RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 KIAA1217Q5T5P2 1943 aa18.96■□□□□ 0.63
HDDC3-206ENST00000561036 STRNO43815 780 aa18.96■□□□□ 0.63
HDDC3-206ENST00000561036 ZNF500O60304 480 aaPredicted RBP18.96■□□□□ 0.63
HDDC3-206ENST00000561036 COBLO75128 1261 aa18.96■□□□□ 0.63
HDDC3-206ENST00000561036 TPM2P07951 284 aa18.96■□□□□ 0.63
HDDC3-206ENST00000561036 YWHABP31946 246 aaKnown RBP18.96■□□□□ 0.63
HDDC3-206ENST00000561036 RARRES1P49788 294 aa18.96■□□□□ 0.63
HDDC3-206ENST00000561036 HUNKP57058 714 aa18.96■□□□□ 0.63
HDDC3-206ENST00000561036 CACNB1Q02641 598 aaPredicted RBP18.96■□□□□ 0.63
HDDC3-206ENST00000561036 ZCWPW2Q504Y3 356 aa18.96■□□□□ 0.63
HDDC3-206ENST00000561036 MIS18BP1Q6P0N0 1132 aa18.96■□□□□ 0.63
HDDC3-206ENST00000561036 PADI6Q6TGC4 694 aa18.96■□□□□ 0.63
HDDC3-206ENST00000561036 ABHD15Q6UXT9 468 aa18.96■□□□□ 0.63
HDDC3-206ENST00000561036 STXBP4Q6ZWJ1 553 aa18.96■□□□□ 0.63
HDDC3-206ENST00000561036 OTUD6AQ7L8S5 288 aa18.96■□□□□ 0.63
HDDC3-206ENST00000561036 LRRC8AQ8IWT6 810 aa18.96■□□□□ 0.63
HDDC3-206ENST00000561036 SCFD1Q8WVM8 642 aa18.96■□□□□ 0.63
HDDC3-206ENST00000561036 UBE4BO95155 1302 aa18.96■□□□□ 0.63
HDDC3-206ENST00000561036 ASB14A6NK59 587 aa18.95■□□□□ 0.62
HDDC3-206ENST00000561036 N4BP3O15049 544 aa18.95■□□□□ 0.62
HDDC3-206ENST00000561036 ZBTB39O15060 712 aa18.95■□□□□ 0.62
HDDC3-206ENST00000561036 EIF3DO15371 548 aaKnown RBP eCLIP18.95■□□□□ 0.62
HDDC3-206ENST00000561036 ATG7O95352 703 aa18.95■□□□□ 0.62
HDDC3-206ENST00000561036 PBX1P40424 430 aa18.95■□□□□ 0.62
HDDC3-206ENST00000561036 ACTR2P61160 394 aa18.95■□□□□ 0.62
HDDC3-206ENST00000561036 TBX2Q13207 712 aaPredicted RBP18.95■□□□□ 0.62
HDDC3-206ENST00000561036 NEDD9Q14511 834 aa18.95■□□□□ 0.62
HDDC3-206ENST00000561036 LRRC41Q15345 812 aa18.95■□□□□ 0.62
HDDC3-206ENST00000561036 EDRF1Q3B7T1 1238 aa18.95■□□□□ 0.62
HDDC3-206ENST00000561036 SEPT14Q6ZU15 432 aa18.95■□□□□ 0.62
HDDC3-206ENST00000561036 CACTINQ8WUQ7 758 aaKnown RBP18.95■□□□□ 0.62
HDDC3-206ENST00000561036 FGD4Q96M96 766 aa18.95■□□□□ 0.62
HDDC3-206ENST00000561036 CEP63Q96MT8 703 aa18.95■□□□□ 0.62
HDDC3-206ENST00000561036 CCDC43Q96MW1 224 aaKnown RBP18.95■□□□□ 0.62
HDDC3-206ENST00000561036 ZNF830Q96NB3 372 aaPredicted RBP18.95■□□□□ 0.62
HDDC3-206ENST00000561036 ITIH6Q6UXX5 1313 aa18.95■□□□□ 0.62
HDDC3-206ENST00000561036 MANSC4A6NHS7 340 aaPredicted RBP18.94■□□□□ 0.62
HDDC3-206ENST00000561036 GNA14O95837 355 aa18.94■□□□□ 0.62
HDDC3-206ENST00000561036 SUPT20HL2P0C7V6 817 aa18.94■□□□□ 0.62
HDDC3-206ENST00000561036 MAPTP10636 758 aaKnown RBP18.94■□□□□ 0.62
HDDC3-206ENST00000561036 FKBP3Q00688 224 aaKnown RBP18.94■□□□□ 0.62
HDDC3-206ENST00000561036 FSTL1Q12841 308 aa18.94■□□□□ 0.62
HDDC3-206ENST00000561036 MKRN3Q13064 507 aaKnown RBP18.94■□□□□ 0.62
HDDC3-206ENST00000561036 ZC3H3Q8IXZ2 948 aaKnown RBP18.94■□□□□ 0.62
HDDC3-206ENST00000561036 MYCT1Q8N699 235 aa18.94■□□□□ 0.62
HDDC3-206ENST00000561036 GLIS3Q8NEA6 775 aa18.94■□□□□ 0.62
HDDC3-206ENST00000561036 ZNF507Q8TCN5 953 aa18.94■□□□□ 0.62
HDDC3-206ENST00000561036 PORCNQ9H237 461 aa18.94■□□□□ 0.62
HDDC3-206ENST00000561036 KCTD10Q9H3F6 313 aa18.94■□□□□ 0.62
HDDC3-206ENST00000561036 MRPL44Q9H9J2 332 aaKnown RBP18.94■□□□□ 0.62
HDDC3-206ENST00000561036 TBC1D7Q9P0N9 293 aa18.94■□□□□ 0.62
HDDC3-206ENST00000561036 LRRC37A2A6NM11 1700 aa18.94■□□□□ 0.62
HDDC3-206ENST00000561036 LGALS16A8MUM7 142 aa18.93■□□□□ 0.62
HDDC3-206ENST00000561036 RSPH10B2B2RC85 870 aa18.93■□□□□ 0.62
HDDC3-206ENST00000561036 NRDCO43847 1150 aa18.93■□□□□ 0.62
HDDC3-206ENST00000561036 PGK2P07205 417 aa18.93■□□□□ 0.62
HDDC3-206ENST00000561036 RSPH10BP0C881 870 aa18.93■□□□□ 0.62
HDDC3-206ENST00000561036 SFPQP23246 707 aaKnown RBP eCLIP18.93■□□□□ 0.62
HDDC3-206ENST00000561036 SP2Q02086 613 aa18.93■□□□□ 0.62
HDDC3-206ENST00000561036 UGCGQ16739 394 aa18.93■□□□□ 0.62
HDDC3-206ENST00000561036 KNOP1Q1ED39 458 aaKnown RBP18.93■□□□□ 0.62
HDDC3-206ENST00000561036 WDR78Q5VTH9 848 aa18.93■□□□□ 0.62
HDDC3-206ENST00000561036 RASAL3Q86YV0 1011 aa18.93■□□□□ 0.62
HDDC3-206ENST00000561036 ANKRD13CQ8N6S4 541 aa18.93■□□□□ 0.62
HDDC3-206ENST00000561036 ZNF526Q8TF50 670 aaPredicted RBP18.93■□□□□ 0.62
HDDC3-206ENST00000561036 CNOT6LQ96LI5 555 aaKnown RBP18.93■□□□□ 0.62
HDDC3-206ENST00000561036 R3HDMLQ9H3Y0 253 aa18.93■□□□□ 0.62
HDDC3-206ENST00000561036 EFCC1Q9HA90 598 aa18.93■□□□□ 0.62
HDDC3-206ENST00000561036 TAB2Q9NYJ8 693 aa18.93■□□□□ 0.62
HDDC3-206ENST00000561036 GABBR1Q9UBS5 961 aa18.93■□□□□ 0.62
HDDC3-206ENST00000561036 A0A1W2PQC6 194 aa18.92■□□□□ 0.62
HDDC3-206ENST00000561036 PDXKO00764 312 aa18.92■□□□□ 0.62
HDDC3-206ENST00000561036 HIP1RO75146 1068 aa18.92■□□□□ 0.62
HDDC3-206ENST00000561036 UBA1P22314 1058 aaKnown RBP18.92■□□□□ 0.62
HDDC3-206ENST00000561036 MAPK7Q13164 816 aa18.92■□□□□ 0.62
HDDC3-206ENST00000561036 ALCAMQ13740 583 aa18.92■□□□□ 0.62
HDDC3-206ENST00000561036 FAM110CQ1W6H9 321 aa18.92■□□□□ 0.62
HDDC3-206ENST00000561036 SWSAP1Q6NVH7 229 aa18.92■□□□□ 0.62
HDDC3-206ENST00000561036 LRRC55Q6ZSA7 311 aa18.92■□□□□ 0.62
HDDC3-206ENST00000561036 ZNF467Q7Z7K2 595 aaPredicted RBP18.92■□□□□ 0.62
HDDC3-206ENST00000561036 SLC17A8Q8NDX2 589 aa18.92■□□□□ 0.62
HDDC3-206ENST00000561036 CCDC112Q8NEF3 446 aa18.92■□□□□ 0.62
HDDC3-206ENST00000561036 DRC1Q96MC2 740 aa18.92■□□□□ 0.62
HDDC3-206ENST00000561036 PTPN18Q99952 460 aa18.92■□□□□ 0.62
HDDC3-206ENST00000561036 TUBGCP2Q9BSJ2 902 aa18.92■□□□□ 0.62
HDDC3-206ENST00000561036 FGFBP2Q9BYJ0 223 aa18.92■□□□□ 0.62
HDDC3-206ENST00000561036 VPS16Q9H269 839 aa18.92■□□□□ 0.62
HDDC3-206ENST00000561036 LARSQ9P2J5 1176 aaKnown RBP18.92■□□□□ 0.62
HDDC3-206ENST00000561036 TRAF3IP3Q9Y228 551 aa18.92■□□□□ 0.62
HDDC3-206ENST00000561036 IGSF9BQ9UPX0 1349 aa18.92■□□□□ 0.62
HDDC3-206ENST00000561036 IGKV6D-21A0A0A0MT36 114 aa18.91■□□□□ 0.62
HDDC3-206ENST00000561036 TEX33O43247 280 aa18.91■□□□□ 0.62
HDDC3-206ENST00000561036 CALUO43852 315 aaPredicted RBP18.91■□□□□ 0.62
HDDC3-206ENST00000561036 STBD1O95210 358 aa18.91■□□□□ 0.62
HDDC3-206ENST00000561036 MAPK4P31152 587 aa18.91■□□□□ 0.62
HDDC3-206ENST00000561036 MTIF2P46199 727 aaKnown RBP18.91■□□□□ 0.62
HDDC3-206ENST00000561036 DNM2P50570 870 aa18.91■□□□□ 0.62
HDDC3-206ENST00000561036 ZNF157P51786 506 aaPredicted RBP18.91■□□□□ 0.62
HDDC3-206ENST00000561036 INHBEP58166 350 aa18.91■□□□□ 0.62
HDDC3-206ENST00000561036 TRIM14Q14142 442 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms