RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 ALPK1Q96QP1 1244 aa7.68□□□□□ -1.18
LRRC28-209ENST00000558861 MRPL4Q9BYD3 311 aaKnown RBP7.68□□□□□ -1.18
LRRC28-209ENST00000558861 KRTAP4-6Q9BYQ5 205 aa7.68□□□□□ -1.18
LRRC28-209ENST00000558861 NDOR1Q9UHB4 597 aa7.68□□□□□ -1.18
LRRC28-209ENST00000558861 SFMBT1Q9UHJ3 866 aa7.68□□□□□ -1.18
LRRC28-209ENST00000558861 CCNL1Q9UK58 526 aaPredicted RBP7.68□□□□□ -1.18
LRRC28-209ENST00000558861 TRAF6Q9Y4K3 522 aa7.68□□□□□ -1.18
LRRC28-209ENST00000558861 MYH14Q7Z406 1995 aaKnown RBP7.68□□□□□ -1.18
LRRC28-209ENST00000558861 COL5A3P25940 1745 aaPredicted RBP7.67□□□□□ -1.18
LRRC28-209ENST00000558861 CLSTN1O94985 981 aa7.67□□□□□ -1.18
LRRC28-209ENST00000558861 ZGLP1P0C6A0 271 aa7.67□□□□□ -1.18
LRRC28-209ENST00000558861 CYP19A1P11511 503 aaPredicted RBP7.67□□□□□ -1.18
LRRC28-209ENST00000558861 LCP1P13796 627 aa7.67□□□□□ -1.18
LRRC28-209ENST00000558861 FUT4P22083 530 aa7.67□□□□□ -1.18
LRRC28-209ENST00000558861 GABREP78334 506 aa7.67□□□□□ -1.18
LRRC28-209ENST00000558861 PABPC4Q13310 644 aaKnown RBP eCLIP7.67□□□□□ -1.18
LRRC28-209ENST00000558861 INF2Q27J81 1249 aa7.67□□□□□ -1.18
LRRC28-209ENST00000558861 DALRD3Q5D0E6 543 aaKnown RBP7.67□□□□□ -1.18
LRRC28-209ENST00000558861 ZMYM1Q5SVZ6 1142 aa7.67□□□□□ -1.18
LRRC28-209ENST00000558861 CYP2R1Q6VVX0 501 aa7.67□□□□□ -1.18
LRRC28-209ENST00000558861 PHF20Q9BVI0 1012 aa7.67□□□□□ -1.18
LRRC28-209ENST00000558861 SLKQ9H2G2 1235 aaPredicted RBP7.67□□□□□ -1.18
LRRC28-209ENST00000558861 TSPYL4Q9UJ04 414 aa7.67□□□□□ -1.18
LRRC28-209ENST00000558861 TAF1LQ8IZX4 1826 aa7.66□□□□□ -1.18
LRRC28-209ENST00000558861 IRS4O14654 1257 aaPredicted RBP7.66□□□□□ -1.18
LRRC28-209ENST00000558861 USP2O75604 605 aaPredicted RBP7.66□□□□□ -1.18
LRRC28-209ENST00000558861 LTBRP36941 435 aa7.66□□□□□ -1.18
LRRC28-209ENST00000558861 GNAI1P63096 354 aa7.66□□□□□ -1.18
LRRC28-209ENST00000558861 KCNAB2Q13303 367 aa7.66□□□□□ -1.18
LRRC28-209ENST00000558861 TRIM61Q5EBN2 209 aa7.66□□□□□ -1.18
LRRC28-209ENST00000558861 E4F1Q66K89 784 aaPredicted RBP7.66□□□□□ -1.18
LRRC28-209ENST00000558861 STYK1Q6J9G0 422 aa7.66□□□□□ -1.18
LRRC28-209ENST00000558861 BRAPQ7Z569 592 aa7.66□□□□□ -1.18
LRRC28-209ENST00000558861 GSTCDQ8NEC7 633 aa7.66□□□□□ -1.18
LRRC28-209ENST00000558861 DCAF4Q8WV16 495 aa7.66□□□□□ -1.18
LRRC28-209ENST00000558861 LINC01599Q8WXQ3 324 aa7.66□□□□□ -1.18
LRRC28-209ENST00000558861 DIO2Q92813 273 aa7.66□□□□□ -1.18
LRRC28-209ENST00000558861 PTPRN2Q92932 1015 aa7.66□□□□□ -1.18
LRRC28-209ENST00000558861 TSR2Q969E8 191 aaKnown RBP7.66□□□□□ -1.18
LRRC28-209ENST00000558861 FMNL2Q96PY5 1086 aa7.66□□□□□ -1.18
LRRC28-209ENST00000558861 TMEM59LQ9UK28 342 aa7.66□□□□□ -1.18
LRRC28-209ENST00000558861 ADAMTS6Q9UKP5 1117 aa7.66□□□□□ -1.18
LRRC28-209ENST00000558861 USP16Q9Y5T5 823 aa7.66□□□□□ -1.18
LRRC28-209ENST00000558861 FANCIQ9NVI1 1328 aa7.66□□□□□ -1.18
LRRC28-209ENST00000558861 C4BP0C0L5 1744 aa7.66□□□□□ -1.18
LRRC28-209ENST00000558861 ANKRD62A6NC57 917 aa7.65□□□□□ -1.18
LRRC28-209ENST00000558861 TBC1D8O95759 1140 aa7.65□□□□□ -1.18
LRRC28-209ENST00000558861 HOXB7P09629 217 aa7.65□□□□□ -1.18
LRRC28-209ENST00000558861 SNRPA1P09661 255 aaKnown RBP7.65□□□□□ -1.18
LRRC28-209ENST00000558861 CRKLP46109 303 aaKnown RBP7.65□□□□□ -1.18
LRRC28-209ENST00000558861 HK2P52789 917 aa7.65□□□□□ -1.18
LRRC28-209ENST00000558861 CALD1Q05682 793 aaKnown RBP7.65□□□□□ -1.18
LRRC28-209ENST00000558861 SLFN5Q08AF3 891 aa7.65□□□□□ -1.18
LRRC28-209ENST00000558861 PLCL1Q15111 1095 aa7.65□□□□□ -1.18
LRRC28-209ENST00000558861 TESK1Q15569 626 aa7.65□□□□□ -1.18
LRRC28-209ENST00000558861 SLC15A2Q16348 729 aa7.65□□□□□ -1.18
LRRC28-209ENST00000558861 FNDC3BQ53EP0 1204 aaKnown RBP7.65□□□□□ -1.18
LRRC28-209ENST00000558861 ZBED9Q6R2W3 1325 aa7.65□□□□□ -1.18
LRRC28-209ENST00000558861 PNPLA7Q6ZV29 1317 aa7.65□□□□□ -1.18
LRRC28-209ENST00000558861 MAMDC2Q7Z304 686 aaPredicted RBP7.65□□□□□ -1.18
LRRC28-209ENST00000558861 DHX37Q8IY37 1157 aaKnown RBP7.65□□□□□ -1.18
LRRC28-209ENST00000558861 TTC5Q8N0Z6 440 aa7.65□□□□□ -1.18
LRRC28-209ENST00000558861 TSPYL6Q8N831 410 aa7.65□□□□□ -1.18
LRRC28-209ENST00000558861 C8orf58Q8NAV2 365 aa7.65□□□□□ -1.18
LRRC28-209ENST00000558861 MMP19Q99542 508 aa7.65□□□□□ -1.18
LRRC28-209ENST00000558861 PDGFDQ9GZP0 370 aaPredicted RBP7.65□□□□□ -1.18
LRRC28-209ENST00000558861 TRIM39Q9HCM9 518 aa7.65□□□□□ -1.18
LRRC28-209ENST00000558861 PLAAQ9Y263 795 aa7.65□□□□□ -1.18
LRRC28-209ENST00000558861 NPFFR2Q9Y5X5 522 aa7.65□□□□□ -1.18
LRRC28-209ENST00000558861 SOS1Q07889 1333 aaPredicted RBP7.64□□□□□ -1.19
LRRC28-209ENST00000558861 TRBV23OR9-2A0A075B6M9 112 aa7.64□□□□□ -1.19
LRRC28-209ENST00000558861 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.64□□□□□ -1.19
LRRC28-209ENST00000558861 FADS2P1A8MWK0 482 aa7.64□□□□□ -1.19
LRRC28-209ENST00000558861 MSCO60682 206 aa7.64□□□□□ -1.19
LRRC28-209ENST00000558861 RFPL3O75679 317 aa7.64□□□□□ -1.19
LRRC28-209ENST00000558861 EIF5P55010 431 aaKnown RBP7.64□□□□□ -1.19
LRRC28-209ENST00000558861 DUSP4Q13115 394 aa7.64□□□□□ -1.19
LRRC28-209ENST00000558861 LRP8Q14114 963 aa7.64□□□□□ -1.19
LRRC28-209ENST00000558861 SLC23A3Q6PIS1 610 aa7.64□□□□□ -1.19
LRRC28-209ENST00000558861 SMIM5Q71RC9 77 aa7.64□□□□□ -1.19
LRRC28-209ENST00000558861 FGD2Q7Z6J4 655 aa7.64□□□□□ -1.19
LRRC28-209ENST00000558861 SLCO6A1Q86UG4 719 aa7.64□□□□□ -1.19
LRRC28-209ENST00000558861 TP53INP2Q8IXH6 220 aa7.64□□□□□ -1.19
LRRC28-209ENST00000558861 NIM1KQ8IY84 436 aa7.64□□□□□ -1.19
LRRC28-209ENST00000558861 RCBTB1Q8NDN9 531 aa7.64□□□□□ -1.19
LRRC28-209ENST00000558861 NINJ1Q92982 152 aa7.64□□□□□ -1.19
LRRC28-209ENST00000558861 JMJD8Q96S16 334 aa7.64□□□□□ -1.19
LRRC28-209ENST00000558861 GPR27Q9NS67 375 aa7.64□□□□□ -1.19
LRRC28-209ENST00000558861 FBXL7Q9UJT9 491 aa7.64□□□□□ -1.19
LRRC28-209ENST00000558861 ZBTB1Q9Y2K1 713 aa7.64□□□□□ -1.19
LRRC28-209ENST00000558861 UBR3Q6ZT12 1888 aa7.64□□□□□ -1.19
LRRC28-209ENST00000558861 TUBGCP6Q96RT7 1819 aa7.64□□□□□ -1.19
LRRC28-209ENST00000558861 C7orf72A4D263 438 aa7.63□□□□□ -1.19
LRRC28-209ENST00000558861 RPS6KA4O75676 772 aa7.63□□□□□ -1.19
LRRC28-209ENST00000558861 DNAJC8O75937 253 aaPredicted RBP7.63□□□□□ -1.19
LRRC28-209ENST00000558861 RASGRP1O95267 797 aa7.63□□□□□ -1.19
LRRC28-209ENST00000558861 WNT11O96014 354 aa7.63□□□□□ -1.19
LRRC28-209ENST00000558861 A1BGP04217 495 aa7.63□□□□□ -1.19
LRRC28-209ENST00000558861 SDSP20132 328 aa7.63□□□□□ -1.19
LRRC28-209ENST00000558861 PROSER3Q2NL68 480 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms