RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 KRT79Q5XKE5 535 aa11.53□□□□□ -0.56
LRRC28-221ENST00000561276 POTEBQ6S5H4 581 aa11.53□□□□□ -0.56
LRRC28-221ENST00000561276 UBE2Q1Q7Z7E8 422 aa11.53□□□□□ -0.56
LRRC28-221ENST00000561276 CATSPER3Q86XQ3 398 aa11.53□□□□□ -0.56
LRRC28-221ENST00000561276 CKAP2LQ8IYA6 745 aa11.53□□□□□ -0.56
LRRC28-221ENST00000561276 C7orf31Q8N865 590 aa11.53□□□□□ -0.56
LRRC28-221ENST00000561276 ERMNQ8TAM6 284 aa11.53□□□□□ -0.56
LRRC28-221ENST00000561276 KCNG4Q8TDN1 519 aa11.53□□□□□ -0.56
LRRC28-221ENST00000561276 LEO1Q8WVC0 666 aaPredicted RBP11.53□□□□□ -0.56
LRRC28-221ENST00000561276 AK8Q96MA6 479 aa11.53□□□□□ -0.56
LRRC28-221ENST00000561276 MMTAG2Q9BU76 263 aaKnown RBP11.53□□□□□ -0.56
LRRC28-221ENST00000561276 POLR3CQ9BUI4 534 aaPredicted RBP11.53□□□□□ -0.56
LRRC28-221ENST00000561276 CSRNP2Q9H175 543 aa11.53□□□□□ -0.56
LRRC28-221ENST00000561276 NRBP2Q9NSY0 501 aa11.53□□□□□ -0.56
LRRC28-221ENST00000561276 WRAP73Q9P2S5 460 aaPredicted RBP11.53□□□□□ -0.56
LRRC28-221ENST00000561276 HDAC6Q9UBN7 1215 aa11.53□□□□□ -0.56
LRRC28-221ENST00000561276 PCDHA7Q9UN72 937 aa11.53□□□□□ -0.56
LRRC28-221ENST00000561276 STK24Q9Y6E0 443 aa11.53□□□□□ -0.56
LRRC28-221ENST00000561276 ARID2Q68CP9 1835 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 A0A087WWV3 80 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 A0A0U1RQG5 324 aaPredicted RBP11.52□□□□□ -0.57
LRRC28-221ENST00000561276 DDX11L8A8MPP1 907 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 ARVCFO00192 962 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 ZBTB39O15060 712 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 ZNF862O60290 1169 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 DKC1O60832 514 aaKnown RBP eCLIP11.52□□□□□ -0.57
LRRC28-221ENST00000561276 CUTAO60888 179 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 MED24O75448 989 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 STBD1O95210 358 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 CCT6AP40227 531 aaKnown RBP11.52□□□□□ -0.57
LRRC28-221ENST00000561276 UBA7P41226 1012 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 CDK7P50613 346 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 FAM47CQ5HY64 1035 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 NFRKBQ6P4R8 1299 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 C4orf19Q8IY42 314 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 SLC43A3Q8NBI5 491 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 NEK9Q8TD19 979 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 BBXQ8WY36 941 aaPredicted RBP11.52□□□□□ -0.57
LRRC28-221ENST00000561276 ATP6V0A1Q93050 837 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 EPSTI1Q96J88 318 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 LXNQ9BS40 222 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 ZSWIM4Q9H7M6 989 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 GDPD2Q9HCC8 539 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 TUFT1Q9NNX1 390 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 DNAH12Q6ZR08 3092 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 IGSF9BQ9UPX0 1349 aa11.52□□□□□ -0.57
LRRC28-221ENST00000561276 LOXHD1Q8IVV2 1947 aa11.51□□□□□ -0.57
LRRC28-221ENST00000561276 HBP1O60381 514 aa11.51□□□□□ -0.57
LRRC28-221ENST00000561276 OATP04181 439 aa11.51□□□□□ -0.57
LRRC28-221ENST00000561276 SMIM10L2AP0DMW4 78 aa11.51□□□□□ -0.57
LRRC28-221ENST00000561276 SMIM10L2BP0DMW5 78 aa11.51□□□□□ -0.57
LRRC28-221ENST00000561276 INSRRP14616 1297 aa11.51□□□□□ -0.57
LRRC28-221ENST00000561276 PRKCEQ02156 737 aa11.51□□□□□ -0.57
LRRC28-221ENST00000561276 PTPN11Q06124 597 aaPredicted RBP11.51□□□□□ -0.57
LRRC28-221ENST00000561276 ECM1Q16610 540 aa11.51□□□□□ -0.57
LRRC28-221ENST00000561276 XKR3Q5GH77 459 aa11.51□□□□□ -0.57
LRRC28-221ENST00000561276 AXDND1Q5T1B0 1012 aaPredicted RBP11.51□□□□□ -0.57
LRRC28-221ENST00000561276 C1orf53Q5VUE5 145 aa11.51□□□□□ -0.57
LRRC28-221ENST00000561276 HAUS3Q68CZ6 603 aa11.51□□□□□ -0.57
LRRC28-221ENST00000561276 ADALQ6DHV7 355 aa11.51□□□□□ -0.57
LRRC28-221ENST00000561276 USP49Q70CQ1 688 aa11.51□□□□□ -0.57
LRRC28-221ENST00000561276 CABP7Q86V35 215 aa11.51□□□□□ -0.57
LRRC28-221ENST00000561276 ZNF579Q8NAF0 562 aaKnown RBP11.51□□□□□ -0.57
LRRC28-221ENST00000561276 SNX29Q8TEQ0 813 aa11.51□□□□□ -0.57
LRRC28-221ENST00000561276 ATP8B4Q8TF62 1192 aa11.51□□□□□ -0.57
LRRC28-221ENST00000561276 NIFKQ9BYG3 293 aaKnown RBP11.51□□□□□ -0.57
LRRC28-221ENST00000561276 SEZ6LQ9BYH1 1024 aa11.51□□□□□ -0.57
LRRC28-221ENST00000561276 CCSER1Q9C0I3 900 aa11.51□□□□□ -0.57
LRRC28-221ENST00000561276 SETD4Q9NVD3 440 aa11.51□□□□□ -0.57
LRRC28-221ENST00000561276 TRPC6Q9Y210 931 aa11.51□□□□□ -0.57
LRRC28-221ENST00000561276 EVPLQ92817 2033 aa11.51□□□□□ -0.57
LRRC28-221ENST00000561276 KIAA0100Q14667 2235 aaKnown RBP11.51□□□□□ -0.57
LRRC28-221ENST00000561276 ALPK3Q96L96 1907 aa11.5□□□□□ -0.57
LRRC28-221ENST00000561276 TMEM150BA6NC51 233 aa11.5□□□□□ -0.57
LRRC28-221ENST00000561276 LYPLA2O95372 231 aa11.5□□□□□ -0.57
LRRC28-221ENST00000561276 XRCC6P12956 609 aaKnown RBP eCLIP11.5□□□□□ -0.57
LRRC28-221ENST00000561276 MUTP22033 750 aa11.5□□□□□ -0.57
LRRC28-221ENST00000561276 YWHABP31946 246 aaKnown RBP11.5□□□□□ -0.57
LRRC28-221ENST00000561276 IGBP1P78318 339 aa11.5□□□□□ -0.57
LRRC28-221ENST00000561276 HIC1Q14526 733 aa11.5□□□□□ -0.57
LRRC28-221ENST00000561276 ZRSR1Q15695 479 aaKnown RBP11.5□□□□□ -0.57
LRRC28-221ENST00000561276 LRRC26Q2I0M4 334 aa11.5□□□□□ -0.57
LRRC28-221ENST00000561276 ZNF484Q5JVG2 852 aa11.5□□□□□ -0.57
LRRC28-221ENST00000561276 GDF6Q6KF10 455 aaPredicted RBP11.5□□□□□ -0.57
LRRC28-221ENST00000561276 ANO5Q75V66 913 aa11.5□□□□□ -0.57
LRRC28-221ENST00000561276 OTUD6AQ7L8S5 288 aa11.5□□□□□ -0.57
LRRC28-221ENST00000561276 SESTD1Q86VW0 696 aa11.5□□□□□ -0.57
LRRC28-221ENST00000561276 PIGOQ8TEQ8 1089 aa11.5□□□□□ -0.57
LRRC28-221ENST00000561276 TRAPPC12Q8WVT3 735 aa11.5□□□□□ -0.57
LRRC28-221ENST00000561276 SYMPKQ92797 1274 aaKnown RBP11.5□□□□□ -0.57
LRRC28-221ENST00000561276 CALML4Q96GE6 196 aa11.5□□□□□ -0.57
LRRC28-221ENST00000561276 FAM167AQ96KS9 214 aa11.5□□□□□ -0.57
LRRC28-221ENST00000561276 NACC1Q96RE7 527 aa11.5□□□□□ -0.57
LRRC28-221ENST00000561276 PLIN2Q99541 437 aa11.5□□□□□ -0.57
LRRC28-221ENST00000561276 SH2D3AQ9BRG2 576 aa11.5□□□□□ -0.57
LRRC28-221ENST00000561276 PANK2Q9BZ23 570 aa11.5□□□□□ -0.57
LRRC28-221ENST00000561276 NT5C3AQ9H0P0 336 aa11.5□□□□□ -0.57
LRRC28-221ENST00000561276 GTF2IRD1Q9UHL9 959 aa11.5□□□□□ -0.57
LRRC28-221ENST00000561276 KIAA1024Q9UPX6 916 aa11.5□□□□□ -0.57
LRRC28-221ENST00000561276 NRCAMQ92823 1304 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms