BBS4-205ENST00000562219 RBM23Q86U06 439 aaKnown RBP11.71□□□□□ -0.53
BBS4-205ENST00000562219 SGMS1Q86VZ5 419 aa11.71□□□□□ -0.53
BBS4-205ENST00000562219 YTHDC1Q96MU7 727 aaKnown RBP11.71□□□□□ -0.53
BBS4-205ENST00000562219 LRRC2Q9BYS8 371 aa11.71□□□□□ -0.53
BBS4-205ENST00000562219 TLE6Q9H808 572 aa11.71□□□□□ -0.53
BBS4-205ENST00000562219 AGO4Q9HCK5 861 aaKnown RBP11.71□□□□□ -0.53
BBS4-205ENST00000562219 ERVK-5Q9HDB9 667 aa11.71□□□□□ -0.53
BBS4-205ENST00000562219 RIC8AQ9NPQ8 531 aa11.71□□□□□ -0.53
BBS4-205ENST00000562219 AAASQ9NRG9 546 aa11.71□□□□□ -0.53
BBS4-205ENST00000562219 C1orf112Q9NSG2 853 aa11.71□□□□□ -0.53
BBS4-205ENST00000562219 USP15Q9Y4E8 981 aaPredicted RBP11.71□□□□□ -0.53
BBS4-205ENST00000562219 PCDHB12Q9Y5F1 795 aa11.71□□□□□ -0.53
BBS4-205ENST00000562219 PCDHGC5Q9Y5F6 944 aa11.71□□□□□ -0.53
BBS4-205ENST00000562219 IGKV6D-21A0A0A0MT36 114 aa11.7□□□□□ -0.54
BBS4-205ENST00000562219 DENND3A2RUS2 1198 aa11.7□□□□□ -0.54
BBS4-205ENST00000562219 TMEM221A6NGB7 291 aa11.7□□□□□ -0.54
BBS4-205ENST00000562219 LOC730098B7Z3J9 87 aa11.7□□□□□ -0.54
BBS4-205ENST00000562219 M0R296 226 aa11.7□□□□□ -0.54
BBS4-205ENST00000562219 MGEA5O60502 916 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms