RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 CHRM1P11229 460 aaPredicted RBP9.39□□□□□ -0.91
CCDC33-209ENST00000560565 PTPRAP18433 802 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 CCNE1P24864 410 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 HNRNPH1P31943 449 aaKnown RBP9.39□□□□□ -0.91
CCDC33-209ENST00000560565 STX17P56962 302 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 TBC1D8BQ0IIM8 1120 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 CRHR2Q13324 411 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 GRM4Q14833 912 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 E2F4Q16254 413 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 HSP90AA4PQ58FG1 418 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 DTHD1Q6ZMT9 781 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 TMTC3Q6ZXV5 915 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 SLC44A5Q8NCS7 719 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 PNMA1Q8ND90 353 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 SPATA4Q8NEY3 305 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 NUP133Q8WUM0 1156 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 CALR3Q96L12 384 aaKnown RBP9.39□□□□□ -0.91
CCDC33-209ENST00000560565 IFIH1Q9BYX4 1025 aaKnown RBP9.39□□□□□ -0.91
CCDC33-209ENST00000560565 CCSER1Q9C0I3 900 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 IL17RBQ9NRM6 502 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 MTMR4Q9NYA4 1195 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 PHIPQ8WWQ0 1821 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 SPTBN5Q9NRC6 3674 aaKnown RBP9.39□□□□□ -0.91
CCDC33-209ENST00000560565 CENPFP49454 3210 aa9.39□□□□□ -0.91
CCDC33-209ENST00000560565 PARP14Q460N5 1801 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 GCOM1H8Y6P7 765 aaPredicted RBP9.38□□□□□ -0.91
CCDC33-209ENST00000560565 CXCL11O14625 94 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 SLC26A4O43511 780 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 GNA14O95837 355 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 TTLL1O95922 423 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 MYZAPP0CAP1 466 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 KCNA4P22459 653 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 GBP1P32455 592 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 CAP2P40123 477 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 UBA7P41226 1012 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 MTIF2P46199 727 aaKnown RBP9.38□□□□□ -0.91
CCDC33-209ENST00000560565 EIF3BP55884 814 aaKnown RBP9.38□□□□□ -0.91
CCDC33-209ENST00000560565 NLRP5P59047 1200 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 EVX2Q03828 476 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 TAF1CQ15572 869 aaPredicted RBP9.38□□□□□ -0.91
CCDC33-209ENST00000560565 CERKLQ49MI3 558 aaPredicted RBP9.38□□□□□ -0.91
CCDC33-209ENST00000560565 PDXDC2PQ6P474 469 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 TMEM179Q6ZVK1 233 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 CACNA2D4Q7Z3S7 1137 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 CTU1Q7Z7A3 348 aaKnown RBP9.38□□□□□ -0.91
CCDC33-209ENST00000560565 CSGALNACT2Q8N6G5 542 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 ANKS4BQ8N8V4 417 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 GIMAP8Q8ND71 665 aaPredicted RBP9.38□□□□□ -0.91
CCDC33-209ENST00000560565 ZNF507Q8TCN5 953 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 LMBR1Q8WVP7 490 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 TAF4BQ92750 862 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 MKL1Q969V6 931 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 AIFM3Q96NN9 605 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 TSG101Q99816 390 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 TMEM47Q9BQJ4 181 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 TUBGCP2Q9BSJ2 902 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 RAB34Q9BZG1 259 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 STMN4Q9H169 189 aaPredicted RBP9.38□□□□□ -0.91
CCDC33-209ENST00000560565 SH2D4AQ9H788 454 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 VCPKMTQ9H867 229 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 KANSL2Q9H9L4 492 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 ZFYVE28Q9HCC9 887 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 BATF3Q9NR55 127 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 DISC1Q9NRI5 854 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 NYAP2Q9P242 653 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 KCNJ14Q9UNX9 436 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 PLAGL2Q9UPG8 496 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 KCNH4Q9UQ05 1017 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 AFG3L2Q9Y4W6 797 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 PTPRFP10586 1907 aa9.38□□□□□ -0.91
CCDC33-209ENST00000560565 PALM3A6NDB9 673 aaPredicted RBP9.37□□□□□ -0.91
CCDC33-209ENST00000560565 BTBD19C9JJ37 291 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 AKR1B10O60218 316 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 GHRP10912 638 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 AKR1B1P15121 316 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 CD44P16070 742 aaKnown RBP9.37□□□□□ -0.91
CCDC33-209ENST00000560565 NR1D1P20393 614 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 LIG3P49916 1009 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 HERVK_113P62684 666 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 LRRC63Q05C16 580 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 ACTN3Q08043 901 aaPredicted RBP9.37□□□□□ -0.91
CCDC33-209ENST00000560565 PSMD2Q13200 908 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 PTGDRQ13258 359 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 SEPT2Q15019 361 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 SNCBQ16143 134 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 SLC4A8Q2Y0W8 1093 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 ASPRV1Q53RT3 343 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 SPECC1Q5M775 1068 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 CEP85LQ5SZL2 805 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 FASTKD5Q7L8L6 764 aaKnown RBP9.37□□□□□ -0.91
CCDC33-209ENST00000560565 P2RX5Q93086 422 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 CEP95Q96GE4 821 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 ATP6V1G3Q96LB4 118 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 ANKRD27Q96NW4 1050 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 OSBPL9Q96SU4 736 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 PLCD4Q9BRC7 762 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 MYL10Q9BUA6 226 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 NOC4LQ9BVI4 516 aaKnown RBP9.37□□□□□ -0.91
CCDC33-209ENST00000560565 RIC8AQ9NPQ8 531 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 PLCB1Q9NQ66 1216 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms