RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 FAM160B1Q5W0V3 765 aa16.6■□□□□ 0.25
SNRPA1-207ENST00000559309 KRT79Q5XKE5 535 aa16.6■□□□□ 0.25
SNRPA1-207ENST00000559309 ANO5Q75V66 913 aa16.6■□□□□ 0.25
SNRPA1-207ENST00000559309 BANK1Q8NDB2 785 aa16.6■□□□□ 0.25
SNRPA1-207ENST00000559309 ERMNQ8TAM6 284 aa16.6■□□□□ 0.25
SNRPA1-207ENST00000559309 SNX29Q8TEQ0 813 aa16.6■□□□□ 0.25
SNRPA1-207ENST00000559309 ATP8B4Q8TF62 1192 aa16.6■□□□□ 0.25
SNRPA1-207ENST00000559309 ATP6V0A1Q93050 837 aa16.6■□□□□ 0.25
SNRPA1-207ENST00000559309 NIFKQ9BYG3 293 aaKnown RBP16.6■□□□□ 0.25
SNRPA1-207ENST00000559309 RNPEPQ9H4A4 650 aa16.6■□□□□ 0.25
SNRPA1-207ENST00000559309 A0A1W2PQ45 241 aaPredicted RBP16.59■□□□□ 0.25
SNRPA1-207ENST00000559309 A0A1W2PQY0 241 aa16.59■□□□□ 0.25
SNRPA1-207ENST00000559309 POTEB3A0JP26 581 aa16.59■□□□□ 0.25
SNRPA1-207ENST00000559309 DKC1O60832 514 aaKnown RBP eCLIP16.59■□□□□ 0.25
SNRPA1-207ENST00000559309 PSEN2P49810 448 aa16.59■□□□□ 0.25
SNRPA1-207ENST00000559309 CTTNQ14247 550 aaKnown RBP16.59■□□□□ 0.25
SNRPA1-207ENST00000559309 SNX17Q15036 470 aa16.59■□□□□ 0.25
SNRPA1-207ENST00000559309 XKR3Q5GH77 459 aa16.59■□□□□ 0.25
SNRPA1-207ENST00000559309 SPECC1Q5M775 1068 aa16.59■□□□□ 0.25
SNRPA1-207ENST00000559309 POTEBQ6S5H4 581 aa16.59■□□□□ 0.25
SNRPA1-207ENST00000559309 CXCL17Q6UXB2 119 aa16.59■□□□□ 0.25
SNRPA1-207ENST00000559309 KCNK18Q7Z418 384 aa16.59■□□□□ 0.25
SNRPA1-207ENST00000559309 CABP7Q86V35 215 aa16.59■□□□□ 0.25
SNRPA1-207ENST00000559309 ENGASEQ8NFI3 743 aa16.59■□□□□ 0.25
SNRPA1-207ENST00000559309 BBXQ8WY36 941 aaPredicted RBP16.59■□□□□ 0.25
SNRPA1-207ENST00000559309 LMBRD1Q9NUN5 540 aa16.59■□□□□ 0.25
SNRPA1-207ENST00000559309 BLOC1S4Q9NUP1 217 aa16.59■□□□□ 0.25
SNRPA1-207ENST00000559309 DBR1Q9UK59 544 aaKnown RBP16.59■□□□□ 0.25
SNRPA1-207ENST00000559309 SAMM50Q9Y512 469 aa16.59■□□□□ 0.25
SNRPA1-207ENST00000559309 KDM3AQ9Y4C1 1321 aa16.59■□□□□ 0.25
SNRPA1-207ENST00000559309 CEP290O15078 2479 aa16.59■□□□□ 0.25
SNRPA1-207ENST00000559309 DNAH12Q6ZR08 3092 aa16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 GADD45BO75293 160 aaPredicted RBP16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 MYCP01106 439 aaPredicted RBP16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 OATP04181 439 aa16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 MYL3P08590 195 aa16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 CCT6AP40227 531 aaKnown RBP16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 UBA7P41226 1012 aa16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 CDK7P50613 346 aa16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 PSMC6P62333 389 aa16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 PRKCEQ02156 737 aa16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 CYP4A11Q02928 519 aa16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 HIC1Q14526 733 aa16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 MFSD10Q14728 455 aa16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 CSPP1Q1MSJ5 1256 aa16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 UTP14CQ5TAP6 766 aaKnown RBP16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 PDXDC2PQ6P474 469 aa16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 FAM167AQ96KS9 214 aa16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 CTAGE1Q96RT6 745 aa16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 TMEM106CQ9BVX2 250 aa16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 KATNAL1Q9BW62 490 aa16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 SEZ6LQ9BYH1 1024 aa16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 NT5C3AQ9H0P0 336 aa16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 GOLPH3LQ9H4A5 285 aa16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 AZI2Q9H6S1 392 aa16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 PDLIM7Q9NR12 457 aa16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 ANKEF1Q9NU02 776 aa16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 ZNF215Q9UL58 517 aaPredicted RBP16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 COL1A2P08123 1366 aa16.58■□□□□ 0.24
SNRPA1-207ENST00000559309 IGKV6-21A0A0C4DH24 114 aa16.57■□□□□ 0.24
SNRPA1-207ENST00000559309 KBTBD13C9JR72 458 aa16.57■□□□□ 0.24
SNRPA1-207ENST00000559309 ZBTB39O15060 712 aa16.57■□□□□ 0.24
SNRPA1-207ENST00000559309 PTPN11Q06124 597 aaPredicted RBP16.57■□□□□ 0.24
SNRPA1-207ENST00000559309 SNW1Q13573 536 aaKnown RBP16.57■□□□□ 0.24
SNRPA1-207ENST00000559309 KARSQ15046 597 aaKnown RBP16.57■□□□□ 0.24
SNRPA1-207ENST00000559309 KIAA0753Q2KHM9 967 aa16.57■□□□□ 0.24
SNRPA1-207ENST00000559309 MARCH8Q5T0T0 291 aa16.57■□□□□ 0.24
SNRPA1-207ENST00000559309 NFRKBQ6P4R8 1299 aa16.57■□□□□ 0.24
SNRPA1-207ENST00000559309 POTEGQ6S5H5 508 aa16.57■□□□□ 0.24
SNRPA1-207ENST00000559309 LINC01465Q8N7H1 131 aa16.57■□□□□ 0.24
SNRPA1-207ENST00000559309 GBP4Q96PP9 640 aa16.57■□□□□ 0.24
SNRPA1-207ENST00000559309 NACC1Q96RE7 527 aa16.57■□□□□ 0.24
SNRPA1-207ENST00000559309 PPME1Q9Y570 386 aa16.57■□□□□ 0.24
SNRPA1-207ENST00000559309 MBLAC1A4D2B0 266 aaPredicted RBP16.56■□□□□ 0.24
SNRPA1-207ENST00000559309 BACH1O14867 736 aa16.56■□□□□ 0.24
SNRPA1-207ENST00000559309 HBP1O60381 514 aa16.56■□□□□ 0.24
SNRPA1-207ENST00000559309 TFRCP02786 760 aaKnown RBP16.56■□□□□ 0.24
SNRPA1-207ENST00000559309 PFKFB1P16118 471 aa16.56■□□□□ 0.24
SNRPA1-207ENST00000559309 PLCG1P19174 1290 aa16.56■□□□□ 0.24
SNRPA1-207ENST00000559309 YWHABP31946 246 aaKnown RBP16.56■□□□□ 0.24
SNRPA1-207ENST00000559309 RARRES1P49788 294 aa16.56■□□□□ 0.24
SNRPA1-207ENST00000559309 NBPF20Q3BBV1 942 aa16.56■□□□□ 0.24
SNRPA1-207ENST00000559309 TPH2Q8IWU9 490 aa16.56■□□□□ 0.24
SNRPA1-207ENST00000559309 FMR1NBQ8N0W7 255 aaPredicted RBP16.56■□□□□ 0.24
SNRPA1-207ENST00000559309 DIS3LQ8TF46 1054 aaKnown RBP16.56■□□□□ 0.24
SNRPA1-207ENST00000559309 MRPS27Q92552 414 aaKnown RBP16.56■□□□□ 0.24
SNRPA1-207ENST00000559309 GLG1Q92896 1179 aa16.56■□□□□ 0.24
SNRPA1-207ENST00000559309 DDX19AQ9NUU7 478 aaKnown RBP16.56■□□□□ 0.24
SNRPA1-207ENST00000559309 GTF2IRD1Q9UHL9 959 aa16.56■□□□□ 0.24
SNRPA1-207ENST00000559309 KIAA1024Q9UPX6 916 aa16.56■□□□□ 0.24
SNRPA1-207ENST00000559309 NRCAMQ92823 1304 aa16.55■□□□□ 0.24
SNRPA1-207ENST00000559309 EYA4O95677 639 aa16.55■□□□□ 0.24
SNRPA1-207ENST00000559309 INSRRP14616 1297 aa16.55■□□□□ 0.24
SNRPA1-207ENST00000559309 SLC12A3P55017 1021 aa16.55■□□□□ 0.24
SNRPA1-207ENST00000559309 UBE2HP62256 183 aa16.55■□□□□ 0.24
SNRPA1-207ENST00000559309 ZNF484Q5JVG2 852 aa16.55■□□□□ 0.24
SNRPA1-207ENST00000559309 CALML4Q96GE6 196 aa16.55■□□□□ 0.24
SNRPA1-207ENST00000559309 GLT1D1Q96MS3 346 aa16.55■□□□□ 0.24
SNRPA1-207ENST00000559309 STK17AQ9UEE5 414 aa16.55■□□□□ 0.24
SNRPA1-207ENST00000559309 KCNH3Q9ULD8 1083 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms