RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, human

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABPB1-208	ENST00000558970	KRT79	Q5XKE5	535 aa		13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	HAUS3	Q68CZ6	603 aa		13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	PLA2G4F	Q68DD2	849 aa		13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	CABP7	Q86V35	215 aa		13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	C7orf31	Q8N865	590 aa		13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	RDM1	Q8NG50	284 aa		13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	KCNG4	Q8TDN1	519 aa		13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	SYMPK	Q92797	1274 aa	Known RBP	13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	ATP6V0A1	Q93050	837 aa		13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	CDK5RAP3	Q96JB5	506 aa		13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	KATNAL1	Q9BW62	490 aa		13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	PANK2	Q9BZ23	570 aa		13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	HDAC6	Q9UBN7	1215 aa		13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	ATP11B	Q9Y2G3	1177 aa		13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	SRPRB	Q9Y5M8	271 aa	Known RBP	13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	GRIN2D	O15399	1336 aa		13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970		A0A0U1RQG5	324 aa	Predicted RBP	13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	DDX11L8	A8MPP1	907 aa		13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	PQBP1	O60828	265 aa	Known RBP	13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	CABYR	O75952	493 aa		13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	SLITRK3	O94933	977 aa		13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	OAT	P04181	439 aa		13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	SPATA31C1	P0DKV0	1188 aa		13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	COL6A1	P12109	1028 aa		13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	LONP1	P36776	959 aa	Known RBP	13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	UBA7	P41226	1012 aa		13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	PSMC5	P62195	406 aa		13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	ZNF200	P98182	395 aa	Predicted RBP	13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	PDIA5	Q14554	519 aa		13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	KARS	Q15046	597 aa	Known RBP	13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	ECM1	Q16610	540 aa		13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	LRRC26	Q2I0M4	334 aa		13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	MTERF2	Q49AM1	385 aa		13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	PLPPR4	Q7Z2D5	763 aa		13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	CATSPER3	Q86XQ3	398 aa		13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	AFAP1L1	Q8TED9	768 aa		13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	PIGO	Q8TEQ8	1089 aa		13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	CCDC43	Q96MW1	224 aa	Known RBP	13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	MMTAG2	Q9BU76	263 aa	Known RBP	13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	DDX19A	Q9NUU7	478 aa	Known RBP	13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	SETD4	Q9NVD3	440 aa		13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	RCOR1	Q9UKL0	485 aa		13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.92	□□□□□ -0.18
GABPB1-208	ENST00000558970	RBAK-RBAKDN	I3L0D1	243 aa		13.91	□□□□□ -0.18
GABPB1-208	ENST00000558970	HAS3	O00219	553 aa		13.91	□□□□□ -0.18
GABPB1-208	ENST00000558970	CUTA	O60888	179 aa		13.91	□□□□□ -0.18
GABPB1-208	ENST00000558970	INSRR	P14616	1297 aa		13.91	□□□□□ -0.18
GABPB1-208	ENST00000558970	PPFIA1	Q13136	1202 aa		13.91	□□□□□ -0.18
GABPB1-208	ENST00000558970	HIC1	Q14526	733 aa		13.91	□□□□□ -0.18
GABPB1-208	ENST00000558970	GRIK4	Q16099	956 aa		13.91	□□□□□ -0.18
GABPB1-208	ENST00000558970	TRIM60	Q495X7	471 aa		13.91	□□□□□ -0.18
GABPB1-208	ENST00000558970	SLC39A5	Q6ZMH5	540 aa		13.91	□□□□□ -0.18
GABPB1-208	ENST00000558970	PDILT	Q8N807	584 aa		13.91	□□□□□ -0.18
GABPB1-208	ENST00000558970	NEK9	Q8TD19	979 aa		13.91	□□□□□ -0.18
GABPB1-208	ENST00000558970	HSD17B14	Q9BPX1	270 aa		13.91	□□□□□ -0.18
GABPB1-208	ENST00000558970	ZSWIM4	Q9H7M6	989 aa		13.91	□□□□□ -0.18
GABPB1-208	ENST00000558970	KIAA1024	Q9UPX6	916 aa		13.91	□□□□□ -0.18
GABPB1-208	ENST00000558970	MYH11	P35749	1972 aa		13.91	□□□□□ -0.18
GABPB1-208	ENST00000558970		E9PMD0	336 aa		13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	ARVCF	O00192	962 aa		13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	RPA1	P27694	616 aa		13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	YWHAB	P31946	246 aa	Known RBP	13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	TXLNA	P40222	546 aa		13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	NPEPPS	P55786	919 aa		13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	RTP1	P59025	263 aa		13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	GRB10	Q13322	594 aa		13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	DHX8	Q14562	1220 aa	Known RBP	13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	GDF6	Q6KF10	455 aa	Predicted RBP	13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	SHC4	Q6S5L8	630 aa		13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	ZNF579	Q8NAF0	562 aa	Known RBP	13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	ATP8B4	Q8TF62	1192 aa		13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	LMBR1	Q8WVP7	490 aa		13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	CALML4	Q96GE6	196 aa		13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	AK8	Q96MA6	479 aa		13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	PNMA5	Q96PV4	448 aa		13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	TRPV6	Q9H1D0	765 aa		13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	TUFT1	Q9NNX1	390 aa		13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	TRMT13	Q9NUP7	481 aa	Known RBP	13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	NOD1	Q9Y239	953 aa		13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	SI	P14410	1827 aa		13.9	□□□□□ -0.18
GABPB1-208	ENST00000558970	TRIOBP	Q9H2D6	2365 aa		13.89	□□□□□ -0.19
GABPB1-208	ENST00000558970	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.89	□□□□□ -0.19
GABPB1-208	ENST00000558970	C17orf102	A2RUQ5	167 aa		13.89	□□□□□ -0.19
GABPB1-208	ENST00000558970	B4GALT4	O60513	344 aa		13.89	□□□□□ -0.19
GABPB1-208	ENST00000558970	DKC1	O60832	514 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
GABPB1-208	ENST00000558970	SSB	P05455	408 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
GABPB1-208	ENST00000558970	PLCG1	P19174	1290 aa		13.89	□□□□□ -0.19
GABPB1-208	ENST00000558970	SLC26A2	P50443	739 aa		13.89	□□□□□ -0.19
GABPB1-208	ENST00000558970	XKR9	Q5GH70	373 aa		13.89	□□□□□ -0.19
GABPB1-208	ENST00000558970	XKR3	Q5GH77	459 aa		13.89	□□□□□ -0.19
GABPB1-208	ENST00000558970	ANO5	Q75V66	913 aa		13.89	□□□□□ -0.19
GABPB1-208	ENST00000558970	KCNK18	Q7Z418	384 aa		13.89	□□□□□ -0.19
GABPB1-208	ENST00000558970	BBX	Q8WY36	941 aa	Predicted RBP	13.89	□□□□□ -0.19
GABPB1-208	ENST00000558970	FAM167A	Q96KS9	214 aa		13.89	□□□□□ -0.19
GABPB1-208	ENST00000558970	CEP170P1	Q96L14	293 aa		13.89	□□□□□ -0.19
GABPB1-208	ENST00000558970	NRBP2	Q9NSY0	501 aa		13.89	□□□□□ -0.19

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