RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 PUF60Q9UHX1 559 aaKnown RBP3.98□□□□□ -1.77
TRAV28-201ENST00000557548 MSRAQ9UJ68 235 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 DSEQ9UL01 958 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 DNM3Q9UQ16 869 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 COA3Q9Y2R0 106 aaPredicted RBP3.98□□□□□ -1.77
TRAV28-201ENST00000557548 B3GALT1Q9Y5Z6 326 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 SH3BP5O60239 455 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 PPP1R11O60927 126 aaPredicted RBP3.97□□□□□ -1.77
TRAV28-201ENST00000557548 FUCA1P04066 466 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 F13BP05160 661 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 CLEC2LP0C7M8 214 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 FSTP19883 344 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 AGXTP21549 392 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 HTR3AP46098 478 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 CEBPAP49715 358 aaPredicted RBP3.97□□□□□ -1.77
TRAV28-201ENST00000557548 CLCN7P51798 805 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 USP14P54578 494 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 CYP27A1Q02318 531 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 ADCY1Q08828 1119 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 RALBP1Q15311 655 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 SEC23AQ15436 765 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 CT83Q5H943 113 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 DUSP27Q5VZP5 1158 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 HLA-DQA1Q5Y7H0 255 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 PRR23CQ6ZRP0 262 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 THAP5Q7Z6K1 395 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 MIER2Q8N344 545 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 ZBTB34Q8NCN2 500 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 DLG3Q92796 817 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 ACAP3Q96P50 834 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 SLC2A13Q96QE2 648 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 ORAI2Q96SN7 254 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 ACO2Q99798 780 aaKnown RBP3.97□□□□□ -1.77
TRAV28-201ENST00000557548 GTPBP4Q9BZE4 634 aaKnown RBP3.97□□□□□ -1.77
TRAV28-201ENST00000557548 RNF38Q9H0F5 515 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 LRRC4CQ9HCJ2 640 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 ACSS2Q9NR19 701 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 SEMA3GQ9NS98 782 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 BSDC1Q9NW68 430 aaPredicted RBP3.97□□□□□ -1.77
TRAV28-201ENST00000557548 PHTF1Q9UMS5 762 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 EDARQ9UNE0 448 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 PLAGL2Q9UPG8 496 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 RWDD3Q9Y3V2 267 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 GPR45Q9Y5Y3 372 aa3.97□□□□□ -1.77
TRAV28-201ENST00000557548 TPP1O14773 563 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 CLASP2O75122 1294 aaKnown RBP3.96□□□□□ -1.78
TRAV28-201ENST00000557548 DGKIO75912 1065 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 WNT11O96014 354 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 ESR1P03372 595 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 CYP17A1P05093 508 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 RHCEP18577 417 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 ENPP1P22413 925 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 AKAP5P24588 427 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 MTNR1BP49286 362 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 FXR1P51114 621 aaKnown RBP eCLIP3.96□□□□□ -1.78
TRAV28-201ENST00000557548 ADKP55263 362 aaKnown RBP3.96□□□□□ -1.78
TRAV28-201ENST00000557548 ZNF280AP59817 542 aaPredicted RBP3.96□□□□□ -1.78
TRAV28-201ENST00000557548 RHDQ02161 417 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 KIF23Q02241 960 aaPredicted RBP3.96□□□□□ -1.78
TRAV28-201ENST00000557548 LLGL1Q15334 1064 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 HSP90AB4PQ58FF6 505 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 FAM83BQ5T0W9 1011 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 ERAP2Q6P179 960 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 CC2D1AQ6P1N0 951 aaPredicted RBP3.96□□□□□ -1.78
TRAV28-201ENST00000557548 CHST15Q7LFX5 561 aaPredicted RBP3.96□□□□□ -1.78
TRAV28-201ENST00000557548 TMPRSS7Q7RTY8 843 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 CXorf67Q86X51 503 aaPredicted RBP3.96□□□□□ -1.78
TRAV28-201ENST00000557548 RBM12BQ8IXT5 1001 aaKnown RBP3.96□□□□□ -1.78
TRAV28-201ENST00000557548 ZZZ3Q8IYH5 903 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 GRAMD1CQ8IYS0 662 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 UHMK1Q8TAS1 419 aaKnown RBP3.96□□□□□ -1.78
TRAV28-201ENST00000557548 PLEKHO2Q8TD55 490 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 DIS3LQ8TF46 1054 aaKnown RBP3.96□□□□□ -1.78
TRAV28-201ENST00000557548 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.96□□□□□ -1.78
TRAV28-201ENST00000557548 HPS3Q969F9 1004 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 GJA10Q969M2 543 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 EAF2Q96CJ1 260 aaPredicted RBP3.96□□□□□ -1.78
TRAV28-201ENST00000557548 ZNF496Q96IT1 587 aaPredicted RBP3.96□□□□□ -1.78
TRAV28-201ENST00000557548 JMJD8Q96S16 334 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 ANO3Q9BYT9 981 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 UBA5Q9GZZ9 404 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 SEMA4AQ9H3S1 761 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 ATP13A1Q9HD20 1204 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 ZNF277Q9NRM2 450 aaPredicted RBP3.96□□□□□ -1.78
TRAV28-201ENST00000557548 KCNH7Q9NS40 1196 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 STOML1Q9UBI4 398 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 FBLN5Q9UBX5 448 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 SERPINB13Q9UIV8 391 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 PTPN22Q9Y2R2 807 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 RAXQ9Y2V3 346 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 ATP23Q9Y6H3 246 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 X6R8D5 127 aa3.96□□□□□ -1.78
TRAV28-201ENST00000557548 PITPNM2Q9BZ72 1349 aa3.95□□□□□ -1.78
TRAV28-201ENST00000557548 KRIT1O00522 736 aa3.95□□□□□ -1.78
TRAV28-201ENST00000557548 NRDCO43847 1150 aa3.95□□□□□ -1.78
TRAV28-201ENST00000557548 NDUFS2O75306 463 aa3.95□□□□□ -1.78
TRAV28-201ENST00000557548 TCEA3O75764 348 aa3.95□□□□□ -1.78
TRAV28-201ENST00000557548 TRAPPC10P48553 1259 aa3.95□□□□□ -1.78
TRAV28-201ENST00000557548 MANFP55145 182 aaKnown RBP3.95□□□□□ -1.78
TRAV28-201ENST00000557548 EPHA7Q15375 998 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms