RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 HSP90AA1P07900 732 aaKnown RBP18.93■□□□□ 0.62
RPL28-209ENST00000560055 TXKP42681 527 aa18.93■□□□□ 0.62
RPL28-209ENST00000560055 RESTQ13127 1097 aa18.93■□□□□ 0.62
RPL28-209ENST00000560055 EPHA7Q15375 998 aa18.93■□□□□ 0.62
RPL28-209ENST00000560055 FERMT3Q86UX7 667 aa18.93■□□□□ 0.62
RPL28-209ENST00000560055 FAM167AQ96KS9 214 aa18.93■□□□□ 0.62
RPL28-209ENST00000560055 LBHD1Q9BQE6 289 aaPredicted RBP18.93■□□□□ 0.62
RPL28-209ENST00000560055 MYH9P35579 1960 aaKnown RBP18.93■□□□□ 0.62
RPL28-209ENST00000560055 STBD1O95210 358 aa18.92■□□□□ 0.62
RPL28-209ENST00000560055 PRKCEQ02156 737 aa18.92■□□□□ 0.62
RPL28-209ENST00000560055 PTGDRQ13258 359 aa18.92■□□□□ 0.62
RPL28-209ENST00000560055 BFSP2Q13515 415 aa18.92■□□□□ 0.62
RPL28-209ENST00000560055 NCAPH2Q6IBW4 605 aa18.92■□□□□ 0.62
RPL28-209ENST00000560055 TUBE1Q9UJT0 475 aa18.92■□□□□ 0.62
RPL28-209ENST00000560055 COL1A2P08123 1366 aa18.92■□□□□ 0.62
RPL28-209ENST00000560055 KAT6AQ92794 2004 aa18.91■□□□□ 0.62
RPL28-209ENST00000560055 LAD1O00515 517 aa18.91■□□□□ 0.62
RPL28-209ENST00000560055 OATP04181 439 aa18.91■□□□□ 0.62
RPL28-209ENST00000560055 P4HBP07237 508 aaKnown RBP18.91■□□□□ 0.62
RPL28-209ENST00000560055 CKBP12277 381 aa18.91■□□□□ 0.62
RPL28-209ENST00000560055 QARSP47897 775 aaKnown RBP18.91■□□□□ 0.62
RPL28-209ENST00000560055 FXR2P51116 673 aaKnown RBP eCLIP18.91■□□□□ 0.62
RPL28-209ENST00000560055 PSMC5P62195 406 aa18.91■□□□□ 0.62
RPL28-209ENST00000560055 ATP2C1P98194 919 aaPredicted RBP18.91■□□□□ 0.62
RPL28-209ENST00000560055 TRAF7Q6Q0C0 670 aa18.91■□□□□ 0.62
RPL28-209ENST00000560055 RPAINQ86UA6 219 aa18.91■□□□□ 0.62
RPL28-209ENST00000560055 CKAP2LQ8IYA6 745 aa18.91■□□□□ 0.62
RPL28-209ENST00000560055 CCDC155Q8N6L0 562 aa18.91■□□□□ 0.62
RPL28-209ENST00000560055 BANK1Q8NDB2 785 aa18.91■□□□□ 0.62
RPL28-209ENST00000560055 TRAPPC12Q8WVT3 735 aa18.91■□□□□ 0.62
RPL28-209ENST00000560055 VWCEQ96DN2 955 aa18.91■□□□□ 0.62
RPL28-209ENST00000560055 HSD17B14Q9BPX1 270 aa18.91■□□□□ 0.62
RPL28-209ENST00000560055 WRAP73Q9P2S5 460 aaPredicted RBP18.91■□□□□ 0.62
RPL28-209ENST00000560055 POTEMA6NI47 508 aa18.9■□□□□ 0.62
RPL28-209ENST00000560055 IQCF3P0C7M6 154 aa18.9■□□□□ 0.62
RPL28-209ENST00000560055 PDIA4P13667 645 aaKnown RBP18.9■□□□□ 0.62
RPL28-209ENST00000560055 PRPHP41219 470 aa18.9■□□□□ 0.62
RPL28-209ENST00000560055 CCL23P55773 120 aa18.9■□□□□ 0.62
RPL28-209ENST00000560055 IGBP1P78318 339 aa18.9■□□□□ 0.62
RPL28-209ENST00000560055 FPGSQ05932 587 aa18.9■□□□□ 0.62
RPL28-209ENST00000560055 ZNF484Q5JVG2 852 aa18.9■□□□□ 0.62
RPL28-209ENST00000560055 TAF2Q6P1X5 1199 aa18.9■□□□□ 0.62
RPL28-209ENST00000560055 RUFY4Q6ZNE9 571 aa18.9■□□□□ 0.62
RPL28-209ENST00000560055 TMEM199Q8N511 208 aa18.9■□□□□ 0.62
RPL28-209ENST00000560055 ZBTB10Q96DT7 871 aa18.9■□□□□ 0.62
RPL28-209ENST00000560055 EIF2AK1Q9BQI3 630 aaKnown RBP18.9■□□□□ 0.62
RPL28-209ENST00000560055 LXNQ9BS40 222 aa18.9■□□□□ 0.62
RPL28-209ENST00000560055 UBE2OQ9C0C9 1292 aaKnown RBP18.9■□□□□ 0.62
RPL28-209ENST00000560055 RGL1Q9NZL6 768 aa18.9■□□□□ 0.62
RPL28-209ENST00000560055 CAND2O75155 1236 aa18.89■□□□□ 0.61
RPL28-209ENST00000560055 SLITRK3O94933 977 aa18.89■□□□□ 0.61
RPL28-209ENST00000560055 CSF2RAP15509 400 aa18.89■□□□□ 0.61
RPL28-209ENST00000560055 SELPP16109 830 aa18.89■□□□□ 0.61
RPL28-209ENST00000560055 TECP42680 631 aa18.89■□□□□ 0.61
RPL28-209ENST00000560055 EPHB4P54760 987 aa18.89■□□□□ 0.61
RPL28-209ENST00000560055 TARBP2Q15633 366 aaKnown RBP18.89■□□□□ 0.61
RPL28-209ENST00000560055 XKR3Q5GH77 459 aa18.89■□□□□ 0.61
RPL28-209ENST00000560055 MTHFD1LQ6UB35 978 aa18.89■□□□□ 0.61
RPL28-209ENST00000560055 SPRYD3Q8NCJ5 442 aa18.89■□□□□ 0.61
RPL28-209ENST00000560055 NEK9Q8TD19 979 aa18.89■□□□□ 0.61
RPL28-209ENST00000560055 SCLYQ96I15 445 aa18.89■□□□□ 0.61
RPL28-209ENST00000560055 DYDC2Q96IM9 177 aa18.89■□□□□ 0.61
RPL28-209ENST00000560055 NIFKQ9BYG3 293 aaKnown RBP18.89■□□□□ 0.61
RPL28-209ENST00000560055 ZSCAN16Q9H4T2 348 aaPredicted RBP18.89■□□□□ 0.61
RPL28-209ENST00000560055 CEP131Q9UPN4 1083 aa18.89■□□□□ 0.61
RPL28-209ENST00000560055 PCDHA2Q9Y5H9 948 aa18.89■□□□□ 0.61
RPL28-209ENST00000560055 TANC1Q9C0D5 1861 aa18.88■□□□□ 0.61
RPL28-209ENST00000560055 C22orf31O95567 290 aa18.88■□□□□ 0.61
RPL28-209ENST00000560055 PPIGQ13427 754 aaKnown RBP eCLIP18.88■□□□□ 0.614e-7■■■□□ 16.8
RPL28-209ENST00000560055 BECN1Q14457 450 aa18.88■□□□□ 0.61
RPL28-209ENST00000560055 GPNMBQ14956 572 aa18.88■□□□□ 0.61
RPL28-209ENST00000560055 IL17AQ16552 155 aa18.88■□□□□ 0.61
RPL28-209ENST00000560055 ZNF618Q5T7W0 954 aa18.88■□□□□ 0.61
RPL28-209ENST00000560055 ANO5Q75V66 913 aa18.88■□□□□ 0.61
RPL28-209ENST00000560055 LRRC8DQ7L1W4 858 aa18.88■□□□□ 0.61
RPL28-209ENST00000560055 C4orf19Q8IY42 314 aa18.88■□□□□ 0.61
RPL28-209ENST00000560055 TDHQ8IZJ6 230 aa18.88■□□□□ 0.61
RPL28-209ENST00000560055 IGSF22Q8N9C0 903 aa18.88■□□□□ 0.61
RPL28-209ENST00000560055 RETREG2Q8NC44 543 aa18.88■□□□□ 0.61
RPL28-209ENST00000560055 CEP89Q96ST8 783 aa18.88■□□□□ 0.61
RPL28-209ENST00000560055 ZSWIM4Q9H7M6 989 aa18.88■□□□□ 0.61
RPL28-209ENST00000560055 NRBP2Q9NSY0 501 aa18.88■□□□□ 0.61
RPL28-209ENST00000560055 SMIM35A0A1B0GVV1 85 aa18.87■□□□□ 0.61
RPL28-209ENST00000560055 DKC1O60832 514 aaKnown RBP eCLIP18.87■□□□□ 0.61
RPL28-209ENST00000560055 LYPLA2O95372 231 aa18.87■□□□□ 0.61
RPL28-209ENST00000560055 SPATA31C1P0DKV0 1188 aa18.87■□□□□ 0.61
RPL28-209ENST00000560055 KLRC1P26715 233 aa18.87■□□□□ 0.61
RPL28-209ENST00000560055 RFC2P35250 354 aa18.87■□□□□ 0.61
RPL28-209ENST00000560055 THPOP40225 353 aa18.87■□□□□ 0.61
RPL28-209ENST00000560055 CYP4A11Q02928 519 aa18.87■□□□□ 0.61
RPL28-209ENST00000560055 CTTNQ14247 550 aaKnown RBP18.87■□□□□ 0.61
RPL28-209ENST00000560055 PDIA5Q14554 519 aa18.87■□□□□ 0.61
RPL28-209ENST00000560055 MBTPS1Q14703 1052 aa18.87■□□□□ 0.61
RPL28-209ENST00000560055 TMEM266Q2M3C6 531 aa18.87■□□□□ 0.61
RPL28-209ENST00000560055 ARL6IP4Q66PJ3 421 aaKnown RBP18.87■□□□□ 0.61
RPL28-209ENST00000560055 FAM173BQ6P4H8 233 aa18.87■□□□□ 0.61
RPL28-209ENST00000560055 C16orf59Q7L2K0 433 aa18.87■□□□□ 0.61
RPL28-209ENST00000560055 TRMT1LQ7Z2T5 733 aaKnown RBP18.87■□□□□ 0.61
RPL28-209ENST00000560055 IL23AQ9NPF7 189 aa18.87■□□□□ 0.61
RPL28-209ENST00000560055 TMEM150BA6NC51 233 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms