RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 RARRES1P49788 294 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 CASP5P51878 434 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 FSTL1Q12841 308 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 PPP4R3CPQ6ZMV5 832 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 CREBRFQ8IUR6 639 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 CCDC112Q8NEF3 446 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 CEP63Q96MT8 703 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 PARVGQ9HBI0 331 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 ANKEF1Q9NU02 776 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 DNAJC25-GNG10A0A024R161 153 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 CELF2O95319 508 aaKnown RBP14.04□□□□□ -0.16
USP3-213ENST00000559711 YWHABP31946 246 aaKnown RBP14.04□□□□□ -0.16
USP3-213ENST00000559711 HOXD13P35453 343 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 KCNJ6P48051 423 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 ERVK-9P63128 1117 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 ERVK-24P63145 666 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 UBXN1Q04323 297 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 UGCGQ16739 394 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 KNOP1Q1ED39 458 aaKnown RBP14.04□□□□□ -0.16
USP3-213ENST00000559711 EDRF1Q3B7T1 1238 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 PADI6Q6TGC4 694 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 C17orf53Q8N3J3 647 aaPredicted RBP14.04□□□□□ -0.16
USP3-213ENST00000559711 TC2NQ8N9U0 490 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 EEF2KMTQ96G04 330 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 FIZ1Q96SL8 496 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 BCAS3Q9H6U6 928 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 JPH1Q9HDC5 661 aaPredicted RBP14.04□□□□□ -0.16
USP3-213ENST00000559711 KCND1Q9NSA2 647 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 SLC9A2Q9UBY0 812 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 TRAF3IP3Q9Y228 551 aa14.04□□□□□ -0.16
USP3-213ENST00000559711 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.04□□□□□ -0.16
USP3-213ENST00000559711 SFI1A8K8P3 1242 aa14.03□□□□□ -0.16
USP3-213ENST00000559711 B4DLN1 442 aa14.03□□□□□ -0.16
USP3-213ENST00000559711 PDHXO00330 501 aa14.03□□□□□ -0.16
USP3-213ENST00000559711 EIF3DO15371 548 aaKnown RBP eCLIP14.03□□□□□ -0.16
USP3-213ENST00000559711 NRDCO43847 1150 aa14.03□□□□□ -0.16
USP3-213ENST00000559711 DKC1O60832 514 aaKnown RBP eCLIP14.03□□□□□ -0.16
USP3-213ENST00000559711 TPM2P07951 284 aa14.03□□□□□ -0.16
USP3-213ENST00000559711 DNM2P50570 870 aa14.03□□□□□ -0.16
USP3-213ENST00000559711 SP2Q02086 613 aa14.03□□□□□ -0.16
USP3-213ENST00000559711 MAPK7Q13164 816 aa14.03□□□□□ -0.16
USP3-213ENST00000559711 MIIPQ5JXC2 388 aa14.03□□□□□ -0.16
USP3-213ENST00000559711 ABHD15Q6UXT9 468 aa14.03□□□□□ -0.16
USP3-213ENST00000559711 ANKRD23Q86SG2 305 aa14.03□□□□□ -0.16
USP3-213ENST00000559711 PPFIBP1Q86W92 1011 aa14.03□□□□□ -0.16
USP3-213ENST00000559711 NELFCDQ8IXH7 590 aa14.03□□□□□ -0.16
USP3-213ENST00000559711 MYCT1Q8N699 235 aa14.03□□□□□ -0.16
USP3-213ENST00000559711 BRI3BPQ8WY22 251 aa14.03□□□□□ -0.16
USP3-213ENST00000559711 TIPINQ9BVW5 301 aa14.03□□□□□ -0.16
USP3-213ENST00000559711 MRPL44Q9H9J2 332 aaKnown RBP14.03□□□□□ -0.16
USP3-213ENST00000559711 POLD4Q9HCU8 107 aa14.03□□□□□ -0.16
USP3-213ENST00000559711 CCL15-CCL14A0A0B4J2E2 113 aa14.02□□□□□ -0.16
USP3-213ENST00000559711 LOC102724159A0A0B4J2E5 919 aa14.02□□□□□ -0.16
USP3-213ENST00000559711 BTBD19C9JJ37 291 aa14.02□□□□□ -0.16
USP3-213ENST00000559711 AKR1B15C9JRZ8 316 aaPredicted RBP14.02□□□□□ -0.16
USP3-213ENST00000559711 PDXKO00764 312 aa14.02□□□□□ -0.16
USP3-213ENST00000559711 ATG7O95352 703 aa14.02□□□□□ -0.16
USP3-213ENST00000559711 GNA14O95837 355 aa14.02□□□□□ -0.16
USP3-213ENST00000559711 PSAPP07602 524 aa14.02□□□□□ -0.16
USP3-213ENST00000559711 ZBTB48P10074 688 aaPredicted RBP14.02□□□□□ -0.16
USP3-213ENST00000559711 MYBP10242 640 aa14.02□□□□□ -0.16
USP3-213ENST00000559711 CYP2C8P10632 490 aa14.02□□□□□ -0.16
USP3-213ENST00000559711 PRKCSHP14314 528 aaPredicted RBP14.02□□□□□ -0.16
USP3-213ENST00000559711 MTIF2P46199 727 aaKnown RBP14.02□□□□□ -0.16
USP3-213ENST00000559711 ACTR2P61160 394 aa14.02□□□□□ -0.16
USP3-213ENST00000559711 RBL2Q08999 1139 aa14.02□□□□□ -0.16
USP3-213ENST00000559711 TRIM14Q14142 442 aa14.02□□□□□ -0.16
USP3-213ENST00000559711 PWP2Q15269 919 aaKnown RBP14.02□□□□□ -0.16
USP3-213ENST00000559711 CCL15Q16663 113 aa14.02□□□□□ -0.16
USP3-213ENST00000559711 SPRYD7Q5W111 196 aa14.02□□□□□ -0.16
USP3-213ENST00000559711 ZNF720Q7Z2F6 126 aa14.02□□□□□ -0.16
USP3-213ENST00000559711 DAW1Q8N136 415 aa14.02□□□□□ -0.16
USP3-213ENST00000559711 FGD4Q96M96 766 aa14.02□□□□□ -0.16
USP3-213ENST00000559711 MMP19Q99542 508 aa14.02□□□□□ -0.16
USP3-213ENST00000559711 SOCS7O14512 581 aa14.01□□□□□ -0.17
USP3-213ENST00000559711 HIP1RO75146 1068 aa14.01□□□□□ -0.17
USP3-213ENST00000559711 OFD1O75665 1012 aa14.01□□□□□ -0.17
USP3-213ENST00000559711 PRPF6O94906 941 aaKnown RBP14.01□□□□□ -0.17
USP3-213ENST00000559711 STBD1O95210 358 aa14.01□□□□□ -0.17
USP3-213ENST00000559711 GCNT3O95395 438 aa14.01□□□□□ -0.17
USP3-213ENST00000559711 TGFB3P10600 412 aa14.01□□□□□ -0.17
USP3-213ENST00000559711 ADKP55263 362 aaKnown RBP14.01□□□□□ -0.17
USP3-213ENST00000559711 MARSP56192 900 aaKnown RBP14.01□□□□□ -0.17
USP3-213ENST00000559711 KCTD2Q14681 263 aa14.01□□□□□ -0.17
USP3-213ENST00000559711 CEP135Q66GS9 1140 aa14.01□□□□□ -0.17
USP3-213ENST00000559711 TMEM139Q8IV31 216 aa14.01□□□□□ -0.17
USP3-213ENST00000559711 GPRC5AQ8NFJ5 357 aa14.01□□□□□ -0.17
USP3-213ENST00000559711 ATP6V0A1Q93050 837 aa14.01□□□□□ -0.17
USP3-213ENST00000559711 PANX2Q96RD6 677 aa14.01□□□□□ -0.17
USP3-213ENST00000559711 MPHOSPH6Q99547 160 aaKnown RBP14.01□□□□□ -0.17
USP3-213ENST00000559711 NOC4LQ9BVI4 516 aaKnown RBP14.01□□□□□ -0.17
USP3-213ENST00000559711 STRA6Q9BX79 667 aa14.01□□□□□ -0.17
USP3-213ENST00000559711 NKRFO15226 690 aaKnown RBP eCLIP14.01□□□□□ -0.17
USP3-213ENST00000559711 ZNF862O60290 1169 aa14.01□□□□□ -0.17
USP3-213ENST00000559711 STX10O60499 249 aa14.01□□□□□ -0.17
USP3-213ENST00000559711 ITGBL1O95965 494 aaPredicted RBP14.01□□□□□ -0.17
USP3-213ENST00000559711 GYPCP04921 128 aa14.01□□□□□ -0.17
USP3-213ENST00000559711 MAPTP10636 758 aaKnown RBP14.01□□□□□ -0.17
USP3-213ENST00000559711 GCLCP48506 637 aaPredicted RBP14.01□□□□□ -0.17
USP3-213ENST00000559711 CCNA1P78396 465 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 782.2 ms