RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 PDXDC2PQ6P474 469 aa13.84□□□□□ -0.19
TPM1-209ENST00000558072 FBXO46Q6PJ61 603 aaPredicted RBP13.84□□□□□ -0.19
TPM1-209ENST00000558072 CKAP2LQ8IYA6 745 aa13.84□□□□□ -0.19
TPM1-209ENST00000558072 PPP1R13LQ8WUF5 828 aa13.84□□□□□ -0.19
TPM1-209ENST00000558072 GLG1Q92896 1179 aa13.84□□□□□ -0.19
TPM1-209ENST00000558072 JPH2Q9BR39 696 aaPredicted RBP13.84□□□□□ -0.19
TPM1-209ENST00000558072 KATNAL1Q9BW62 490 aa13.84□□□□□ -0.19
TPM1-209ENST00000558072 PANK2Q9BZ23 570 aa13.84□□□□□ -0.19
TPM1-209ENST00000558072 HMX1Q9NP08 348 aaPredicted RBP13.84□□□□□ -0.19
TPM1-209ENST00000558072 KBTBD4Q9NVX7 518 aa13.84□□□□□ -0.19
TPM1-209ENST00000558072 ERAP1Q9NZ08 941 aa13.84□□□□□ -0.19
TPM1-209ENST00000558072 GABBR1Q9UBS5 961 aa13.84□□□□□ -0.19
TPM1-209ENST00000558072 SERTAD1Q9UHV2 236 aa13.84□□□□□ -0.19
TPM1-209ENST00000558072 GNEQ9Y223 722 aaKnown RBP13.84□□□□□ -0.19
TPM1-209ENST00000558072 MAFBQ9Y5Q3 323 aaPredicted RBP13.84□□□□□ -0.19
TPM1-209ENST00000558072 POTEB3A0JP26 581 aa13.83□□□□□ -0.2
TPM1-209ENST00000558072 ARHGEF35A5YM69 484 aa13.83□□□□□ -0.2
TPM1-209ENST00000558072 A6NJR5 290 aa13.83□□□□□ -0.2
TPM1-209ENST00000558072 DYNC1LI2O43237 492 aaPredicted RBP13.83□□□□□ -0.2
TPM1-209ENST00000558072 ACTN4O43707 911 aaKnown RBP13.83□□□□□ -0.2
TPM1-209ENST00000558072 GTPBP6O43824 516 aaPredicted RBP13.83□□□□□ -0.2
TPM1-209ENST00000558072 PLA2G4BP0C869 781 aa13.83□□□□□ -0.2
TPM1-209ENST00000558072 HOXD8P13378 290 aaPredicted RBP13.83□□□□□ -0.2
TPM1-209ENST00000558072 NKX3-2P78367 333 aa13.83□□□□□ -0.2
TPM1-209ENST00000558072 CYP4A11Q02928 519 aa13.83□□□□□ -0.2
TPM1-209ENST00000558072 CTTNQ14247 550 aaKnown RBP13.83□□□□□ -0.2
TPM1-209ENST00000558072 POSTNQ15063 836 aa13.83□□□□□ -0.2
TPM1-209ENST00000558072 MAP3K21Q5TCX8 1036 aa13.83□□□□□ -0.2
TPM1-209ENST00000558072 CNNM4Q6P4Q7 775 aa13.83□□□□□ -0.2
TPM1-209ENST00000558072 POTEBQ6S5H4 581 aa13.83□□□□□ -0.2
TPM1-209ENST00000558072 TLK2Q86UE8 772 aa13.83□□□□□ -0.2
TPM1-209ENST00000558072 SYT2Q8N9I0 419 aaPredicted RBP13.83□□□□□ -0.2
TPM1-209ENST00000558072 PNMA5Q96PV4 448 aa13.83□□□□□ -0.2
TPM1-209ENST00000558072 GSDMAQ96QA5 445 aa13.83□□□□□ -0.2
TPM1-209ENST00000558072 PRDM10Q9NQV6 1147 aa13.83□□□□□ -0.2
TPM1-209ENST00000558072 RGL1Q9NZL6 768 aa13.83□□□□□ -0.2
TPM1-209ENST00000558072 IGSF9BQ9UPX0 1349 aa13.83□□□□□ -0.2
TPM1-209ENST00000558072 LOXHD1Q8IVV2 1947 aa13.82□□□□□ -0.2
TPM1-209ENST00000558072 GSTTP1A0A1W2PQM5 241 aa13.82□□□□□ -0.2
TPM1-209ENST00000558072 GAS2O43903 313 aaKnown RBP13.82□□□□□ -0.2
TPM1-209ENST00000558072 CAVIN2O95810 425 aa13.82□□□□□ -0.2
TPM1-209ENST00000558072 MYCNP04198 464 aaPredicted RBP13.82□□□□□ -0.2
TPM1-209ENST00000558072 YWHABP31946 246 aaKnown RBP13.82□□□□□ -0.2
TPM1-209ENST00000558072 PPP1R2P41236 205 aa13.82□□□□□ -0.2
TPM1-209ENST00000558072 GJA9P57773 515 aa13.82□□□□□ -0.2
TPM1-209ENST00000558072 BEX3Q00994 111 aa13.82□□□□□ -0.2
TPM1-209ENST00000558072 HSDL1Q3SXM5 330 aa13.82□□□□□ -0.2
TPM1-209ENST00000558072 COL13A1Q5TAT6 717 aaPredicted RBP13.82□□□□□ -0.2
TPM1-209ENST00000558072 SASS6Q6UVJ0 657 aa13.82□□□□□ -0.2
TPM1-209ENST00000558072 SH3RF1Q7Z6J0 888 aa13.82□□□□□ -0.2
TPM1-209ENST00000558072 TRIML1Q8N9V2 468 aa13.82□□□□□ -0.2
TPM1-209ENST00000558072 PCSK9Q8NBP7 692 aaKnown RBP13.82□□□□□ -0.2
TPM1-209ENST00000558072 BANK1Q8NDB2 785 aa13.82□□□□□ -0.2
TPM1-209ENST00000558072 BBXQ8WY36 941 aaPredicted RBP13.82□□□□□ -0.2
TPM1-209ENST00000558072 SMARCE1Q969G3 411 aa13.82□□□□□ -0.2
TPM1-209ENST00000558072 PAGE5Q96GU1 130 aa13.82□□□□□ -0.2
TPM1-209ENST00000558072 C7orf25Q9BPX7 421 aa13.82□□□□□ -0.2
TPM1-209ENST00000558072 PVALEFA0A1B0GWK0 134 aa13.81□□□□□ -0.2
TPM1-209ENST00000558072 HBP1O60381 514 aa13.81□□□□□ -0.2
TPM1-209ENST00000558072 PGK1P00558 417 aa13.81□□□□□ -0.2
TPM1-209ENST00000558072 OATP04181 439 aa13.81□□□□□ -0.2
TPM1-209ENST00000558072 KRT18P05783 430 aaKnown RBP13.81□□□□□ -0.2
TPM1-209ENST00000558072 CCL5P13501 91 aa13.81□□□□□ -0.2
TPM1-209ENST00000558072 SCP2P22307 547 aa13.81□□□□□ -0.2
TPM1-209ENST00000558072 ABCD1P33897 745 aa13.81□□□□□ -0.2
TPM1-209ENST00000558072 RFC5P40937 340 aa13.81□□□□□ -0.2
TPM1-209ENST00000558072 POTEGQ6S5H5 508 aa13.81□□□□□ -0.2
TPM1-209ENST00000558072 RBM43Q6ZSC3 357 aaKnown RBP13.81□□□□□ -0.2
TPM1-209ENST00000558072 RNF180Q86T96 592 aa13.81□□□□□ -0.2
TPM1-209ENST00000558072 CCDC65Q8IXS2 484 aa13.81□□□□□ -0.2
TPM1-209ENST00000558072 SLC17A8Q8NDX2 589 aa13.81□□□□□ -0.2
TPM1-209ENST00000558072 AFG1LQ8WV93 481 aa13.81□□□□□ -0.2
TPM1-209ENST00000558072 NIFKQ9BYG3 293 aaKnown RBP13.81□□□□□ -0.2
TPM1-209ENST00000558072 SEZ6LQ9BYH1 1024 aa13.81□□□□□ -0.2
TPM1-209ENST00000558072 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.81□□□□□ -0.2
TPM1-209ENST00000558072 UPF3AQ9H1J1 476 aaKnown RBP13.81□□□□□ -0.2
TPM1-209ENST00000558072 KIAA1468Q9P260 1216 aa13.81□□□□□ -0.2
TPM1-209ENST00000558072 DDX20Q9UHI6 824 aaKnown RBP13.81□□□□□ -0.2
TPM1-209ENST00000558072 DACH1Q9UI36 760 aa13.81□□□□□ -0.2
TPM1-209ENST00000558072 A0A087X0B3 334 aa13.8□□□□□ -0.2
TPM1-209ENST00000558072 DGAT1O75907 488 aa13.8□□□□□ -0.2
TPM1-209ENST00000558072 CABYRO75952 493 aa13.8□□□□□ -0.2
TPM1-209ENST00000558072 KIF20AO95235 890 aa13.8□□□□□ -0.2
TPM1-209ENST00000558072 SSBP05455 408 aaKnown RBP eCLIP13.8□□□□□ -0.2
TPM1-209ENST00000558072 MMP3P08254 477 aa13.8□□□□□ -0.2
TPM1-209ENST00000558072 CCDC192P0DO97 292 aa13.8□□□□□ -0.2
TPM1-209ENST00000558072 PRKCEQ02156 737 aa13.8□□□□□ -0.2
TPM1-209ENST00000558072 PSMD2Q13200 908 aa13.8□□□□□ -0.2
TPM1-209ENST00000558072 FSCN1Q16658 493 aaKnown RBP13.8□□□□□ -0.2
TPM1-209ENST00000558072 NAALADL2Q58DX5 795 aa13.8□□□□□ -0.2
TPM1-209ENST00000558072 CT47A1Q5JQC4 288 aaPredicted RBP13.8□□□□□ -0.2
TPM1-209ENST00000558072 ZNF484Q5JVG2 852 aa13.8□□□□□ -0.2
TPM1-209ENST00000558072 UTP14CQ5TAP6 766 aaKnown RBP13.8□□□□□ -0.2
TPM1-209ENST00000558072 TRIM50Q86XT4 487 aa13.8□□□□□ -0.2
TPM1-209ENST00000558072 CCDC60Q8IWA6 550 aaPredicted RBP13.8□□□□□ -0.2
TPM1-209ENST00000558072 ARRDC4Q8NCT1 418 aa13.8□□□□□ -0.2
TPM1-209ENST00000558072 MCPH1Q8NEM0 835 aa13.8□□□□□ -0.2
TPM1-209ENST00000558072 ATP8B4Q8TF62 1192 aa13.8□□□□□ -0.2
TPM1-209ENST00000558072 ZNF333Q96JL9 665 aa13.8□□□□□ -0.2
TPM1-209ENST00000558072 PLIN2Q99541 437 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms