RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 NONOQ15233 471 aaKnown RBP eCLIP12.72□□□□□ -0.37
BMP4-204ENST00000558961 FAM160B1Q5W0V3 765 aa12.72□□□□□ -0.37
BMP4-204ENST00000558961 PPP2R2DQ66LE6 453 aa12.72□□□□□ -0.37
BMP4-204ENST00000558961 POTEBQ6S5H4 581 aa12.72□□□□□ -0.37
BMP4-204ENST00000558961 NSUN7Q8NE18 718 aaKnown RBP12.72□□□□□ -0.37
BMP4-204ENST00000558961 WASF1Q92558 559 aa12.72□□□□□ -0.37
BMP4-204ENST00000558961 APBB2Q92870 758 aa12.72□□□□□ -0.37
BMP4-204ENST00000558961 ZNF302Q9NR11 478 aa12.72□□□□□ -0.37
BMP4-204ENST00000558961 ORC3Q9UBD5 711 aaPredicted RBP12.72□□□□□ -0.37
BMP4-204ENST00000558961 KCNJ14Q9UNX9 436 aa12.72□□□□□ -0.37
BMP4-204ENST00000558961 TRPC6Q9Y210 931 aa12.72□□□□□ -0.37
BMP4-204ENST00000558961 PCDHA2Q9Y5H9 948 aa12.72□□□□□ -0.37
BMP4-204ENST00000558961 EVPLQ92817 2033 aa12.72□□□□□ -0.37
BMP4-204ENST00000558961 RALGAPA2Q2PPJ7 1873 aa12.72□□□□□ -0.37
BMP4-204ENST00000558961 KDM3AQ9Y4C1 1321 aa12.71□□□□□ -0.37
BMP4-204ENST00000558961 SMIM35A0A1B0GVV1 85 aa12.71□□□□□ -0.37
BMP4-204ENST00000558961 WDR64B1ANS9 1081 aa12.71□□□□□ -0.37
BMP4-204ENST00000558961 ZBTB42B2RXF5 422 aa12.71□□□□□ -0.37
BMP4-204ENST00000558961 TDP2O95551 362 aa12.71□□□□□ -0.37
BMP4-204ENST00000558961 CA3P07451 260 aa12.71□□□□□ -0.37
BMP4-204ENST00000558961 PSAPP07602 524 aa12.71□□□□□ -0.37
BMP4-204ENST00000558961 FOSL2P15408 326 aa12.71□□□□□ -0.37
BMP4-204ENST00000558961 ATP4AP20648 1035 aa12.71□□□□□ -0.37
BMP4-204ENST00000558961 PPP4R3AQ6IN85 833 aa12.71□□□□□ -0.37
BMP4-204ENST00000558961 PDXDC2PQ6P474 469 aa12.71□□□□□ -0.37
BMP4-204ENST00000558961 RSPH3Q86UC2 560 aa12.71□□□□□ -0.37
BMP4-204ENST00000558961 NECAB1Q8N987 351 aa12.71□□□□□ -0.37
BMP4-204ENST00000558961 RDM1Q8NG50 284 aa12.71□□□□□ -0.37
BMP4-204ENST00000558961 ETNPPLQ8TBG4 499 aa12.71□□□□□ -0.37
BMP4-204ENST00000558961 DNAJB3Q8WWF6 145 aa12.71□□□□□ -0.37
BMP4-204ENST00000558961 SEPT8Q92599 483 aa12.71□□□□□ -0.37
BMP4-204ENST00000558961 TNFRSF25Q93038 417 aa12.71□□□□□ -0.37
BMP4-204ENST00000558961 IFIH1Q9BYX4 1025 aaKnown RBP12.71□□□□□ -0.37
BMP4-204ENST00000558961 GJB4Q9NTQ9 266 aa12.71□□□□□ -0.37
BMP4-204ENST00000558961 TCEAL9Q9UHQ7 104 aa12.71□□□□□ -0.37
BMP4-204ENST00000558961 PCDHA10Q9Y5I2 948 aa12.71□□□□□ -0.37
BMP4-204ENST00000558961 SQORQ9Y6N5 450 aa12.71□□□□□ -0.37
BMP4-204ENST00000558961 NLRC5Q86WI3 1866 aa12.71□□□□□ -0.37
BMP4-204ENST00000558961 TRANK1O15050 2925 aa12.71□□□□□ -0.38
BMP4-204ENST00000558961 ARID2Q68CP9 1835 aa12.7□□□□□ -0.38
BMP4-204ENST00000558961 KIF28PB7ZC32 967 aa12.7□□□□□ -0.38
BMP4-204ENST00000558961 BACH1O14867 736 aa12.7□□□□□ -0.38
BMP4-204ENST00000558961 ARHGEF15O94989 841 aa12.7□□□□□ -0.38
BMP4-204ENST00000558961 GCFC2P16383 781 aaKnown RBP12.7□□□□□ -0.38
BMP4-204ENST00000558961 SFNP31947 248 aa12.7□□□□□ -0.38
BMP4-204ENST00000558961 JAK3P52333 1124 aa12.7□□□□□ -0.38
BMP4-204ENST00000558961 IGBP1P78318 339 aa12.7□□□□□ -0.38
BMP4-204ENST00000558961 MRPS6P82932 125 aaKnown RBP12.7□□□□□ -0.38
BMP4-204ENST00000558961 BECN1Q14457 450 aa12.7□□□□□ -0.38
BMP4-204ENST00000558961 INF2Q27J81 1249 aa12.7□□□□□ -0.38
BMP4-204ENST00000558961 FBXO47Q5MNV8 452 aa12.7□□□□□ -0.38
BMP4-204ENST00000558961 LRCH2Q5VUJ6 765 aa12.7□□□□□ -0.38
BMP4-204ENST00000558961 SWSAP1Q6NVH7 229 aa12.7□□□□□ -0.38
BMP4-204ENST00000558961 MTHFD1LQ6UB35 978 aa12.7□□□□□ -0.38
BMP4-204ENST00000558961 USP38Q8NB14 1042 aa12.7□□□□□ -0.38
BMP4-204ENST00000558961 MAFAQ8NHW3 353 aaPredicted RBP12.7□□□□□ -0.38
BMP4-204ENST00000558961 TRAPPC12Q8WVT3 735 aa12.7□□□□□ -0.38
BMP4-204ENST00000558961 BBXQ8WY36 941 aaPredicted RBP12.7□□□□□ -0.38
BMP4-204ENST00000558961 TEKT3Q9BXF9 490 aa12.7□□□□□ -0.38
BMP4-204ENST00000558961 KCNMB3Q9NPA1 279 aa12.7□□□□□ -0.38
BMP4-204ENST00000558961 CDY2AQ9Y6F7 541 aa12.7□□□□□ -0.38
BMP4-204ENST00000558961 CCDC194A0A1B0GVG4 234 aa12.69□□□□□ -0.38
BMP4-204ENST00000558961 RBAK-RBAKDNI3L0D1 243 aa12.69□□□□□ -0.38
BMP4-204ENST00000558961 SLC37A4O43826 429 aa12.69□□□□□ -0.38
BMP4-204ENST00000558961 TLL1O43897 1013 aa12.69□□□□□ -0.38
BMP4-204ENST00000558961 ZNF862O60290 1169 aa12.69□□□□□ -0.38
BMP4-204ENST00000558961 GAS7O60861 476 aa12.69□□□□□ -0.38
BMP4-204ENST00000558961 HTRA4P83105 476 aaPredicted RBP12.69□□□□□ -0.38
BMP4-204ENST00000558961 TAP1Q03518 808 aa12.69□□□□□ -0.38
BMP4-204ENST00000558961 LPIN1Q14693 890 aa12.69□□□□□ -0.38
BMP4-204ENST00000558961 ZNF484Q5JVG2 852 aa12.69□□□□□ -0.38
BMP4-204ENST00000558961 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.69□□□□□ -0.38
BMP4-204ENST00000558961 TSHZ1Q6ZSZ6 1077 aa12.69□□□□□ -0.38
BMP4-204ENST00000558961 FAM43BQ6ZT52 329 aaPredicted RBP12.69□□□□□ -0.38
BMP4-204ENST00000558961 NEK8Q86SG6 692 aa12.69□□□□□ -0.38
BMP4-204ENST00000558961 NME8Q8N427 588 aa12.69□□□□□ -0.38
BMP4-204ENST00000558961 SP7Q8TDD2 431 aaPredicted RBP12.69□□□□□ -0.38
BMP4-204ENST00000558961 OXER1Q8TDS5 423 aa12.69□□□□□ -0.38
BMP4-204ENST00000558961 ZBTB10Q96DT7 871 aa12.69□□□□□ -0.38
BMP4-204ENST00000558961 FAM167AQ96KS9 214 aa12.69□□□□□ -0.38
BMP4-204ENST00000558961 UIMC1Q96RL1 719 aa12.69□□□□□ -0.38
BMP4-204ENST00000558961 GAS2L1Q99501 681 aaPredicted RBP12.69□□□□□ -0.38
BMP4-204ENST00000558961 RAD9AQ99638 391 aa12.69□□□□□ -0.38
BMP4-204ENST00000558961 UNC45AQ9H3U1 944 aa12.69□□□□□ -0.38
BMP4-204ENST00000558961 PRDM12Q9H4Q4 367 aa12.69□□□□□ -0.38
BMP4-204ENST00000558961 DISC1Q9NRI5 854 aa12.69□□□□□ -0.38
BMP4-204ENST00000558961 DDX25Q9UHL0 483 aaKnown RBP12.69□□□□□ -0.38
BMP4-204ENST00000558961 LIMCH1Q9UPQ0 1083 aa12.69□□□□□ -0.38
BMP4-204ENST00000558961 TTC3P53804 2025 aa12.69□□□□□ -0.38
BMP4-204ENST00000558961 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.68□□□□□ -0.38
BMP4-204ENST00000558961 LCHNA4D1U4 455 aa12.68□□□□□ -0.38
BMP4-204ENST00000558961 TBX3O15119 743 aa12.68□□□□□ -0.38
BMP4-204ENST00000558961 JAK2O60674 1132 aa12.68□□□□□ -0.38
BMP4-204ENST00000558961 DTNBO60941 627 aa12.68□□□□□ -0.38
BMP4-204ENST00000558961 C22orf31O95567 290 aa12.68□□□□□ -0.38
BMP4-204ENST00000558961 MMP1P03956 469 aa12.68□□□□□ -0.38
BMP4-204ENST00000558961 AMHP03971 560 aa12.68□□□□□ -0.38
BMP4-204ENST00000558961 GHRP10912 638 aa12.68□□□□□ -0.38
BMP4-204ENST00000558961 POU3F3P20264 500 aaPredicted RBP12.68□□□□□ -0.38
BMP4-204ENST00000558961 KLRC1P26715 233 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms