RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 WDR64B1ANS9 1081 aa14.11□□□□□ -0.15
SLIRP-211ENST00000557623 TBX3O15119 743 aa14.11□□□□□ -0.15
SLIRP-211ENST00000557623 IQCF3P0C7M6 154 aa14.11□□□□□ -0.15
SLIRP-211ENST00000557623 SELPP16109 830 aa14.11□□□□□ -0.15
SLIRP-211ENST00000557623 JAK3P52333 1124 aa14.11□□□□□ -0.15
SLIRP-211ENST00000557623 ZNF200P98182 395 aaPredicted RBP14.11□□□□□ -0.15
SLIRP-211ENST00000557623 GUCY1B3Q02153 619 aa14.11□□□□□ -0.15
SLIRP-211ENST00000557623 PPFIA1Q13136 1202 aa14.11□□□□□ -0.15
SLIRP-211ENST00000557623 EARS2Q5JPH6 523 aaKnown RBP14.11□□□□□ -0.15
SLIRP-211ENST00000557623 RDM1Q8NG50 284 aa14.11□□□□□ -0.15
SLIRP-211ENST00000557623 ETNPPLQ8TBG4 499 aa14.11□□□□□ -0.15
SLIRP-211ENST00000557623 LMBR1Q8WVP7 490 aa14.11□□□□□ -0.15
SLIRP-211ENST00000557623 SCLYQ96I15 445 aa14.11□□□□□ -0.15
SLIRP-211ENST00000557623 MTIF3Q9H2K0 278 aaKnown RBP14.11□□□□□ -0.15
SLIRP-211ENST00000557623 FOXP1Q9H334 677 aaPredicted RBP14.11□□□□□ -0.15
SLIRP-211ENST00000557623 SETD4Q9NVD3 440 aa14.11□□□□□ -0.15
SLIRP-211ENST00000557623 POTEB3A0JP26 581 aa14.1□□□□□ -0.15
SLIRP-211ENST00000557623 TREHO43280 583 aa14.1□□□□□ -0.15
SLIRP-211ENST00000557623 SLC37A4O43826 429 aa14.1□□□□□ -0.15
SLIRP-211ENST00000557623 MARCH6O60337 910 aa14.1□□□□□ -0.15
SLIRP-211ENST00000557623 CAND2O75155 1236 aa14.1□□□□□ -0.15
SLIRP-211ENST00000557623 PSMD10O75832 226 aa14.1□□□□□ -0.15
SLIRP-211ENST00000557623 BAG4O95429 457 aaKnown RBP14.1□□□□□ -0.15
SLIRP-211ENST00000557623 FGBP02675 491 aa14.1□□□□□ -0.15
SLIRP-211ENST00000557623 RPLP2P05387 115 aaKnown RBP14.1□□□□□ -0.15
SLIRP-211ENST00000557623 CKBP12277 381 aa14.1□□□□□ -0.15
SLIRP-211ENST00000557623 EPHB4P54760 987 aa14.1□□□□□ -0.15
SLIRP-211ENST00000557623 ADAM17P78536 824 aa14.1□□□□□ -0.15
SLIRP-211ENST00000557623 GNL2Q13823 731 aaKnown RBP14.1□□□□□ -0.15
SLIRP-211ENST00000557623 HIC1Q14526 733 aa14.1□□□□□ -0.15
SLIRP-211ENST00000557623 PLCB4Q15147 1175 aa14.1□□□□□ -0.15
SLIRP-211ENST00000557623 GRIK4Q16099 956 aa14.1□□□□□ -0.15
SLIRP-211ENST00000557623 TMEM240Q5SV17 173 aa14.1□□□□□ -0.15
SLIRP-211ENST00000557623 C9orf50Q5SZB4 431 aa14.1□□□□□ -0.15
SLIRP-211ENST00000557623 SWSAP1Q6NVH7 229 aa14.1□□□□□ -0.15
SLIRP-211ENST00000557623 TAF2Q6P1X5 1199 aa14.1□□□□□ -0.15
SLIRP-211ENST00000557623 PDXDC2PQ6P474 469 aa14.1□□□□□ -0.15
SLIRP-211ENST00000557623 POTEBQ6S5H4 581 aa14.1□□□□□ -0.15
SLIRP-211ENST00000557623 LRRC8DQ7L1W4 858 aa14.1□□□□□ -0.15
SLIRP-211ENST00000557623 CCDC60Q8IWA6 550 aaPredicted RBP14.1□□□□□ -0.15
SLIRP-211ENST00000557623 DHX38Q92620 1227 aaKnown RBP14.1□□□□□ -0.15
SLIRP-211ENST00000557623 RNPC3Q96LT9 517 aaKnown RBP14.1□□□□□ -0.15
SLIRP-211ENST00000557623 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.1□□□□□ -0.156e-7■■■□□ 18.5
SLIRP-211ENST00000557623 DISC1Q9NRI5 854 aa14.1□□□□□ -0.15
SLIRP-211ENST00000557623 EVPLQ92817 2033 aa14.1□□□□□ -0.15
SLIRP-211ENST00000557623 HBP1O60381 514 aa14.09□□□□□ -0.15
SLIRP-211ENST00000557623 ACRP10323 421 aa14.09□□□□□ -0.15
SLIRP-211ENST00000557623 INSRRP14616 1297 aa14.09□□□□□ -0.15
SLIRP-211ENST00000557623 THPOP40225 353 aa14.09□□□□□ -0.15
SLIRP-211ENST00000557623 FXR1P51114 621 aaKnown RBP eCLIP14.09□□□□□ -0.15
SLIRP-211ENST00000557623 TRIM71Q2Q1W2 868 aaKnown RBP14.09□□□□□ -0.15
SLIRP-211ENST00000557623 ZNF365Q70YC5 407 aa14.09□□□□□ -0.15
SLIRP-211ENST00000557623 MIER3Q7Z3K6 550 aa14.09□□□□□ -0.15
SLIRP-211ENST00000557623 CKAP2LQ8IYA6 745 aa14.09□□□□□ -0.15
SLIRP-211ENST00000557623 SLFN12Q8IYM2 578 aa14.09□□□□□ -0.15
SLIRP-211ENST00000557623 ATP8B4Q8TF62 1192 aa14.09□□□□□ -0.15
SLIRP-211ENST00000557623 UNC45AQ9H3U1 944 aa14.09□□□□□ -0.15
SLIRP-211ENST00000557623 KCNMB3Q9NPA1 279 aa14.09□□□□□ -0.15
SLIRP-211ENST00000557623 GABBR1Q9UBS5 961 aa14.09□□□□□ -0.15
SLIRP-211ENST00000557623 TUBE1Q9UJT0 475 aa14.09□□□□□ -0.15
SLIRP-211ENST00000557623 SMC3Q9UQE7 1217 aa14.09□□□□□ -0.15
SLIRP-211ENST00000557623 MAFBQ9Y5Q3 323 aaPredicted RBP14.09□□□□□ -0.15
SLIRP-211ENST00000557623 COL1A2P08123 1366 aa14.09□□□□□ -0.15
SLIRP-211ENST00000557623 LOXHD1Q8IVV2 1947 aa14.08□□□□□ -0.16
SLIRP-211ENST00000557623 MBLAC1A4D2B0 266 aaPredicted RBP14.08□□□□□ -0.16
SLIRP-211ENST00000557623 FAM205CA6NFA0 338 aa14.08□□□□□ -0.16
SLIRP-211ENST00000557623 CHMP2AO43633 222 aa14.08□□□□□ -0.16
SLIRP-211ENST00000557623 ACTN1P12814 892 aa14.08□□□□□ -0.16
SLIRP-211ENST00000557623 GJB2P29033 226 aa14.08□□□□□ -0.16
SLIRP-211ENST00000557623 ZNF618Q5T7W0 954 aa14.08□□□□□ -0.16
SLIRP-211ENST00000557623 C16orf59Q7L2K0 433 aa14.08□□□□□ -0.16
SLIRP-211ENST00000557623 DEFB128Q7Z7B8 93 aa14.08□□□□□ -0.16
SLIRP-211ENST00000557623 RSPH3Q86UC2 560 aa14.08□□□□□ -0.16
SLIRP-211ENST00000557623 HERVK_113Q902F9 699 aa14.08□□□□□ -0.16
SLIRP-211ENST00000557623 FAM167AQ96KS9 214 aa14.08□□□□□ -0.16
SLIRP-211ENST00000557623 CEP131Q9UPN4 1083 aa14.08□□□□□ -0.16
SLIRP-211ENST00000557623 IGSF9BQ9UPX0 1349 aa14.08□□□□□ -0.16
SLIRP-211ENST00000557623 TRIOBPQ9H2D6 2365 aa14.07□□□□□ -0.16
SLIRP-211ENST00000557623 RSPH10B2B2RC85 870 aa14.07□□□□□ -0.16
SLIRP-211ENST00000557623 RSPH10BP0C881 870 aa14.07□□□□□ -0.16
SLIRP-211ENST00000557623 IGBP1P78318 339 aa14.07□□□□□ -0.16
SLIRP-211ENST00000557623 PPP2R5CQ13362 524 aa14.07□□□□□ -0.16
SLIRP-211ENST00000557623 ORC2Q13416 577 aaPredicted RBP14.07□□□□□ -0.16
SLIRP-211ENST00000557623 CALCRLQ16602 461 aa14.07□□□□□ -0.16
SLIRP-211ENST00000557623 ZNF484Q5JVG2 852 aa14.07□□□□□ -0.16
SLIRP-211ENST00000557623 B3GNT9Q6UX72 402 aa14.07□□□□□ -0.16
SLIRP-211ENST00000557623 RPAINQ86UA6 219 aa14.07□□□□□ -0.16
SLIRP-211ENST00000557623 NOSTRINQ8IVI9 506 aa14.07□□□□□ -0.16
SLIRP-211ENST00000557623 TET1Q8NFU7 2136 aa14.07□□□□□ -0.16
SLIRP-211ENST00000557623 WNT8BQ93098 351 aa14.07□□□□□ -0.16
SLIRP-211ENST00000557623 GJA10Q969M2 543 aa14.07□□□□□ -0.16
SLIRP-211ENST00000557623 FTOQ9C0B1 505 aaKnown RBP eCLIP14.07□□□□□ -0.16
SLIRP-211ENST00000557623 NRBP2Q9NSY0 501 aa14.07□□□□□ -0.16
SLIRP-211ENST00000557623 NOL7Q9UMY1 257 aaKnown RBP14.07□□□□□ -0.16
SLIRP-211ENST00000557623 PCDHA2Q9Y5H9 948 aa14.07□□□□□ -0.16
SLIRP-211ENST00000557623 SIP14410 1827 aa14.06□□□□□ -0.16
SLIRP-211ENST00000557623 GBF1Q92538 1859 aa14.06□□□□□ -0.16
SLIRP-211ENST00000557623 H3BQV1 296 aa14.06□□□□□ -0.16
SLIRP-211ENST00000557623 NEMFO60524 1076 aa14.06□□□□□ -0.16
SLIRP-211ENST00000557623 DKC1O60832 514 aaKnown RBP eCLIP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms