RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 M0QZ92 97 aa19.1■□□□□ 0.65
HERC1-207ENST00000560316 MEIS2O14770 477 aa19.1■□□□□ 0.65
HERC1-207ENST00000560316 ERVFC1P60507 584 aa19.1■□□□□ 0.65
HERC1-207ENST00000560316 FOXK2Q01167 660 aa19.1■□□□□ 0.65
HERC1-207ENST00000560316 CACNB1Q02641 598 aaPredicted RBP19.1■□□□□ 0.65
HERC1-207ENST00000560316 HDAC1Q13547 482 aaPredicted RBP19.1■□□□□ 0.65
HERC1-207ENST00000560316 TMEM266Q2M3C6 531 aa19.1■□□□□ 0.65
HERC1-207ENST00000560316 XRRA1Q6P2D8 792 aa19.1■□□□□ 0.65
HERC1-207ENST00000560316 CUL5Q93034 780 aa19.1■□□□□ 0.65
HERC1-207ENST00000560316 S1PR5Q9H228 398 aa19.1■□□□□ 0.65
HERC1-207ENST00000560316 SMARCAD1Q9H4L7 1026 aa19.1■□□□□ 0.65
HERC1-207ENST00000560316 HCSTQ9UBK5 93 aa19.1■□□□□ 0.65
HERC1-207ENST00000560316 PCDHB12Q9Y5F1 795 aa19.1■□□□□ 0.65
HERC1-207ENST00000560316 IGSF9BQ9UPX0 1349 aa19.09■□□□□ 0.65
HERC1-207ENST00000560316 IFIT3O14879 490 aaKnown RBP19.09■□□□□ 0.65
HERC1-207ENST00000560316 ITGB5P18084 799 aa19.09■□□□□ 0.65
HERC1-207ENST00000560316 UBE3AQ05086 875 aa19.09■□□□□ 0.65
HERC1-207ENST00000560316 TRAPPC12Q8WVT3 735 aa19.09■□□□□ 0.65
HERC1-207ENST00000560316 GPRASP2Q96D09 838 aa19.09■□□□□ 0.65
HERC1-207ENST00000560316 PCYT2Q99447 389 aa19.09■□□□□ 0.65
HERC1-207ENST00000560316 CDCA3Q99618 268 aaPredicted RBP19.09■□□□□ 0.65
HERC1-207ENST00000560316 IL25Q9H293 177 aa19.09■□□□□ 0.65
HERC1-207ENST00000560316 PCDHB7Q9Y5E2 793 aa19.09■□□□□ 0.65
HERC1-207ENST00000560316 LOXHD1Q8IVV2 1947 aa19.08■□□□□ 0.65
HERC1-207ENST00000560316 RRN3P2A6NIE6 340 aa19.08■□□□□ 0.64
HERC1-207ENST00000560316 TBKBP1A7MCY6 615 aa19.08■□□□□ 0.64
HERC1-207ENST00000560316 PROB1E7EW31 1015 aa19.08■□□□□ 0.64
HERC1-207ENST00000560316 GALR2O43603 387 aaPredicted RBP19.08■□□□□ 0.64
HERC1-207ENST00000560316 MGEA5O60502 916 aa19.08■□□□□ 0.64
HERC1-207ENST00000560316 FGF18O76093 207 aa19.08■□□□□ 0.64
HERC1-207ENST00000560316 RPLP2P05387 115 aaKnown RBP19.08■□□□□ 0.64
HERC1-207ENST00000560316 TECP42680 631 aa19.08■□□□□ 0.64
HERC1-207ENST00000560316 SARSP49591 514 aaKnown RBP19.08■□□□□ 0.64
HERC1-207ENST00000560316 APOBRQ0VD83 1088 aa19.08■□□□□ 0.64
HERC1-207ENST00000560316 TROAPQ12815 778 aa19.08■□□□□ 0.64
HERC1-207ENST00000560316 B4GALNT3Q6L9W6 998 aa19.08■□□□□ 0.64
HERC1-207ENST00000560316 ANKRD54Q6NXT1 300 aa19.08■□□□□ 0.64
HERC1-207ENST00000560316 LLGL2Q6P1M3 1020 aa19.08■□□□□ 0.64
HERC1-207ENST00000560316 PLEKHM2Q8IWE5 1019 aa19.08■□□□□ 0.64
HERC1-207ENST00000560316 CELF4Q9BZC1 486 aaKnown RBP19.08■□□□□ 0.64
HERC1-207ENST00000560316 TMEM260Q9NX78 707 aa19.08■□□□□ 0.64
HERC1-207ENST00000560316 PIK3CDO00329 1044 aa19.07■□□□□ 0.64
HERC1-207ENST00000560316 FSCN2O14926 492 aa19.07■□□□□ 0.64
HERC1-207ENST00000560316 NFX1Q12986 1120 aaKnown RBP19.07■□□□□ 0.64
HERC1-207ENST00000560316 FAM102BQ5T8I3 360 aa19.07■□□□□ 0.64
HERC1-207ENST00000560316 PLPP4Q5VZY2 271 aa19.07■□□□□ 0.64
HERC1-207ENST00000560316 SYCE2Q6PIF2 218 aa19.07■□□□□ 0.64
HERC1-207ENST00000560316 THNSL1Q8IYQ7 743 aa19.07■□□□□ 0.64
HERC1-207ENST00000560316 KREMEN2Q8NCW0 462 aa19.07■□□□□ 0.64
HERC1-207ENST00000560316 CDHR1Q96JP9 859 aa19.07■□□□□ 0.64
HERC1-207ENST00000560316 AAASQ9NRG9 546 aa19.07■□□□□ 0.64
HERC1-207ENST00000560316 CDH22Q9UJ99 828 aa19.07■□□□□ 0.64
HERC1-207ENST00000560316 TRPC6Q9Y210 931 aa19.07■□□□□ 0.64
HERC1-207ENST00000560316 PCDHA2Q9Y5H9 948 aa19.07■□□□□ 0.64
HERC1-207ENST00000560316 DMDP11532 3685 aa19.06■□□□□ 0.64
HERC1-207ENST00000560316 HIP1O00291 1037 aa19.06■□□□□ 0.64
HERC1-207ENST00000560316 NUBP1P53384 320 aa19.06■□□□□ 0.64
HERC1-207ENST00000560316 TRDNQ13061 729 aa19.06■□□□□ 0.64
HERC1-207ENST00000560316 MTMR1Q13613 665 aa19.06■□□□□ 0.64
HERC1-207ENST00000560316 KCNC3Q14003 757 aa19.06■□□□□ 0.64
HERC1-207ENST00000560316 WTAPQ15007 396 aa19.06■□□□□ 0.64
HERC1-207ENST00000560316 TMEM184AQ6ZMB5 413 aa19.06■□□□□ 0.64
HERC1-207ENST00000560316 COLGALT1Q8NBJ5 622 aa19.06■□□□□ 0.64
HERC1-207ENST00000560316 TSHZ2Q9NRE2 1034 aa19.06■□□□□ 0.64
HERC1-207ENST00000560316 TYW1Q9NV66 732 aaKnown RBP19.06■□□□□ 0.64
HERC1-207ENST00000560316 RIF1Q5UIP0 2472 aaKnown RBP19.06■□□□□ 0.64
HERC1-207ENST00000560316 FNDC1Q4ZHG4 1894 aaPredicted RBP19.05■□□□□ 0.64
HERC1-207ENST00000560316 ERICH2A1L162 156 aa19.05■□□□□ 0.64
HERC1-207ENST00000560316 FSD2A1L4K1 749 aa19.05■□□□□ 0.64
HERC1-207ENST00000560316 PRR23AA6NEV1 266 aa19.05■□□□□ 0.64
HERC1-207ENST00000560316 SRGAP2BP0DMP2 458 aa19.05■□□□□ 0.64
HERC1-207ENST00000560316 KRT76Q01546 638 aa19.05■□□□□ 0.64
HERC1-207ENST00000560316 PLCB4Q15147 1175 aa19.05■□□□□ 0.64
HERC1-207ENST00000560316 TMEM105Q8N8V8 129 aa19.05■□□□□ 0.64
HERC1-207ENST00000560316 RRP36Q96EU6 259 aaKnown RBP19.05■□□□□ 0.64
HERC1-207ENST00000560316 OSBPL3Q9H4L5 887 aa19.05■□□□□ 0.64
HERC1-207ENST00000560316 GINS2Q9Y248 185 aa19.05■□□□□ 0.64
HERC1-207ENST00000560316 UBIAD1Q9Y5Z9 338 aa19.05■□□□□ 0.64
HERC1-207ENST00000560316 KDM3AQ9Y4C1 1321 aa19.04■□□□□ 0.64
HERC1-207ENST00000560316 BRD1O95696 1058 aa19.04■□□□□ 0.64
HERC1-207ENST00000560316 PDE12Q6L8Q7 609 aaKnown RBP19.04■□□□□ 0.64
HERC1-207ENST00000560316 CATIPQ7Z7H3 387 aa19.04■□□□□ 0.64
HERC1-207ENST00000560316 ADAM2Q99965 735 aa19.04■□□□□ 0.64
HERC1-207ENST00000560316 SMOC2Q9H3U7 446 aa19.04■□□□□ 0.64
HERC1-207ENST00000560316 AZI2Q9H6S1 392 aa19.04■□□□□ 0.64
HERC1-207ENST00000560316 CDHR5Q9HBB8 845 aa19.04■□□□□ 0.64
HERC1-207ENST00000560316 ERVK-5Q9HDB9 667 aa19.04■□□□□ 0.64
HERC1-207ENST00000560316 JPH1Q9HDC5 661 aaPredicted RBP19.04■□□□□ 0.64
HERC1-207ENST00000560316 VPS13AQ96RL7 3174 aa19.03■□□□□ 0.64
HERC1-207ENST00000560316 SMIM35A0A1B0GVV1 85 aa19.03■□□□□ 0.64
HERC1-207ENST00000560316 DENND3A2RUS2 1198 aa19.03■□□□□ 0.64
HERC1-207ENST00000560316 HIDE1A8MVS5 230 aa19.03■□□□□ 0.64
HERC1-207ENST00000560316 NBL1P41271 181 aa19.03■□□□□ 0.64
HERC1-207ENST00000560316 MTMR3Q13615 1198 aa19.03■□□□□ 0.64
HERC1-207ENST00000560316 UBE2SQ16763 222 aa19.03■□□□□ 0.64
HERC1-207ENST00000560316 MTHFD1LQ6UB35 978 aa19.03■□□□□ 0.64
HERC1-207ENST00000560316 TCF25Q9BQ70 676 aa19.03■□□□□ 0.64
HERC1-207ENST00000560316 MYL10Q9BUA6 226 aa19.03■□□□□ 0.64
HERC1-207ENST00000560316 SPZ1Q9BXG8 430 aa19.03■□□□□ 0.64
HERC1-207ENST00000560316 CWH43Q9H720 699 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms