RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 SUPT20HL2P0C7V6 817 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 ARP10275 920 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 ATP2B1P20020 1258 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 MARK3P27448 753 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 ICAM3P32942 547 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 CLK2P49760 499 aaKnown RBP9.07□□□□□ -0.96
LRRC28-219ENST00000560483 HMGN5P82970 282 aaKnown RBP9.07□□□□□ -0.96
LRRC28-219ENST00000560483 SETQ01105 290 aaPredicted RBP9.07□□□□□ -0.96
LRRC28-219ENST00000560483 INF2Q27J81 1249 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 LETM2Q2VYF4 491 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 GALNT17Q6IS24 598 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 PIK3AP1Q6ZUJ8 805 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 KRT25Q7Z3Z0 450 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 SH3RF1Q7Z6J0 888 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 TEX2Q8IWB9 1127 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 CKAP2LQ8IYA6 745 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 RETREG2Q8NC44 543 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 NSUN7Q8NE18 718 aaKnown RBP9.07□□□□□ -0.96
LRRC28-219ENST00000560483 CYP2W1Q8TAV3 490 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 TBCKQ8TEA7 893 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 BADQ92934 168 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 C8orf76Q96K31 380 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 TBC1D32Q96NH3 1257 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 BACH2Q9BYV9 841 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 TRPV6Q9H1D0 765 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 PDLIM7Q9NR12 457 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 GJB4Q9NTQ9 266 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 TRMT13Q9NUP7 481 aaKnown RBP9.07□□□□□ -0.96
LRRC28-219ENST00000560483 SLC9A2Q9UBY0 812 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 KIF3AQ9Y496 699 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 UBIAD1Q9Y5Z9 338 aa9.07□□□□□ -0.96
LRRC28-219ENST00000560483 H3BRB1 525 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 CHMP2AO43633 222 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 B4GALT4O60513 344 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 CCNT1O60563 726 aaKnown RBP9.06□□□□□ -0.96
LRRC28-219ENST00000560483 ATP9AO75110 1047 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 CTDNEP1O95476 244 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 LGALS2P05162 132 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 CYP2C9P11712 490 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 TCF7P36402 384 aaPredicted RBP9.06□□□□□ -0.96
LRRC28-219ENST00000560483 MCM2P49736 904 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 IGBP1P78318 339 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 FAAP100Q0VG06 881 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 SEMA3FQ13275 785 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 SNX17Q15036 470 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 PTGISQ16647 500 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 C1orf53Q5VUE5 145 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 MCTP1Q6DN14 999 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 TMEM199Q8N511 208 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 CCDC155Q8N6L0 562 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 SEPT1Q8WYJ6 367 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 IL17RAQ96F46 866 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 TOX2Q96NM4 488 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 KIF2CQ99661 725 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 GPR20Q99678 358 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 SENP7Q9BQF6 1050 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 LLPHQ9BRT6 129 aaKnown RBP9.06□□□□□ -0.96
LRRC28-219ENST00000560483 SEZ6LQ9BYH1 1024 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 HIPK3Q9H422 1215 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 TUT1Q9H6E5 874 aaKnown RBP9.06□□□□□ -0.96
LRRC28-219ENST00000560483 BCAS3Q9H6U6 928 aa9.06□□□□□ -0.96
LRRC28-219ENST00000560483 AGO4Q9HCK5 861 aaKnown RBP9.06□□□□□ -0.96
LRRC28-219ENST00000560483 C17orf102A2RUQ5 167 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 TRIM43BA6NCK2 446 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 FAM86B1E9PN63 330 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 H3BQV1 296 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 IPO5O00410 1097 aaKnown RBP9.05□□□□□ -0.96
LRRC28-219ENST00000560483 ADAMTS3O15072 1205 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 GAS7O60861 476 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 HSP90AA1P07900 732 aaKnown RBP9.05□□□□□ -0.96
LRRC28-219ENST00000560483 FAM86B2P0C5J1 330 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 BMP1P13497 986 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 KCNA2P16389 499 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 CYP2C18P33260 490 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 MMP16P51512 607 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 CCL23P55773 120 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 NKX3-2P78367 333 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 FPGSQ05932 587 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 FAM160B1Q5W0V3 765 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 KRT40Q6A162 431 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 MIS18BP1Q6P0N0 1132 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 NFRKBQ6P4R8 1299 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 ANKRD33Q7Z3H0 272 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 NEK8Q86SG6 692 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 TRIM50Q86XT4 487 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 FAM126BQ8IXS8 530 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 DIS3L2Q8IYB7 885 aaKnown RBP9.05□□□□□ -0.96
LRRC28-219ENST00000560483 TRIM43Q96BQ3 446 aaPredicted RBP9.05□□□□□ -0.96
LRRC28-219ENST00000560483 PHF20Q9BVI0 1012 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 TEKT3Q9BXF9 490 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 HDAC6Q9UBN7 1215 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 DDX25Q9UHL0 483 aaKnown RBP9.05□□□□□ -0.96
LRRC28-219ENST00000560483 SMC3Q9UQE7 1217 aa9.05□□□□□ -0.96
LRRC28-219ENST00000560483 MEIS1O00470 390 aa9.04□□□□□ -0.96
LRRC28-219ENST00000560483 TDP2O95551 362 aa9.04□□□□□ -0.96
LRRC28-219ENST00000560483 TIMP1P01033 207 aa9.04□□□□□ -0.96
LRRC28-219ENST00000560483 CYP3A4P08684 503 aa9.04□□□□□ -0.96
LRRC28-219ENST00000560483 SMIM10L2AP0DMW4 78 aa9.04□□□□□ -0.96
LRRC28-219ENST00000560483 SMIM10L2BP0DMW5 78 aa9.04□□□□□ -0.96
LRRC28-219ENST00000560483 GNAT1P11488 350 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms