RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ADAM17P78536 824 aa28.67■■■□□ 2.18
SMAD6-202ENST00000557916 PDIA5Q14554 519 aa28.67■■■□□ 2.18
SMAD6-202ENST00000557916 IL17AQ16552 155 aa28.67■■■□□ 2.18
SMAD6-202ENST00000557916 ARL6IP4Q66PJ3 421 aaKnown RBP28.67■■■□□ 2.18
SMAD6-202ENST00000557916 HSD17B14Q9BPX1 270 aa28.67■■■□□ 2.18
SMAD6-202ENST00000557916 LXNQ9BS40 222 aa28.67■■■□□ 2.18
SMAD6-202ENST00000557916 RAB34Q9BZG1 259 aa28.67■■■□□ 2.18
SMAD6-202ENST00000557916 LRWD1Q9UFC0 647 aa28.67■■■□□ 2.18
SMAD6-202ENST00000557916 H0YGN5 161 aa28.66■■■□□ 2.18
SMAD6-202ENST00000557916 SLITRK3O94933 977 aa28.66■■■□□ 2.18
SMAD6-202ENST00000557916 CYP4A11Q02928 519 aa28.66■■■□□ 2.18
SMAD6-202ENST00000557916 CEBPZQ03701 1054 aaKnown RBP28.66■■■□□ 2.18
SMAD6-202ENST00000557916 CTTNQ14247 550 aaKnown RBP28.66■■■□□ 2.18
SMAD6-202ENST00000557916 ZNF484Q5JVG2 852 aa28.66■■■□□ 2.18
SMAD6-202ENST00000557916 TPH2Q8IWU9 490 aa28.66■■■□□ 2.18
SMAD6-202ENST00000557916 ERMNQ8TAM6 284 aa28.66■■■□□ 2.18
SMAD6-202ENST00000557916 NEK9Q8TD19 979 aa28.66■■■□□ 2.18
SMAD6-202ENST00000557916 TRAPPC12Q8WVT3 735 aa28.66■■■□□ 2.18
SMAD6-202ENST00000557916 ZNF396Q96N95 335 aaPredicted RBP28.66■■■□□ 2.18
SMAD6-202ENST00000557916 USP28Q96RU2 1077 aa28.66■■■□□ 2.18
SMAD6-202ENST00000557916 ZDHHC9Q9Y397 364 aa28.66■■■□□ 2.18
SMAD6-202ENST00000557916 MYH9P35579 1960 aaKnown RBP28.66■■■□□ 2.18
SMAD6-202ENST00000557916 RAG1P15918 1043 aa28.65■■■□□ 2.18
SMAD6-202ENST00000557916 PTK7Q13308 1070 aa28.65■■■□□ 2.18
SMAD6-202ENST00000557916 XKR3Q5GH77 459 aa28.65■■■□□ 2.18
SMAD6-202ENST00000557916 MARCH8Q5T0T0 291 aa28.65■■■□□ 2.18
SMAD6-202ENST00000557916 IGSF22Q8N9C0 903 aa28.65■■■□□ 2.18
SMAD6-202ENST00000557916 PPP1R12CQ9BZL4 782 aa28.65■■■□□ 2.18
SMAD6-202ENST00000557916 HIPK3Q9H422 1215 aa28.65■■■□□ 2.18
SMAD6-202ENST00000557916 ZSWIM4Q9H7M6 989 aa28.65■■■□□ 2.18
SMAD6-202ENST00000557916 PTPAQ15257 358 aa28.64■■■□□ 2.18
SMAD6-202ENST00000557916 FOXD4L6Q3SYB3 417 aaPredicted RBP28.64■■■□□ 2.18
SMAD6-202ENST00000557916 FOXD4L3Q6VB84 417 aaPredicted RBP28.64■■■□□ 2.18
SMAD6-202ENST00000557916 SERINC5Q86VE9 423 aa28.64■■■□□ 2.18
SMAD6-202ENST00000557916 NOC4LQ9BVI4 516 aaKnown RBP28.64■■■□□ 2.18
SMAD6-202ENST00000557916 PCDH10Q9P2E7 1040 aa28.64■■■□□ 2.18
SMAD6-202ENST00000557916 WRAP73Q9P2S5 460 aaPredicted RBP28.64■■■□□ 2.18
SMAD6-202ENST00000557916 TUBE1Q9UJT0 475 aa28.64■■■□□ 2.18
SMAD6-202ENST00000557916 COL1A2P08123 1366 aa28.64■■■□□ 2.18
SMAD6-202ENST00000557916 VWA3AA6NCI4 1184 aa28.63■■■□□ 2.17
SMAD6-202ENST00000557916 DDX11L8A8MPP1 907 aa28.63■■■□□ 2.17
SMAD6-202ENST00000557916 STBD1O95210 358 aa28.63■■■□□ 2.17
SMAD6-202ENST00000557916 ITGB8P26012 769 aa28.63■■■□□ 2.17
SMAD6-202ENST00000557916 C4orf19Q8IY42 314 aa28.63■■■□□ 2.17
SMAD6-202ENST00000557916 SEPT9Q9UHD8 586 aaPredicted RBP28.63■■■□□ 2.17
SMAD6-202ENST00000557916 WDR81Q562E7 1941 aa28.63■■■□□ 2.17
SMAD6-202ENST00000557916 MBLAC1A4D2B0 266 aaPredicted RBP28.62■■■□□ 2.17
SMAD6-202ENST00000557916 ZBTB42B2RXF5 422 aa28.62■■■□□ 2.17
SMAD6-202ENST00000557916 TIMP1P01033 207 aa28.62■■■□□ 2.17
SMAD6-202ENST00000557916 DHX38Q92620 1227 aaKnown RBP28.62■■■□□ 2.17
SMAD6-202ENST00000557916 NIFKQ9BYG3 293 aaKnown RBP28.62■■■□□ 2.17
SMAD6-202ENST00000557916 TFIP11Q9UBB9 837 aaKnown RBP28.62■■■□□ 2.17
SMAD6-202ENST00000557916 BFSP2Q13515 415 aa28.61■■■□□ 2.17
SMAD6-202ENST00000557916 CCDC155Q8N6L0 562 aa28.61■■■□□ 2.17
SMAD6-202ENST00000557916 CAGE1Q8TC20 777 aa28.61■■■□□ 2.17
SMAD6-202ENST00000557916 ZBTB10Q96DT7 871 aa28.61■■■□□ 2.17
SMAD6-202ENST00000557916 POLR3CQ9BUI4 534 aaPredicted RBP28.61■■■□□ 2.17
SMAD6-202ENST00000557916 TUFT1Q9NNX1 390 aa28.61■■■□□ 2.17
SMAD6-202ENST00000557916 STK24Q9Y6E0 443 aa28.61■■■□□ 2.17
SMAD6-202ENST00000557916 KAT6AQ92794 2004 aa28.61■■■□□ 2.17
SMAD6-202ENST00000557916 TRIP12Q14669 1992 aaPredicted RBP28.61■■■□□ 2.17
SMAD6-202ENST00000557916 TMEM150BA6NC51 233 aa28.6■■■□□ 2.17
SMAD6-202ENST00000557916 MED24O75448 989 aa28.6■■■□□ 2.17
SMAD6-202ENST00000557916 SPATA31C1P0DKV0 1188 aa28.6■■■□□ 2.17
SMAD6-202ENST00000557916 KLRC1P26715 233 aa28.6■■■□□ 2.17
SMAD6-202ENST00000557916 CYP2C18P33260 490 aa28.6■■■□□ 2.17
SMAD6-202ENST00000557916 HAUS3Q68CZ6 603 aa28.6■■■□□ 2.17
SMAD6-202ENST00000557916 MTHFD1LQ6UB35 978 aa28.6■■■□□ 2.17
SMAD6-202ENST00000557916 ANO5Q75V66 913 aa28.6■■■□□ 2.17
SMAD6-202ENST00000557916 CATSPER3Q86XQ3 398 aa28.6■■■□□ 2.17
SMAD6-202ENST00000557916 WNT8BQ93098 351 aa28.6■■■□□ 2.17
SMAD6-202ENST00000557916 TSHZ2Q9NRE2 1034 aa28.6■■■□□ 2.17
SMAD6-202ENST00000557916 UMODL1Q5DID0 1318 aa28.6■■■□□ 2.17
SMAD6-202ENST00000557916 CEP290O15078 2479 aa28.6■■■□□ 2.17
SMAD6-202ENST00000557916 PP2D1A8MPX8 630 aa28.6■■■□□ 2.17
SMAD6-202ENST00000557916 PITPNM1O00562 1244 aa28.6■■■□□ 2.17
SMAD6-202ENST00000557916 LYPLA2O95372 231 aa28.6■■■□□ 2.17
SMAD6-202ENST00000557916 RPA1P27694 616 aa28.6■■■□□ 2.17
SMAD6-202ENST00000557916 MARCKSP29966 332 aaPredicted RBP28.6■■■□□ 2.17
SMAD6-202ENST00000557916 YWHABP31946 246 aaKnown RBP28.6■■■□□ 2.17
SMAD6-202ENST00000557916 DDIT3P35638 169 aa28.6■■■□□ 2.17
SMAD6-202ENST00000557916 CCT6AP40227 531 aaKnown RBP28.6■■■□□ 2.17
SMAD6-202ENST00000557916 NASPP49321 788 aaPredicted RBP28.6■■■□□ 2.17
SMAD6-202ENST00000557916 SLC39A14Q15043 492 aa28.6■■■□□ 2.17
SMAD6-202ENST00000557916 TAF2Q6P1X5 1199 aa28.6■■■□□ 2.17
SMAD6-202ENST00000557916 RUFY4Q6ZNE9 571 aa28.6■■■□□ 2.17
SMAD6-202ENST00000557916 RETREG2Q8NC44 543 aa28.6■■■□□ 2.17
SMAD6-202ENST00000557916 BADQ92934 168 aa28.6■■■□□ 2.17
SMAD6-202ENST00000557916 LBHD1Q9BQE6 289 aaPredicted RBP28.6■■■□□ 2.17
SMAD6-202ENST00000557916 STK38Q15208 465 aa28.59■■■□□ 2.17
SMAD6-202ENST00000557916 TRIM71Q2Q1W2 868 aaKnown RBP28.59■■■□□ 2.17
SMAD6-202ENST00000557916 MTERF2Q49AM1 385 aa28.59■■■□□ 2.17
SMAD6-202ENST00000557916 KRT79Q5XKE5 535 aa28.59■■■□□ 2.17
SMAD6-202ENST00000557916 OTUD6AQ7L8S5 288 aa28.59■■■□□ 2.17
SMAD6-202ENST00000557916 SNX29Q8TEQ0 813 aa28.59■■■□□ 2.17
SMAD6-202ENST00000557916 SH2D3AQ9BRG2 576 aa28.59■■■□□ 2.17
SMAD6-202ENST00000557916 RBM19Q9Y4C8 960 aaKnown RBP28.59■■■□□ 2.17
SMAD6-202ENST00000557916 PCDHA2Q9Y5H9 948 aa28.59■■■□□ 2.17
SMAD6-202ENST00000557916 ZBTB39O15060 712 aa28.58■■■□□ 2.17
SMAD6-202ENST00000557916 C22orf31O95567 290 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms