RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 POTEDQ86YR6 584 aa16.77■□□□□ 0.28
RABGGTA-211ENST00000559850 RIT2Q99578 217 aa16.77■□□□□ 0.28
RABGGTA-211ENST00000559850 LLPHQ9BRT6 129 aaKnown RBP16.77■□□□□ 0.28
RABGGTA-211ENST00000559850 BRMS1Q9HCU9 246 aa16.77■□□□□ 0.28
RABGGTA-211ENST00000559850 SH2B1Q9NRF2 756 aaPredicted RBP16.77■□□□□ 0.28
RABGGTA-211ENST00000559850 DISC1Q9NRI5 854 aa16.77■□□□□ 0.28
RABGGTA-211ENST00000559850 YBX2Q9Y2T7 364 aaKnown RBP16.77■□□□□ 0.28
RABGGTA-211ENST00000559850 PCDHA10Q9Y5I2 948 aa16.77■□□□□ 0.28
RABGGTA-211ENST00000559850 MBLAC1A4D2B0 266 aaPredicted RBP16.76■□□□□ 0.27
RABGGTA-211ENST00000559850 WDR64B1ANS9 1081 aa16.76■□□□□ 0.27
RABGGTA-211ENST00000559850 ST18O60284 1047 aa16.76■□□□□ 0.27
RABGGTA-211ENST00000559850 CHRNA1P02708 482 aa16.76■□□□□ 0.27
RABGGTA-211ENST00000559850 DEFB103AP81534 67 aa16.76■□□□□ 0.27
RABGGTA-211ENST00000559850 MOXD1Q6UVY6 613 aa16.76■□□□□ 0.27
RABGGTA-211ENST00000559850 SMAP1Q8IYB5 467 aaPredicted RBP16.76■□□□□ 0.27
RABGGTA-211ENST00000559850 ATP8B4Q8TF62 1192 aa16.76■□□□□ 0.27
RABGGTA-211ENST00000559850 C8orf76Q96K31 380 aa16.76■□□□□ 0.27
RABGGTA-211ENST00000559850 MTMR10Q9NXD2 777 aa16.76■□□□□ 0.27
RABGGTA-211ENST00000559850 MAFBQ9Y5Q3 323 aaPredicted RBP16.76■□□□□ 0.27
RABGGTA-211ENST00000559850 IGSF9BQ9UPX0 1349 aa16.75■□□□□ 0.27
RABGGTA-211ENST00000559850 RRN3P2A6NIE6 340 aa16.75■□□□□ 0.27
RABGGTA-211ENST00000559850 ZBTB42B2RXF5 422 aa16.75■□□□□ 0.27
RABGGTA-211ENST00000559850 ZNF862O60290 1169 aa16.75■□□□□ 0.27
RABGGTA-211ENST00000559850 ATP2A2P16615 1042 aaKnown RBP16.75■□□□□ 0.27
RABGGTA-211ENST00000559850 MGAT3Q09327 533 aa16.75■□□□□ 0.27
RABGGTA-211ENST00000559850 CNKSR3Q6P9H4 555 aa16.75■□□□□ 0.27
RABGGTA-211ENST00000559850 MTHFD1LQ6UB35 978 aa16.75■□□□□ 0.27
RABGGTA-211ENST00000559850 MIER3Q7Z3K6 550 aa16.75■□□□□ 0.27
RABGGTA-211ENST00000559850 FAM184AQ8NB25 1140 aa16.75■□□□□ 0.27
RABGGTA-211ENST00000559850 DBF4BQ8NFT6 615 aa16.75■□□□□ 0.27
RABGGTA-211ENST00000559850 TIFAQ96CG3 184 aa16.75■□□□□ 0.27
RABGGTA-211ENST00000559850 GUCD1Q96NT3 240 aa16.75■□□□□ 0.27
RABGGTA-211ENST00000559850 BACH2Q9BYV9 841 aa16.75■□□□□ 0.27
RABGGTA-211ENST00000559850 NKX2-4Q9H2Z4 354 aa16.75■□□□□ 0.27
RABGGTA-211ENST00000559850 SEMA6BQ9H3T3 888 aa16.75■□□□□ 0.27
RABGGTA-211ENST00000559850 CDY2AQ9Y6F7 541 aa16.75■□□□□ 0.27
RABGGTA-211ENST00000559850 TMEM150BA6NC51 233 aa16.74■□□□□ 0.27
RABGGTA-211ENST00000559850 EML1O00423 815 aa16.74■□□□□ 0.27
RABGGTA-211ENST00000559850 HBP1O60381 514 aa16.74■□□□□ 0.27
RABGGTA-211ENST00000559850 GHRP10912 638 aa16.74■□□□□ 0.27
RABGGTA-211ENST00000559850 ATP2B1P20020 1258 aa16.74■□□□□ 0.27
RABGGTA-211ENST00000559850 KLRC1P26715 233 aa16.74■□□□□ 0.27
RABGGTA-211ENST00000559850 SLC26A2P50443 739 aa16.74■□□□□ 0.27
RABGGTA-211ENST00000559850 WDR5P61964 334 aaKnown RBP16.74■□□□□ 0.27
RABGGTA-211ENST00000559850 FAM26DQ5JW98 314 aa16.74■□□□□ 0.27
RABGGTA-211ENST00000559850 PPP4R3AQ6IN85 833 aa16.74■□□□□ 0.27
RABGGTA-211ENST00000559850 TAF2Q6P1X5 1199 aa16.74■□□□□ 0.27
RABGGTA-211ENST00000559850 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.74■□□□□ 0.27
RABGGTA-211ENST00000559850 HAS1Q92839 578 aa16.74■□□□□ 0.27
RABGGTA-211ENST00000559850 TMX3Q96JJ7 454 aa16.74■□□□□ 0.27
RABGGTA-211ENST00000559850 KCNMB3Q9NPA1 279 aa16.74■□□□□ 0.27
RABGGTA-211ENST00000559850 VAV3Q9UKW4 847 aa16.74■□□□□ 0.27
RABGGTA-211ENST00000559850 MARCH6O60337 910 aa16.73■□□□□ 0.27
RABGGTA-211ENST00000559850 CAND2O75155 1236 aa16.73■□□□□ 0.27
RABGGTA-211ENST00000559850 PARNO95453 639 aaKnown RBP16.73■□□□□ 0.27
RABGGTA-211ENST00000559850 GCFC2P16383 781 aaKnown RBP16.73■□□□□ 0.27
RABGGTA-211ENST00000559850 KCNJ6P48051 423 aa16.73■□□□□ 0.27
RABGGTA-211ENST00000559850 JAK3P52333 1124 aa16.73■□□□□ 0.27
RABGGTA-211ENST00000559850 MRPS6P82932 125 aaKnown RBP16.73■□□□□ 0.27
RABGGTA-211ENST00000559850 PRKCEQ02156 737 aa16.73■□□□□ 0.27
RABGGTA-211ENST00000559850 PLEKHG4Q58EX7 1191 aa16.73■□□□□ 0.27
RABGGTA-211ENST00000559850 FAM117BQ6P1L5 589 aa16.73■□□□□ 0.27
RABGGTA-211ENST00000559850 B3GNT9Q6UX72 402 aa16.73■□□□□ 0.27
RABGGTA-211ENST00000559850 BANK1Q8NDB2 785 aa16.73■□□□□ 0.27
RABGGTA-211ENST00000559850 PPP1R16BQ96T49 567 aa16.73■□□□□ 0.27
RABGGTA-211ENST00000559850 SH2D3AQ9BRG2 576 aa16.73■□□□□ 0.27
RABGGTA-211ENST00000559850 PCDHA2Q9Y5H9 948 aa16.73■□□□□ 0.27
RABGGTA-211ENST00000559850 ARID2Q68CP9 1835 aa16.73■□□□□ 0.27
RABGGTA-211ENST00000559850 KIF28PB7ZC32 967 aa16.72■□□□□ 0.27
RABGGTA-211ENST00000559850 BAIAP3O94812 1187 aa16.72■□□□□ 0.27
RABGGTA-211ENST00000559850 OATP04181 439 aa16.72■□□□□ 0.27
RABGGTA-211ENST00000559850 SFNP31947 248 aa16.72■□□□□ 0.27
RABGGTA-211ENST00000559850 HMGN5P82970 282 aaKnown RBP16.72■□□□□ 0.27
RABGGTA-211ENST00000559850 IKBKEQ14164 716 aa16.72■□□□□ 0.27
RABGGTA-211ENST00000559850 LPIN1Q14693 890 aa16.72■□□□□ 0.27
RABGGTA-211ENST00000559850 GRIN2CQ14957 1233 aa16.72■□□□□ 0.27
RABGGTA-211ENST00000559850 SAFBQ15424 915 aaKnown RBP eCLIP16.72■□□□□ 0.27
RABGGTA-211ENST00000559850 ZNF484Q5JVG2 852 aa16.72■□□□□ 0.27
RABGGTA-211ENST00000559850 RSPH3Q86UC2 560 aa16.72■□□□□ 0.27
RABGGTA-211ENST00000559850 HERC6Q8IVU3 1022 aa16.72■□□□□ 0.27
RABGGTA-211ENST00000559850 BBXQ8WY36 941 aaPredicted RBP16.72■□□□□ 0.27
RABGGTA-211ENST00000559850 MYLIPQ8WY64 445 aa16.72■□□□□ 0.27
RABGGTA-211ENST00000559850 TNPO1Q92973 898 aaKnown RBP16.72■□□□□ 0.27
RABGGTA-211ENST00000559850 SLC9A7Q96T83 725 aa16.72■□□□□ 0.27
RABGGTA-211ENST00000559850 MSRAQ9UJ68 235 aa16.72■□□□□ 0.27
RABGGTA-211ENST00000559850 COL1A2P08123 1366 aa16.72■□□□□ 0.27
RABGGTA-211ENST00000559850 ARHGEF15O94989 841 aa16.71■□□□□ 0.27
RABGGTA-211ENST00000559850 C22orf31O95567 290 aa16.71■□□□□ 0.27
RABGGTA-211ENST00000559850 RAB30Q15771 203 aa16.71■□□□□ 0.27
RABGGTA-211ENST00000559850 NCAPH2Q6IBW4 605 aa16.71■□□□□ 0.27
RABGGTA-211ENST00000559850 RPAINQ86UA6 219 aa16.71■□□□□ 0.27
RABGGTA-211ENST00000559850 FBXO18Q8NFZ0 1043 aa16.71■□□□□ 0.27
RABGGTA-211ENST00000559850 SEPT8Q92599 483 aa16.71■□□□□ 0.27
RABGGTA-211ENST00000559850 FAM20AQ96MK3 541 aa16.71■□□□□ 0.27
RABGGTA-211ENST00000559850 CDX2Q99626 313 aaPredicted RBP16.71■□□□□ 0.27
RABGGTA-211ENST00000559850 NAP1L4Q99733 375 aaKnown RBP16.71■□□□□ 0.27
RABGGTA-211ENST00000559850 ZNF576Q9H609 170 aa16.71■□□□□ 0.27
RABGGTA-211ENST00000559850 SEPT9Q9UHD8 586 aaPredicted RBP16.71■□□□□ 0.27
RABGGTA-211ENST00000559850 TRPV2Q9Y5S1 764 aa16.71■□□□□ 0.27
RABGGTA-211ENST00000559850 SMIM35A0A1B0GVV1 85 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms