RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 CALCRLQ16602 461 aa22.45■■□□□ 1.18
TSPAN3-210ENST00000561277 UGCGQ16739 394 aa22.45■■□□□ 1.18
TSPAN3-210ENST00000561277 TRAF7Q6Q0C0 670 aa22.45■■□□□ 1.18
TSPAN3-210ENST00000561277 NOSTRINQ8IVI9 506 aa22.45■■□□□ 1.18
TSPAN3-210ENST00000561277 VAV3Q9UKW4 847 aa22.45■■□□□ 1.18
TSPAN3-210ENST00000561277 MYH9P35579 1960 aaKnown RBP22.44■■□□□ 1.18
TSPAN3-210ENST00000561277 MBLAC1A4D2B0 266 aaPredicted RBP22.44■■□□□ 1.18
TSPAN3-210ENST00000561277 RSPH10B2B2RC85 870 aa22.44■■□□□ 1.18
TSPAN3-210ENST00000561277 BAG4O95429 457 aaKnown RBP22.44■■□□□ 1.18
TSPAN3-210ENST00000561277 RSPH10BP0C881 870 aa22.44■■□□□ 1.18
TSPAN3-210ENST00000561277 TAF2Q6P1X5 1199 aa22.44■■□□□ 1.18
TSPAN3-210ENST00000561277 B3GNT9Q6UX72 402 aa22.44■■□□□ 1.18
TSPAN3-210ENST00000561277 ZBBXA8MT70 800 aa22.43■■□□□ 1.18
TSPAN3-210ENST00000561277 ZNF862O60290 1169 aa22.43■■□□□ 1.18
TSPAN3-210ENST00000561277 NBNO60934 754 aa22.43■■□□□ 1.18
TSPAN3-210ENST00000561277 MCM7P33993 719 aa22.43■■□□□ 1.18
TSPAN3-210ENST00000561277 GPNMBQ14956 572 aa22.43■■□□□ 1.18
TSPAN3-210ENST00000561277 MCTP1Q6DN14 999 aa22.43■■□□□ 1.18
TSPAN3-210ENST00000561277 SLFN12Q8IYM2 578 aa22.43■■□□□ 1.18
TSPAN3-210ENST00000561277 RDM1Q8NG50 284 aa22.43■■□□□ 1.18
TSPAN3-210ENST00000561277 DNAJB3Q8WWF6 145 aa22.43■■□□□ 1.18
TSPAN3-210ENST00000561277 FAM49AQ9H0Q0 323 aaPredicted RBP22.43■■□□□ 1.18
TSPAN3-210ENST00000561277 CXXC1Q9P0U4 656 aaPredicted RBP22.43■■□□□ 1.18
TSPAN3-210ENST00000561277 H3BQV1 296 aa22.42■■□□□ 1.18
TSPAN3-210ENST00000561277 EML1O00423 815 aa22.42■■□□□ 1.18
TSPAN3-210ENST00000561277 PRKCEQ02156 737 aa22.42■■□□□ 1.18
TSPAN3-210ENST00000561277 PPP2R5CQ13362 524 aa22.42■■□□□ 1.18
TSPAN3-210ENST00000561277 CUL4AQ13619 759 aa22.42■■□□□ 1.18
TSPAN3-210ENST00000561277 MBTPS1Q14703 1052 aa22.42■■□□□ 1.18
TSPAN3-210ENST00000561277 NCAPH2Q6IBW4 605 aa22.42■■□□□ 1.18
TSPAN3-210ENST00000561277 BBXQ8WY36 941 aaPredicted RBP22.42■■□□□ 1.18
TSPAN3-210ENST00000561277 HERVK_113Q902F9 699 aa22.42■■□□□ 1.18
TSPAN3-210ENST00000561277 MTIF3Q9H2K0 278 aaKnown RBP22.42■■□□□ 1.18
TSPAN3-210ENST00000561277 WDR81Q562E7 1941 aa22.42■■□□□ 1.18
TSPAN3-210ENST00000561277 CAND2O75155 1236 aa22.42■■□□□ 1.18
TSPAN3-210ENST00000561277 PARNO95453 639 aaKnown RBP22.42■■□□□ 1.18
TSPAN3-210ENST00000561277 OATP04181 439 aa22.42■■□□□ 1.18
TSPAN3-210ENST00000561277 MTHFD1LQ6UB35 978 aa22.42■■□□□ 1.18
TSPAN3-210ENST00000561277 RSPH3Q86UC2 560 aa22.42■■□□□ 1.18
TSPAN3-210ENST00000561277 BANK1Q8NDB2 785 aa22.42■■□□□ 1.18
TSPAN3-210ENST00000561277 TET1Q8NFU7 2136 aa22.41■■□□□ 1.18
TSPAN3-210ENST00000561277 ACTN1P12814 892 aa22.41■■□□□ 1.18
TSPAN3-210ENST00000561277 U2AF2P26368 475 aaKnown RBP eCLIP22.41■■□□□ 1.18
TSPAN3-210ENST00000561277 KLRC1P26715 233 aa22.41■■□□□ 1.18
TSPAN3-210ENST00000561277 RASIP1Q5U651 963 aa22.41■■□□□ 1.18
TSPAN3-210ENST00000561277 FAM167AQ96KS9 214 aa22.41■■□□□ 1.18
TSPAN3-210ENST00000561277 NOL7Q9UMY1 257 aaKnown RBP22.41■■□□□ 1.18
TSPAN3-210ENST00000561277 COL1A2P08123 1366 aa22.41■■□□□ 1.18
TSPAN3-210ENST00000561277 ZBTB42B2RXF5 422 aa22.4■■□□□ 1.18
TSPAN3-210ENST00000561277 TXKP42681 527 aa22.4■■□□□ 1.18
TSPAN3-210ENST00000561277 NBR1Q14596 966 aa22.4■■□□□ 1.18
TSPAN3-210ENST00000561277 ZNF174Q15697 407 aa22.4■■□□□ 1.18
TSPAN3-210ENST00000561277 ZNF484Q5JVG2 852 aa22.4■■□□□ 1.18
TSPAN3-210ENST00000561277 TTC38Q5R3I4 469 aa22.4■■□□□ 1.18
TSPAN3-210ENST00000561277 FAM109BQ6ICB4 259 aaPredicted RBP22.4■■□□□ 1.18
TSPAN3-210ENST00000561277 TMEM60Q9H2L4 133 aa22.4■■□□□ 1.18
TSPAN3-210ENST00000561277 PCDHA2Q9Y5H9 948 aa22.4■■□□□ 1.18
TSPAN3-210ENST00000561277 K7ELQ4 463 aaPredicted RBP22.39■■□□□ 1.18
TSPAN3-210ENST00000561277 CXCL10P02778 98 aa22.39■■□□□ 1.18
TSPAN3-210ENST00000561277 SPIRE1Q08AE8 756 aa22.39■■□□□ 1.18
TSPAN3-210ENST00000561277 LARP1BQ659C4 914 aaKnown RBP22.39■■□□□ 1.18
TSPAN3-210ENST00000561277 TTC12Q9H892 705 aaPredicted RBP22.39■■□□□ 1.18
TSPAN3-210ENST00000561277 SEPT9Q9UHD8 586 aaPredicted RBP22.39■■□□□ 1.18
TSPAN3-210ENST00000561277 PCDHA12Q9UN75 941 aa22.39■■□□□ 1.18
TSPAN3-210ENST00000561277 CEP131Q9UPN4 1083 aa22.39■■□□□ 1.18
TSPAN3-210ENST00000561277 TMEM62Q0P6H9 643 aa22.38■■□□□ 1.17
TSPAN3-210ENST00000561277 RPAINQ86UA6 219 aa22.38■■□□□ 1.17
TSPAN3-210ENST00000561277 OSBPL7Q9BZF2 842 aa22.38■■□□□ 1.17
TSPAN3-210ENST00000561277 NRBP2Q9NSY0 501 aa22.38■■□□□ 1.17
TSPAN3-210ENST00000561277 FOXD4L1Q9NU39 408 aa22.38■■□□□ 1.17
TSPAN3-210ENST00000561277 SMIM35A0A1B0GVV1 85 aa22.38■■□□□ 1.17
TSPAN3-210ENST00000561277 TMEM150BA6NC51 233 aa22.38■■□□□ 1.17
TSPAN3-210ENST00000561277 GRXCR1A8MXD5 290 aa22.38■■□□□ 1.17
TSPAN3-210ENST00000561277 CHRNA1P02708 482 aa22.38■■□□□ 1.17
TSPAN3-210ENST00000561277 PSMC5P62195 406 aa22.38■■□□□ 1.17
TSPAN3-210ENST00000561277 TCTN1Q2MV58 587 aa22.38■■□□□ 1.17
TSPAN3-210ENST00000561277 CNKSR3Q6P9H4 555 aa22.38■■□□□ 1.17
TSPAN3-210ENST00000561277 MTMR9Q96QG7 549 aa22.38■■□□□ 1.17
TSPAN3-210ENST00000561277 CDY2AQ9Y6F7 541 aa22.38■■□□□ 1.17
TSPAN3-210ENST00000561277 SLC4A7Q9Y6M7 1214 aa22.38■■□□□ 1.17
TSPAN3-210ENST00000561277 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.37■■□□□ 1.17
TSPAN3-210ENST00000561277 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.37■■□□□ 1.17
TSPAN3-210ENST00000561277 C22orf31O95567 290 aa22.37■■□□□ 1.17
TSPAN3-210ENST00000561277 TRAPPC10P48553 1259 aa22.37■■□□□ 1.17
TSPAN3-210ENST00000561277 MRPS6P82932 125 aaKnown RBP22.37■■□□□ 1.17
TSPAN3-210ENST00000561277 SMAD3P84022 425 aaKnown RBP22.37■■□□□ 1.17
TSPAN3-210ENST00000561277 CYP4A11Q02928 519 aa22.37■■□□□ 1.17
TSPAN3-210ENST00000561277 MGAT3Q09327 533 aa22.37■■□□□ 1.17
TSPAN3-210ENST00000561277 FAM26DQ5JW98 314 aa22.37■■□□□ 1.17
TSPAN3-210ENST00000561277 METTL13Q8N6R0 699 aa22.37■■□□□ 1.17
TSPAN3-210ENST00000561277 SH2D3AQ9BRG2 576 aa22.37■■□□□ 1.17
TSPAN3-210ENST00000561277 SIP14410 1827 aa22.36■■□□□ 1.17
TSPAN3-210ENST00000561277 GHRP10912 638 aa22.36■■□□□ 1.17
TSPAN3-210ENST00000561277 QARSP47897 775 aaKnown RBP22.36■■□□□ 1.17
TSPAN3-210ENST00000561277 ORC2Q13416 577 aaPredicted RBP22.36■■□□□ 1.17
TSPAN3-210ENST00000561277 EPHA7Q15375 998 aa22.36■■□□□ 1.17
TSPAN3-210ENST00000561277 MTERF2Q49AM1 385 aa22.36■■□□□ 1.17
TSPAN3-210ENST00000561277 XKR3Q5GH77 459 aa22.36■■□□□ 1.17
TSPAN3-210ENST00000561277 DYDC2Q96IM9 177 aa22.36■■□□□ 1.17
TSPAN3-210ENST00000561277 RGL1Q9NZL6 768 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms