RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 CDK5RAP1Q96SZ6 601 aaKnown RBP5.6□□□□□ -1.51
SPG11-218ENST00000559754 DNAJC2Q99543 621 aaKnown RBP5.6□□□□□ -1.51
SPG11-218ENST00000559754 JAG2Q9Y219 1238 aa5.6□□□□□ -1.51
SPG11-218ENST00000559754 PTCH2Q9Y6C5 1203 aa5.6□□□□□ -1.51
SPG11-218ENST00000559754 SLC12A8A0AV02 714 aa5.59□□□□□ -1.51
SPG11-218ENST00000559754 ESYT3A0FGR9 886 aa5.59□□□□□ -1.51
SPG11-218ENST00000559754 GPR42O15529 346 aa5.59□□□□□ -1.51
SPG11-218ENST00000559754 RASGRP1O95267 797 aa5.59□□□□□ -1.51
SPG11-218ENST00000559754 ZNF20P17024 532 aa5.59□□□□□ -1.51
SPG11-218ENST00000559754 TOP3AQ13472 1001 aaPredicted RBP5.59□□□□□ -1.51
SPG11-218ENST00000559754 GPR155Q7Z3F1 870 aa5.59□□□□□ -1.51
SPG11-218ENST00000559754 SCYL1Q96KG9 808 aa5.59□□□□□ -1.51
SPG11-218ENST00000559754 BTBD2Q9BX70 525 aa5.59□□□□□ -1.51
SPG11-218ENST00000559754 KCNH7Q9NS40 1196 aa5.59□□□□□ -1.51
SPG11-218ENST00000559754 ST6GALNAC2Q9UJ37 374 aa5.59□□□□□ -1.51
SPG11-218ENST00000559754 COQ6Q9Y2Z9 468 aa5.59□□□□□ -1.51
SPG11-218ENST00000559754 TCRBV16S1A1N1A0A5B0 115 aa5.58□□□□□ -1.52
SPG11-218ENST00000559754 B4E1Z4 1266 aa5.58□□□□□ -1.52
SPG11-218ENST00000559754 SCDO00767 359 aa5.58□□□□□ -1.52
SPG11-218ENST00000559754 KCNK3O14649 394 aa5.58□□□□□ -1.52
SPG11-218ENST00000559754 PLD2O14939 933 aa5.58□□□□□ -1.52
SPG11-218ENST00000559754 IGSF3O75054 1194 aa5.58□□□□□ -1.52
SPG11-218ENST00000559754 HIP1RO75146 1068 aa5.58□□□□□ -1.52
SPG11-218ENST00000559754 CNOT4O95628 575 aaKnown RBP5.58□□□□□ -1.52
SPG11-218ENST00000559754 ETV4P43268 484 aa5.58□□□□□ -1.52
SPG11-218ENST00000559754 PUM1Q14671 1186 aaKnown RBP eCLIP5.58□□□□□ -1.52
SPG11-218ENST00000559754 ZMAT1Q5H9K5 638 aa5.58□□□□□ -1.52
SPG11-218ENST00000559754 BRAPQ7Z569 592 aa5.58□□□□□ -1.52
SPG11-218ENST00000559754 DNERQ8NFT8 737 aa5.58□□□□□ -1.52
SPG11-218ENST00000559754 MRFAP1L1Q96HT8 127 aa5.58□□□□□ -1.52
SPG11-218ENST00000559754 WNK4Q96J92 1243 aa5.58□□□□□ -1.52
SPG11-218ENST00000559754 LMF1Q96S06 567 aa5.58□□□□□ -1.52
SPG11-218ENST00000559754 KRTAP3-1Q9BYR8 98 aa5.58□□□□□ -1.52
SPG11-218ENST00000559754 MEGF9Q9H1U4 602 aa5.58□□□□□ -1.52
SPG11-218ENST00000559754 SEMA4AQ9H3S1 761 aa5.58□□□□□ -1.52
SPG11-218ENST00000559754 DEF6Q9H4E7 631 aa5.58□□□□□ -1.52
SPG11-218ENST00000559754 NCOA5Q9HCD5 579 aaKnown RBP5.58□□□□□ -1.52
SPG11-218ENST00000559754 BTBD7Q9P203 1132 aa5.58□□□□□ -1.52
SPG11-218ENST00000559754 CDK11AQ9UQ88 783 aaPredicted RBP5.58□□□□□ -1.52
SPG11-218ENST00000559754 TCAF1Q9Y4C2 921 aa5.58□□□□□ -1.52
SPG11-218ENST00000559754 ASB1Q9Y576 335 aa5.58□□□□□ -1.52
SPG11-218ENST00000559754 FOXP2O15409 715 aa5.57□□□□□ -1.52
SPG11-218ENST00000559754 ECE1P42892 770 aa5.57□□□□□ -1.52
SPG11-218ENST00000559754 IL13RA1P78552 427 aa5.57□□□□□ -1.52
SPG11-218ENST00000559754 ICAM4Q14773 271 aa5.57□□□□□ -1.52
SPG11-218ENST00000559754 STILQ15468 1287 aa5.57□□□□□ -1.52
SPG11-218ENST00000559754 ARHGAP44Q17R89 818 aa5.57□□□□□ -1.52
SPG11-218ENST00000559754 HS1BP3Q53T59 392 aa5.57□□□□□ -1.52
SPG11-218ENST00000559754 OVCH1Q7RTY7 1134 aa5.57□□□□□ -1.52
SPG11-218ENST00000559754 DDX53Q86TM3 631 aaKnown RBP5.57□□□□□ -1.52
SPG11-218ENST00000559754 NOSTRINQ8IVI9 506 aa5.57□□□□□ -1.52
SPG11-218ENST00000559754 LILRB2Q8N423 598 aa5.57□□□□□ -1.52
SPG11-218ENST00000559754 C2orf69Q8N8R5 385 aa5.57□□□□□ -1.52
SPG11-218ENST00000559754 SCLYQ96I15 445 aa5.57□□□□□ -1.52
SPG11-218ENST00000559754 PATE3B3GLJ2 98 aa5.56□□□□□ -1.52
SPG11-218ENST00000559754 HMGCRP04035 888 aa5.56□□□□□ -1.52
SPG11-218ENST00000559754 ZNF888P0CJ79 500 aaPredicted RBP5.56□□□□□ -1.52
SPG11-218ENST00000559754 SDHAP31040 664 aa5.56□□□□□ -1.52
SPG11-218ENST00000559754 MC4RP32245 332 aa5.56□□□□□ -1.52
SPG11-218ENST00000559754 RAC3P60763 192 aa5.56□□□□□ -1.52
SPG11-218ENST00000559754 FNDC3BQ53EP0 1204 aaKnown RBP5.56□□□□□ -1.52
SPG11-218ENST00000559754 TMEM177Q53S58 311 aa5.56□□□□□ -1.52
SPG11-218ENST00000559754 OTOP2Q7RTS6 562 aa5.56□□□□□ -1.52
SPG11-218ENST00000559754 IGSF22Q8N9C0 903 aa5.56□□□□□ -1.52
SPG11-218ENST00000559754 GIMAP8Q8ND71 665 aaPredicted RBP5.56□□□□□ -1.52
SPG11-218ENST00000559754 HIPK4Q8NE63 616 aa5.56□□□□□ -1.52
SPG11-218ENST00000559754 CALML6Q8TD86 181 aa5.56□□□□□ -1.52
SPG11-218ENST00000559754 PTPN18Q99952 460 aa5.56□□□□□ -1.52
SPG11-218ENST00000559754 ZDHHC5Q9C0B5 715 aa5.56□□□□□ -1.52
SPG11-218ENST00000559754 KLC2Q9H0B6 622 aa5.56□□□□□ -1.52
SPG11-218ENST00000559754 MSL2Q9HCI7 577 aa5.56□□□□□ -1.52
SPG11-218ENST00000559754 TRIM39Q9HCM9 518 aa5.56□□□□□ -1.52
SPG11-218ENST00000559754 CD248Q9HCU0 757 aa5.56□□□□□ -1.52
SPG11-218ENST00000559754 TSC22D4Q9Y3Q8 395 aa5.56□□□□□ -1.52
SPG11-218ENST00000559754 B3GALT1Q9Y5Z6 326 aa5.56□□□□□ -1.52
SPG11-218ENST00000559754 MMEP08473 750 aa5.55□□□□□ -1.52
SPG11-218ENST00000559754 KCNA6P17658 529 aa5.55□□□□□ -1.52
SPG11-218ENST00000559754 SELENOPP49908 381 aa5.55□□□□□ -1.52
SPG11-218ENST00000559754 BMS1Q14692 1282 aaKnown RBP5.55□□□□□ -1.52
SPG11-218ENST00000559754 SEC23AQ15436 765 aa5.55□□□□□ -1.52
SPG11-218ENST00000559754 FGD2Q7Z6J4 655 aa5.55□□□□□ -1.52
SPG11-218ENST00000559754 ASB15Q8WXK1 588 aa5.55□□□□□ -1.52
SPG11-218ENST00000559754 DLG3Q92796 817 aa5.55□□□□□ -1.52
SPG11-218ENST00000559754 NEIL1Q96FI4 390 aaPredicted RBP5.55□□□□□ -1.52
SPG11-218ENST00000559754 DRC1Q96MC2 740 aa5.55□□□□□ -1.52
SPG11-218ENST00000559754 GBP4Q96PP9 640 aa5.55□□□□□ -1.52
SPG11-218ENST00000559754 LRRC37BQ96QE4 947 aa5.55□□□□□ -1.52
SPG11-218ENST00000559754 BOCQ9BWV1 1114 aa5.55□□□□□ -1.52
SPG11-218ENST00000559754 OR10A5Q9H207 317 aa5.55□□□□□ -1.52
SPG11-218ENST00000559754 UCKL1Q9NWZ5 548 aa5.55□□□□□ -1.52
SPG11-218ENST00000559754 A0A0G2JNJ9 132 aa5.54□□□□□ -1.52
SPG11-218ENST00000559754 ZNF623O75123 536 aa5.54□□□□□ -1.52
SPG11-218ENST00000559754 MPIG6BO95866 241 aa5.54□□□□□ -1.52
SPG11-218ENST00000559754 ASLP04424 464 aa5.54□□□□□ -1.52
SPG11-218ENST00000559754 IGFALSP35858 605 aa5.54□□□□□ -1.52
SPG11-218ENST00000559754 ADCY8P40145 1251 aa5.54□□□□□ -1.52
SPG11-218ENST00000559754 KCNQ1P51787 676 aa5.54□□□□□ -1.52
SPG11-218ENST00000559754 RRADP55042 308 aa5.54□□□□□ -1.52
SPG11-218ENST00000559754 IRF9Q00978 393 aa5.54□□□□□ -1.52
SPG11-218ENST00000559754 MAP3K12Q12852 859 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms