RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 MYL3P08590 195 aa6.91□□□□□ -1.3
CTDSPL2-204ENST00000558966 UBA1P22314 1058 aaKnown RBP6.91□□□□□ -1.3
CTDSPL2-204ENST00000558966 PDIA3P30101 505 aaKnown RBP6.91□□□□□ -1.3
CTDSPL2-204ENST00000558966 SLC19A1P41440 591 aa6.91□□□□□ -1.3
CTDSPL2-204ENST00000558966 NAPAP54920 295 aa6.91□□□□□ -1.3
CTDSPL2-204ENST00000558966 SP2Q02086 613 aa6.91□□□□□ -1.3
CTDSPL2-204ENST00000558966 PPP1R13LQ8WUF5 828 aa6.91□□□□□ -1.3
CTDSPL2-204ENST00000558966 CUL5Q93034 780 aa6.91□□□□□ -1.3
CTDSPL2-204ENST00000558966 MRGPRX2Q96LB1 330 aa6.91□□□□□ -1.3
CTDSPL2-204ENST00000558966 LBHD1Q9BQE6 289 aaPredicted RBP6.91□□□□□ -1.3
CTDSPL2-204ENST00000558966 PSTPIP2Q9H939 334 aa6.91□□□□□ -1.3
CTDSPL2-204ENST00000558966 NCOA5Q9HCD5 579 aaKnown RBP6.91□□□□□ -1.3
CTDSPL2-204ENST00000558966 TMEM39AQ9NV64 488 aa6.91□□□□□ -1.3
CTDSPL2-204ENST00000558966 ZNF358Q9NW07 568 aa6.91□□□□□ -1.3
CTDSPL2-204ENST00000558966 CXXC1Q9P0U4 656 aaPredicted RBP6.91□□□□□ -1.3
CTDSPL2-204ENST00000558966 CYP46A1Q9Y6A2 500 aa6.91□□□□□ -1.3
CTDSPL2-204ENST00000558966 CCDC196A0A1B0GTZ2 297 aa6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 hCG_1984214I3L0E3 225 aa6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 SOX1O00570 391 aaPredicted RBP6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 SORBS3O60504 671 aa6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 B4GALT4O60513 344 aa6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 PPFIA3O75145 1194 aa6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 GGPS1O95749 300 aa6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 CCT2P78371 535 aaKnown RBP6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 NTRK3Q16288 839 aa6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 PKN1Q16512 942 aa6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 PFKFB3Q16875 520 aaPredicted RBP6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 BRDTQ58F21 947 aaPredicted RBP6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 PPP1R26Q5T8A7 1209 aaPredicted RBP6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 PCNX4Q63HM2 1172 aa6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 TDHQ8IZJ6 230 aa6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 ZNF713Q8N859 430 aaPredicted RBP6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 KAT2BQ92831 832 aa6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 PHKBQ93100 1093 aa6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 MTG1Q9BT17 334 aaPredicted RBP6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 MKNK1Q9BUB5 465 aa6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 TRPV6Q9H1D0 765 aa6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 ALDH8A1Q9H2A2 487 aaPredicted RBP6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 BCAS3Q9H6U6 928 aa6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 BARHL2Q9NY43 387 aa6.9□□□□□ -1.3
CTDSPL2-204ENST00000558966 UMODL1Q5DID0 1318 aa6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 SPATA31C2B4DYI2 1134 aa6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 TLR3O15455 904 aaKnown RBP6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 KPNA6O60684 536 aa6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 STAM2O75886 525 aa6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 ADH1CP00326 375 aa6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 TGFB3P10600 412 aa6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 HOXD8P13378 290 aaPredicted RBP6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 SCG2P13521 617 aa6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 RAG1P15918 1043 aa6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 ICAM3P32942 547 aa6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 EPHB4P54760 987 aa6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 DHX9Q08211 1270 aaKnown RBP6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 LAMC2Q13753 1193 aa6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 HSDL1Q3SXM5 330 aa6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 CELF3Q5SZQ8 465 aaKnown RBP6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 XRRA1Q6P2D8 792 aa6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 KCNV1Q6PIU1 500 aa6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 DHX37Q8IY37 1157 aaKnown RBP6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 CCDC116Q8IYX3 515 aa6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 PPTC7Q8NI37 304 aa6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 IL17RAQ96F46 866 aa6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 SEZ6LQ9BYH1 1024 aa6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 RIC8AQ9NPQ8 531 aa6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 RTEL1Q9NZ71 1219 aa6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 PCDHA6Q9UN73 950 aa6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 PCDHA8Q9Y5H6 950 aa6.9□□□□□ -1.31
CTDSPL2-204ENST00000558966 SMCO2A6NFE2 343 aa6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 SPDYE3A6NKU9 549 aa6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 ADAMTS3O15072 1205 aa6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 PRPF3O43395 683 aaKnown RBP6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 FIBPO43427 364 aa6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 TIMP1P01033 207 aa6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 IFNAR1P17181 557 aa6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 ITGB5P18084 799 aa6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 ADCY7P51828 1080 aa6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 GDF10P55107 478 aa6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 ANAPC15P60006 121 aa6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 DGKDQ16760 1214 aa6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 LRIT3Q3SXY7 679 aa6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 GNPTABQ3T906 1256 aa6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 C9orf50Q5SZB4 431 aa6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 CAPN12Q6ZSI9 719 aa6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 ZNF274Q96GC6 653 aaPredicted RBP6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 PGBD1Q96JS3 809 aa6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 NOC4LQ9BVI4 516 aaKnown RBP6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 RNF26Q9BY78 433 aaPredicted RBP6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 PDRG1Q9NUG6 133 aa6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 TRMT13Q9NUP7 481 aaKnown RBP6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 TMEM260Q9NX78 707 aa6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 SERTAD1Q9UHV2 236 aa6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 TELO2Q9Y4R8 837 aa6.89□□□□□ -1.31
CTDSPL2-204ENST00000558966 TRIP12Q14669 1992 aaPredicted RBP6.88□□□□□ -1.31
CTDSPL2-204ENST00000558966 CHD9Q3L8U1 2897 aa6.88□□□□□ -1.31
CTDSPL2-204ENST00000558966 ESYT2A0FGR8 921 aa6.88□□□□□ -1.31
CTDSPL2-204ENST00000558966 SOWAHDA6NJG2 315 aa6.88□□□□□ -1.31
CTDSPL2-204ENST00000558966 HAS3O00219 553 aa6.88□□□□□ -1.31
CTDSPL2-204ENST00000558966 WNT7AO00755 349 aa6.88□□□□□ -1.31
CTDSPL2-204ENST00000558966 LILRA1O75019 489 aa6.88□□□□□ -1.31
CTDSPL2-204ENST00000558966 ABL1P00519 1130 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms