RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 KIF28PB7ZC32 967 aa26.95■■□□□ 1.9
CDR2-202ENST00000561630 ATP4AP20648 1035 aa26.95■■□□□ 1.9
CDR2-202ENST00000561630 DEFB103AP81534 67 aa26.95■■□□□ 1.9
CDR2-202ENST00000561630 MGAT3Q09327 533 aa26.95■■□□□ 1.9
CDR2-202ENST00000561630 MKRN4PQ13434 485 aaPredicted RBP26.95■■□□□ 1.9
CDR2-202ENST00000561630 PPP2R2DQ66LE6 453 aa26.95■■□□□ 1.9
CDR2-202ENST00000561630 OXER1Q8TDS5 423 aa26.95■■□□□ 1.9
CDR2-202ENST00000561630 PCDHA2Q9Y5H9 948 aa26.95■■□□□ 1.9
CDR2-202ENST00000561630 GAS7O60861 476 aa26.94■■□□□ 1.9
CDR2-202ENST00000561630 ST3GAL1Q11201 340 aa26.94■■□□□ 1.9
CDR2-202ENST00000561630 LRCH2Q5VUJ6 765 aa26.94■■□□□ 1.9
CDR2-202ENST00000561630 DISC1Q9NRI5 854 aa26.94■■□□□ 1.9
CDR2-202ENST00000561630 SAMM50Q9Y512 469 aa26.94■■□□□ 1.9
CDR2-202ENST00000561630 JAK2O60674 1132 aa26.93■■□□□ 1.9
CDR2-202ENST00000561630 PSMD10O75832 226 aa26.93■■□□□ 1.9
CDR2-202ENST00000561630 CA3P07451 260 aa26.93■■□□□ 1.9
CDR2-202ENST00000561630 FOSL2P15408 326 aa26.93■■□□□ 1.9
CDR2-202ENST00000561630 RBM25P49756 843 aaKnown RBP26.93■■□□□ 1.9
CDR2-202ENST00000561630 MTHFD1LQ6UB35 978 aa26.93■■□□□ 1.9
CDR2-202ENST00000561630 ETNPPLQ8TBG4 499 aa26.93■■□□□ 1.9
CDR2-202ENST00000561630 APBB2Q92870 758 aa26.93■■□□□ 1.9
CDR2-202ENST00000561630 GJA10Q969M2 543 aa26.93■■□□□ 1.9
CDR2-202ENST00000561630 TEKT3Q9BXF9 490 aa26.93■■□□□ 1.9
CDR2-202ENST00000561630 FAM49AQ9H0Q0 323 aaPredicted RBP26.93■■□□□ 1.9
CDR2-202ENST00000561630 GABBR1Q9UBS5 961 aa26.93■■□□□ 1.9
CDR2-202ENST00000561630 DDX25Q9UHL0 483 aaKnown RBP26.93■■□□□ 1.9
CDR2-202ENST00000561630 SMIM35A0A1B0GVV1 85 aa26.92■■□□□ 1.9
CDR2-202ENST00000561630 SFNP31947 248 aa26.92■■□□□ 1.9
CDR2-202ENST00000561630 MRPS6P82932 125 aaKnown RBP26.92■■□□□ 1.9
CDR2-202ENST00000561630 LETM2Q2VYF4 491 aa26.92■■□□□ 1.9
CDR2-202ENST00000561630 ZNF484Q5JVG2 852 aa26.92■■□□□ 1.9
CDR2-202ENST00000561630 PIK3AP1Q6ZUJ8 805 aa26.92■■□□□ 1.9
CDR2-202ENST00000561630 TMCO2Q7Z6W1 182 aaPredicted RBP26.92■■□□□ 1.9
CDR2-202ENST00000561630 NEK8Q86SG6 692 aa26.92■■□□□ 1.9
CDR2-202ENST00000561630 CKAP2LQ8IYA6 745 aa26.92■■□□□ 1.9
CDR2-202ENST00000561630 BBXQ8WY36 941 aaPredicted RBP26.92■■□□□ 1.9
CDR2-202ENST00000561630 IFIH1Q9BYX4 1025 aaKnown RBP26.92■■□□□ 1.9
CDR2-202ENST00000561630 UNC45AQ9H3U1 944 aa26.92■■□□□ 1.9
CDR2-202ENST00000561630 PRDM12Q9H4Q4 367 aa26.92■■□□□ 1.9
CDR2-202ENST00000561630 COL1A2P08123 1366 aa26.92■■□□□ 1.9
CDR2-202ENST00000561630 IGSF9BQ9UPX0 1349 aa26.91■■□□□ 1.9
CDR2-202ENST00000561630 ZBTB42B2RXF5 422 aa26.91■■□□□ 1.9
CDR2-202ENST00000561630 TLL1O43897 1013 aa26.91■■□□□ 1.9
CDR2-202ENST00000561630 GJB5O95377 273 aa26.91■■□□□ 1.9
CDR2-202ENST00000561630 KLRC1P26715 233 aa26.91■■□□□ 1.9
CDR2-202ENST00000561630 JAK3P52333 1124 aa26.91■■□□□ 1.9
CDR2-202ENST00000561630 IER5Q5VY09 327 aa26.91■■□□□ 1.9
CDR2-202ENST00000561630 PPP4R3AQ6IN85 833 aa26.91■■□□□ 1.9
CDR2-202ENST00000561630 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.91■■□□□ 1.9
CDR2-202ENST00000561630 BRMS1Q9HCU9 246 aa26.91■■□□□ 1.9
CDR2-202ENST00000561630 CDY2AQ9Y6F7 541 aa26.91■■□□□ 1.9
CDR2-202ENST00000561630 CHMP2AO43633 222 aa26.9■■□□□ 1.9
CDR2-202ENST00000561630 SLC37A4O43826 429 aa26.9■■□□□ 1.9
CDR2-202ENST00000561630 GHRP10912 638 aa26.9■■□□□ 1.9
CDR2-202ENST00000561630 GCFC2P16383 781 aaKnown RBP26.9■■□□□ 1.9
CDR2-202ENST00000561630 KRT2P35908 639 aa26.9■■□□□ 1.9
CDR2-202ENST00000561630 LPIN1Q14693 890 aa26.9■■□□□ 1.9
CDR2-202ENST00000561630 B3GNT9Q6UX72 402 aa26.9■■□□□ 1.9
CDR2-202ENST00000561630 NME8Q8N427 588 aa26.9■■□□□ 1.9
CDR2-202ENST00000561630 RDM1Q8NG50 284 aa26.9■■□□□ 1.9
CDR2-202ENST00000561630 TNFRSF25Q93038 417 aa26.9■■□□□ 1.9
CDR2-202ENST00000561630 ZBED2Q9BTP6 218 aa26.9■■□□□ 1.9
CDR2-202ENST00000561630 AMHP03971 560 aa26.89■■□□□ 1.9
CDR2-202ENST00000561630 NR5A1Q13285 461 aa26.89■■□□□ 1.9
CDR2-202ENST00000561630 EARS2Q5JPH6 523 aaKnown RBP26.89■■□□□ 1.9
CDR2-202ENST00000561630 FBXO47Q5MNV8 452 aa26.89■■□□□ 1.9
CDR2-202ENST00000561630 MAFAQ8NHW3 353 aaPredicted RBP26.89■■□□□ 1.9
CDR2-202ENST00000561630 FAM167AQ96KS9 214 aa26.89■■□□□ 1.9
CDR2-202ENST00000561630 ZSCAN31Q96LW9 406 aaPredicted RBP26.89■■□□□ 1.9
CDR2-202ENST00000561630 GAS2L1Q99501 681 aaPredicted RBP26.89■■□□□ 1.9
CDR2-202ENST00000561630 RAD9AQ99638 391 aa26.89■■□□□ 1.9
CDR2-202ENST00000561630 NAP1L4Q99733 375 aaKnown RBP26.89■■□□□ 1.9
CDR2-202ENST00000561630 TRANK1O15050 2925 aa26.88■■□□□ 1.89
CDR2-202ENST00000561630 ZNF862O60290 1169 aa26.88■■□□□ 1.89
CDR2-202ENST00000561630 MMP1P03956 469 aa26.88■■□□□ 1.89
CDR2-202ENST00000561630 TAP1Q03518 808 aa26.88■■□□□ 1.89
CDR2-202ENST00000561630 LLPHQ9BRT6 129 aaKnown RBP26.88■■□□□ 1.89
CDR2-202ENST00000561630 KCNMB3Q9NPA1 279 aa26.88■■□□□ 1.89
CDR2-202ENST00000561630 SQORQ9Y6N5 450 aa26.88■■□□□ 1.89
CDR2-202ENST00000561630 KAT6AQ92794 2004 aa26.88■■□□□ 1.89
CDR2-202ENST00000561630 PRUNE2Q8WUY3 3088 aa26.88■■□□□ 1.89
CDR2-202ENST00000561630 UNC80Q8N2C7 3258 aa26.87■■□□□ 1.89
CDR2-202ENST00000561630 M0QZ92 97 aa26.87■■□□□ 1.89
CDR2-202ENST00000561630 CCNT1O60563 726 aaKnown RBP26.87■■□□□ 1.89
CDR2-202ENST00000561630 ARHGEF15O94989 841 aa26.87■■□□□ 1.89
CDR2-202ENST00000561630 TRIM29Q14134 588 aa26.87■■□□□ 1.89
CDR2-202ENST00000561630 KRT40Q6A162 431 aa26.87■■□□□ 1.89
CDR2-202ENST00000561630 TSHZ1Q6ZSZ6 1077 aa26.87■■□□□ 1.89
CDR2-202ENST00000561630 MIER3Q7Z3K6 550 aa26.87■■□□□ 1.89
CDR2-202ENST00000561630 CCDC83Q8IWF9 413 aa26.87■■□□□ 1.89
CDR2-202ENST00000561630 KIAA0319LQ8IZA0 1049 aa26.87■■□□□ 1.89
CDR2-202ENST00000561630 MYOCDQ8IZQ8 938 aa26.87■■□□□ 1.89
CDR2-202ENST00000561630 FAM20AQ96MK3 541 aa26.87■■□□□ 1.89
CDR2-202ENST00000561630 CEP131Q9UPN4 1083 aa26.87■■□□□ 1.89
CDR2-202ENST00000561630 TRPV2Q9Y5S1 764 aa26.87■■□□□ 1.89
CDR2-202ENST00000561630 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.86■■□□□ 1.89
CDR2-202ENST00000561630 LCHNA4D1U4 455 aa26.86■■□□□ 1.89
CDR2-202ENST00000561630 FAM205CA6NFA0 338 aa26.86■■□□□ 1.89
CDR2-202ENST00000561630 C22orf31O95567 290 aa26.86■■□□□ 1.89
CDR2-202ENST00000561630 TMEM62Q0P6H9 643 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms