RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 TDP2O95551 362 aa14.25□□□□□ -0.13
LRRC28-214ENST00000559433 DEFB103AP81534 67 aa14.25□□□□□ -0.13
LRRC28-214ENST00000559433 PLEKHG4Q58EX7 1191 aa14.25□□□□□ -0.13
LRRC28-214ENST00000559433 FAM26DQ5JW98 314 aa14.25□□□□□ -0.13
LRRC28-214ENST00000559433 SWSAP1Q6NVH7 229 aa14.25□□□□□ -0.13
LRRC28-214ENST00000559433 PDXDC2PQ6P474 469 aa14.25□□□□□ -0.13
LRRC28-214ENST00000559433 TRAPPC12Q8WVT3 735 aa14.25□□□□□ -0.13
LRRC28-214ENST00000559433 DNAJB3Q8WWF6 145 aa14.25□□□□□ -0.13
LRRC28-214ENST00000559433 SEPT8Q92599 483 aa14.25□□□□□ -0.13
LRRC28-214ENST00000559433 ZBTB10Q96DT7 871 aa14.25□□□□□ -0.13
LRRC28-214ENST00000559433 GJB4Q9NTQ9 266 aa14.25□□□□□ -0.13
LRRC28-214ENST00000559433 SAMM50Q9Y512 469 aa14.25□□□□□ -0.13
LRRC28-214ENST00000559433 EVPLQ92817 2033 aa14.25□□□□□ -0.13
LRRC28-214ENST00000559433 CHRNA1P02708 482 aa14.24□□□□□ -0.13
LRRC28-214ENST00000559433 AMHP03971 560 aa14.24□□□□□ -0.13
LRRC28-214ENST00000559433 CA3P07451 260 aa14.24□□□□□ -0.13
LRRC28-214ENST00000559433 PSAPP07602 524 aa14.24□□□□□ -0.13
LRRC28-214ENST00000559433 INF2Q27J81 1249 aa14.24□□□□□ -0.13
LRRC28-214ENST00000559433 Q4G0T1 1027 aa14.24□□□□□ -0.13
LRRC28-214ENST00000559433 LRCH2Q5VUJ6 765 aa14.24□□□□□ -0.13
LRRC28-214ENST00000559433 TMCO2Q7Z6W1 182 aaPredicted RBP14.24□□□□□ -0.13
LRRC28-214ENST00000559433 RPAINQ86UA6 219 aa14.24□□□□□ -0.13
LRRC28-214ENST00000559433 CKAP2LQ8IYA6 745 aa14.24□□□□□ -0.13
LRRC28-214ENST00000559433 NSUN7Q8NE18 718 aaKnown RBP14.24□□□□□ -0.13
LRRC28-214ENST00000559433 DBF4BQ8NFT6 615 aa14.24□□□□□ -0.13
LRRC28-214ENST00000559433 ATP8B4Q8TF62 1192 aa14.24□□□□□ -0.13
LRRC28-214ENST00000559433 PPM1EQ8WY54 764 aa14.24□□□□□ -0.13
LRRC28-214ENST00000559433 SLC5A5Q92911 643 aa14.24□□□□□ -0.13
LRRC28-214ENST00000559433 RIT2Q99578 217 aa14.24□□□□□ -0.13
LRRC28-214ENST00000559433 TEKT3Q9BXF9 490 aa14.24□□□□□ -0.13
LRRC28-214ENST00000559433 OSBPL7Q9BZF2 842 aa14.24□□□□□ -0.13
LRRC28-214ENST00000559433 FAM49AQ9H0Q0 323 aaPredicted RBP14.24□□□□□ -0.13
LRRC28-214ENST00000559433 PCDHA10Q9Y5I2 948 aa14.24□□□□□ -0.13
LRRC28-214ENST00000559433 CYP3A7-CYP3A51PA0A087WV96 503 aa14.23□□□□□ -0.13
LRRC28-214ENST00000559433 WDR64B1ANS9 1081 aa14.23□□□□□ -0.13
LRRC28-214ENST00000559433 CHMP2AO43633 222 aa14.23□□□□□ -0.13
LRRC28-214ENST00000559433 HBP1O60381 514 aa14.23□□□□□ -0.13
LRRC28-214ENST00000559433 JAK2O60674 1132 aa14.23□□□□□ -0.13
LRRC28-214ENST00000559433 RPLP2P05387 115 aaKnown RBP14.23□□□□□ -0.13
LRRC28-214ENST00000559433 FDPSP14324 419 aaKnown RBP14.23□□□□□ -0.13
LRRC28-214ENST00000559433 CYP3A7P24462 503 aa14.23□□□□□ -0.13
LRRC28-214ENST00000559433 MGAT3Q09327 533 aa14.23□□□□□ -0.13
LRRC28-214ENST00000559433 LETM2Q2VYF4 491 aa14.23□□□□□ -0.13
LRRC28-214ENST00000559433 MTHFD1LQ6UB35 978 aa14.23□□□□□ -0.13
LRRC28-214ENST00000559433 MOXD1Q6UVY6 613 aa14.23□□□□□ -0.13
LRRC28-214ENST00000559433 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.23□□□□□ -0.13
LRRC28-214ENST00000559433 OXER1Q8TDS5 423 aa14.23□□□□□ -0.13
LRRC28-214ENST00000559433 GJA10Q969M2 543 aa14.23□□□□□ -0.13
LRRC28-214ENST00000559433 RAD9AQ99638 391 aa14.23□□□□□ -0.13
LRRC28-214ENST00000559433 BRMS1Q9HCU9 246 aa14.23□□□□□ -0.13
LRRC28-214ENST00000559433 GABBR1Q9UBS5 961 aa14.23□□□□□ -0.13
LRRC28-214ENST00000559433 LIMCH1Q9UPQ0 1083 aa14.23□□□□□ -0.13
LRRC28-214ENST00000559433 PCDHA2Q9Y5H9 948 aa14.23□□□□□ -0.13
LRRC28-214ENST00000559433 COL1A2P08123 1366 aa14.22□□□□□ -0.13
LRRC28-214ENST00000559433 EYSQ5T1H1 3165 aa14.22□□□□□ -0.13
LRRC28-214ENST00000559433 IGSF9BQ9UPX0 1349 aa14.22□□□□□ -0.13
LRRC28-214ENST00000559433 M0QZ92 97 aa14.22□□□□□ -0.13
LRRC28-214ENST00000559433 DLL1O00548 723 aa14.22□□□□□ -0.13
LRRC28-214ENST00000559433 GTPBP6O43824 516 aaPredicted RBP14.22□□□□□ -0.13
LRRC28-214ENST00000559433 GHRP10912 638 aa14.22□□□□□ -0.13
LRRC28-214ENST00000559433 KRT2P35908 639 aa14.22□□□□□ -0.13
LRRC28-214ENST00000559433 FOSBP53539 338 aa14.22□□□□□ -0.13
LRRC28-214ENST00000559433 MRPS6P82932 125 aaKnown RBP14.22□□□□□ -0.13
LRRC28-214ENST00000559433 ZNF484Q5JVG2 852 aa14.22□□□□□ -0.13
LRRC28-214ENST00000559433 IER5Q5VY09 327 aa14.22□□□□□ -0.13
LRRC28-214ENST00000559433 FAM117BQ6P1L5 589 aa14.22□□□□□ -0.13
LRRC28-214ENST00000559433 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.22□□□□□ -0.13
LRRC28-214ENST00000559433 PIK3AP1Q6ZUJ8 805 aa14.22□□□□□ -0.13
LRRC28-214ENST00000559433 TRMT1LQ7Z2T5 733 aaKnown RBP14.22□□□□□ -0.13
LRRC28-214ENST00000559433 NEK8Q86SG6 692 aa14.22□□□□□ -0.13
LRRC28-214ENST00000559433 BBXQ8WY36 941 aaPredicted RBP14.22□□□□□ -0.13
LRRC28-214ENST00000559433 APBB2Q92870 758 aa14.22□□□□□ -0.13
LRRC28-214ENST00000559433 MBOAT7Q96N66 472 aa14.22□□□□□ -0.13
LRRC28-214ENST00000559433 IFIH1Q9BYX4 1025 aaKnown RBP14.22□□□□□ -0.13
LRRC28-214ENST00000559433 TSPYL2Q9H2G4 693 aaPredicted RBP14.22□□□□□ -0.13
LRRC28-214ENST00000559433 UNC45AQ9H3U1 944 aa14.22□□□□□ -0.13
LRRC28-214ENST00000559433 DISC1Q9NRI5 854 aa14.22□□□□□ -0.13
LRRC28-214ENST00000559433 CHD7Q9P2D1 2997 aa14.22□□□□□ -0.13
LRRC28-214ENST00000559433 DDX25Q9UHL0 483 aaKnown RBP14.22□□□□□ -0.13
LRRC28-214ENST00000559433 MAFBQ9Y5Q3 323 aaPredicted RBP14.22□□□□□ -0.13
LRRC28-214ENST00000559433 CDY2AQ9Y6F7 541 aa14.22□□□□□ -0.13
LRRC28-214ENST00000559433 COL4A4P53420 1690 aaPredicted RBP14.22□□□□□ -0.13
LRRC28-214ENST00000559433 SLC37A4O43826 429 aa14.21□□□□□ -0.13
LRRC28-214ENST00000559433 ATP4AP20648 1035 aa14.21□□□□□ -0.13
LRRC28-214ENST00000559433 KLRC1P26715 233 aa14.21□□□□□ -0.13
LRRC28-214ENST00000559433 SFNP31947 248 aa14.21□□□□□ -0.13
LRRC28-214ENST00000559433 JAK3P52333 1124 aa14.21□□□□□ -0.13
LRRC28-214ENST00000559433 TMEM62Q0P6H9 643 aa14.21□□□□□ -0.13
LRRC28-214ENST00000559433 ST3GAL1Q11201 340 aa14.21□□□□□ -0.13
LRRC28-214ENST00000559433 TRIM29Q14134 588 aa14.21□□□□□ -0.13
LRRC28-214ENST00000559433 LPIN1Q14693 890 aa14.21□□□□□ -0.13
LRRC28-214ENST00000559433 CCDC85BQ15834 202 aaPredicted RBP14.21□□□□□ -0.13
LRRC28-214ENST00000559433 CCDC83Q8IWF9 413 aa14.21□□□□□ -0.13
LRRC28-214ENST00000559433 MYOCDQ8IZQ8 938 aa14.21□□□□□ -0.13
LRRC28-214ENST00000559433 ETNPPLQ8TBG4 499 aa14.21□□□□□ -0.13
LRRC28-214ENST00000559433 ARNTL2Q8WYA1 636 aa14.21□□□□□ -0.13
LRRC28-214ENST00000559433 FAM167AQ96KS9 214 aa14.21□□□□□ -0.13
LRRC28-214ENST00000559433 KIF2CQ99661 725 aa14.21□□□□□ -0.13
LRRC28-214ENST00000559433 CERS4Q9HA82 394 aa14.21□□□□□ -0.13
LRRC28-214ENST00000559433 TRPV2Q9Y5S1 764 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms